SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp68080_c0_seq2
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_filamin-A_isoform_X1_[Bombyx_mori]
Ontology
GO:0001664 F G protein-coupled receptor binding
GO:0001948 F protein binding
GO:0002576 P platelet degranulation
GO:0003779 F actin binding
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0005886 C plasma membrane
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0005938 C cell cortex
GO:0007195 P adenylate cyclase-inhibiting dopamine receptor signaling pathway
GO:0008134 F transcription factor binding
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0016479 P negative regulation of transcription by RNA polymerase I
GO:0017048 F small GTPase binding
GO:0017160 F small GTPase binding
GO:0019900 F kinase binding
GO:0030030 P cell projection organization
GO:0030168 P platelet activation
GO:0030334 P regulation of cell migration
GO:0030863 C cortical cytoskeleton
GO:0031267 F small GTPase binding
GO:0031523 C Myb complex
GO:0031532 P actin cytoskeleton reorganization
GO:0031852 F mu-type opioid receptor binding
GO:0031941 C filamentous actin
GO:0032403 F protein-containing complex binding
GO:0034329 P cell junction assembly
GO:0034394 P protein localization to cell surface
GO:0034988 F Fc-gamma receptor I complex binding
GO:0042177 P negative regulation of protein catabolic process
GO:0042384 P cilium assembly
GO:0042789 P mRNA transcription by RNA polymerase II
GO:0042803 F protein homodimerization activity
GO:0042993 P obsolete positive regulation of transcription factor import into nucleus
GO:0043025 C neuronal cell body
GO:0043066 P negative regulation of apoptotic process
GO:0043113 P receptor clustering
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043198 C dendritic shaft
GO:0043234 C protein-containing complex
GO:0043433 P negative regulation of DNA-binding transcription factor activity
GO:0044319 P wound healing, spreading of cells
GO:0044822 F RNA binding
GO:0045184 P establishment of protein localization
GO:0046332 F SMAD binding
GO:0048365 F small GTPase binding
GO:0048471 C perinuclear region of cytoplasm
GO:0050821 P protein stabilization
GO:0051015 F actin filament binding
GO:0051020 F GTPase binding
GO:0051220 P cytoplasmic sequestering of protein
GO:0051764 P actin crosslink formation
GO:0070062 C extracellular exosome
GO:0070527 P platelet aggregation
GO:0071526 P semaphorin-plexin signaling pathway
GO:0090307 P mitotic spindle assembly
GO:0097440 C apical dendrite
GO:1900026 P positive regulation of substrate adhesion-dependent cell spreading
GO:2001046 P positive regulation of integrin-mediated signaling pathway
Transcript
Level		FPKM:12.26 TPM:21.39
ORF EntryO_BomoEE15451_complete:A_BomoEE_comp68080_c0_seq2
Sequence
(Nucleotide)
TTTTTCTTTTTTTTTTTTTGTAATAAAAATTAATTTATTAAAAATTAGTAACTAGATATA
CTTTTATGTGGTCAAATTCACTTCACAAAATTATATAGAATTTGAGCACATAAAACAATA
AACAGAGTAAGTACAATGTATATTAGTTGAAATATTAAGTTAAAATATTTTATACCTAAA
AAAGTATTAATAAATTATTAACAAAAAAAGTATAGATTTCGTTTATTTTTGGAATGCAAT
ACATGTATCATTAAAATGTTTATTAAATTATTCTTGTCCAATAATATCTTCATCGTTTAA
TAAATTTATAAAATATTCTACATCTTTAGAAAAATAGAACAACGAAAAATATTAAATGCT
TATTTCAAAATTTCGTCGCTTTTTTTCTATTTTGGCAACCTATTTTGCAATTTAGAATGT
CTACTTATCATGGCCATGTAATTTTGCTATCATTTATTAAAAACAAATTATTTCTGAACT
TTAAAATAGTTCCGGAATTATGAGAAACTCTTTCGTCAATAAAATCTATATCGAATAGGT
CACCCTATAATATCGGTGTAACTAATCTGTGTATTTAATATGCATTGATCCTTTTATATT
TATATATTAACGTGAATCCCATAGACATATATTTGAACATTATCACTTATTGAGTAGATA
GGAAGTATACTGAAAAGTTCTTTCTCTAACTGAAATGTTGAAGTGAAGGAAAATCGAACT
ACAGTATTAACTTAAATATTTTTTTACTAAGTAATATTATGGTATTTTGAGACTATATTA
CTGTAAATTGGCGTTGACACATTTTTGTAATAATTCTAATTGGTAAAATAGTATTTACAT
ATGAATATTAGGACGAGCTGCGTATTGGGAAAGCGCTTTCTAATAGATATGATGTAAAAT
ATGTGAAACATTGTATGGATTATTTGTTTATATTATCAGCTGTTTGTATACATTTTTTTA
CAGTTGAAATTGTAATATCAGTTTTATCACATTTTCTAAGACTCATGAATTCAAAGAAAT
GTGTCAACGACTACACAGCAGTGTGAAGACAAATGAAGTGTAGGCGAAGCATGTTTTGTT
ATGTAGTGGTAGCCTGCATGTATCGGCGTAGTTCCTCCTGGGTGTCGAAGATCATGACTG
GGAAAGGCGAACCGGGAACATGGCGTCCGGCCCAACGGACTTCGACGCGGTAATCGCCCG
GCTCCGTCGGCGAGAACTTGCAGAGTATGGTGCGGTCCTTTTGGCTCTCGCGTTGCATCT
CGACCCGGAAGGCGCCCTTGGGTCCCCGTACGCGGACGGTGAGCTGCCCGGCGCCGGCTC
CGCGCGTGTCGCACACGAACCGCGATTGGAACGACGCCAGCACACCCGGCTCCACGCCCG
GGCCGTACACGCGGACCTTTGAAGGGTCTGGAGCTCCGGCCACTTTTAGTACAAACGGCG
AGCCCGGCACGTGTTCACCAGCGAATTGTATGCTCAGCACGTGTCGTCCAGCCTCCGCCG
GTTTCACATTTAGTGTGAACGTACCGTCGCCGTGTTCGTATAGCTCACAGTATGCTACCT
TATTAGGTCCAGTACAATGGGCCGTTAGTTCCCCGGGACCTGCTCGTCTGGTATCGATCC
AGGATCGGATCTCCCTCCCCACAACACCGCCAGTCAGTCCGGCTCCCGAACATACCACAC
GTGATGCATCACCACTTTCCGAACCGGTTGCTACGTTCACCGTTAGAGGACACCCTTTGA
CTAATCTCCCAGCCCACAAAACTCGTAGTTGATGGTCTCCAGGTCGCCTTGGTGTGTAAG
TAGCTCTCCACAGTCCAGGCCCGGCGGGCGCGAGCGCGACCGGCACGACGTCACCGTCCG
GCGTCAAAAGTGAAGCTTCAGGCGCTCCCGGACCAGCTGCACTACCATCGATAGTGAAGA
CAGCGGGTGTGTGAGGTGCCGCATGCGCCAATCCTCTGCCAGCAAGAGTTACTCTGTCTG
CAGTGTTGCCAGATGCGACTAGAGCTTTTCTAGGAGCACCAGCAACAAGCGCTCCGTTGT
AAGAAAGTTCAAACTCTTGTTCTCCGCTGATACCTTCAGCTGCGACGAGAGTGACTACTG
ATCGTCCGGATACTGTTTCTACACGTTGATGCCTCCCAGCGAGTAAACATTCTAGTGTAC
CGGGCCCAGCATTGCTCGTGTCTAGGACTAGCTTGGAAGGAGCTCGCACTCGTCCAGAGT
TATCAGTTCCCCATCCTCCGACTGGTACTATGGCTGATGTGTCTATTACTTTGACGGAGA
ACGGACTTCCTGGTAGCGGTCCAGTGGATGTGAATATCCTGACTTCGTACAAACCGACGA
CCAGAGGGATGTAGGCGCAGAGCCACTCGCGTGGCGCACCCGACAGCACTCTGCACTCTA
GCAACCCCGAGTCTGGATTGTCTTCTTTGTCATTTGATAATCTCTCCACCTCGACAGTTG
GTGACGTATCTTCAGCACAGTGTATAGTGAAGGCCGCTTCCTTGCCGACATGAGCATGCG
CAAGTCCGGTACCTGAACATTTGGCGGCAGAACTGCTTCTACCACTTAAAACTCCCAAAG
ATATTGGACTGCCTAATACTGGAGCACCTCCATAGGTGATGTAAATCCTGTAATGTGAGG
GTACAGTGGGACGCAATCGCACTCTGTGCGTGTGTCCATCCTCTCGGATGTCAACGGGCA
GTCGGATGCGACGCTCACCCATCGCTTCACACACCACGTCTAATTCACCAACTCCCGCGT
CCTTTGTTACAACACTGAAATTGATTGGCGTTTGTGCAACAATATTTCCAGTTGGTAAAC
CAGAAACTATCACTCTGTTTGGGTCGAAGGACTCGCATGTGTATGGACTCCCGGATACCG
GCTTGGATAGATGTAAAACCTCTATAGTACTCTGTCCAACTTCATTAATAGTGAATTCTG
CTTGCAACAAGCCAGACTTGGTTTGATAACATCTTACGGGCAGTGCTCGAGAGCCAGGTC
CGGAGACGACCACGTCGAATTCCCGAGCAGGTCGACCCAGGGTGTCGATACTGAATGATG
CCACTTTATTAACCTGAGCTTGGTATAAACCTAGACCAGAAGCTGCCACCTCTTGTCCAT
GGTGTGGTGGATGCACATCGACGAGTAACGGTTCTCTGTCGATTGGCGCGCCGCTCCACA
GCAGCGTCAGGCGGTGAGGGGCTGCACGCGCTGGGTGCCACACGACCTCGTGCCGTGATC
CCCCGCGCCGACGCACCGAGTGGGGGACCGTCGCACCGCCGCACGACACACGACCAGACA
GTCGACCGGCACCCGCGCCATGCGTGCTCACGGTCAATATAGCTGGTCGGTGAACCACTG
CATTTCCAATAGACAACACCTTTACAGCAGTGGCATCAACAGCCTCGACTTCCGCCACCG
GTCCCTTTGCACTTCTGACAACATATCTACCAACACGACTCGCAGGAAACGTTAGGAGAC
CAGTGTCCTCGAGCTGTGCATCAGAAACACGCACTCCAGTAGGAGATATTACGTCTACGT
CTGAAAGACTCTCGTCGATCTCCACTGTTGCAACTCCACCAATTTGTACATAAGTGTGTG
GTTCGTTGACGCGGCAAATGAATGGACTACCAGGAACTGCTTGTTCATTGAACGTGACTG
ACACTCGATGAGGCTCTCGAGAAACTGGCACAAAAGTCACATCGTACAGACCACGGGCCA
CAGCCACTACCTCAGCCTTCACTGTTGTAGTGGGTGTAGATACCACCAGTTCCAGTGTTC
CTTCACCCGCGCCTGCTGCATCCACACTGAATGTCACTGGCTTACCAACTTCTACACCTC
TCTCTTCTTCCACACCTTCATCCAAACTCAGCCCTTCTAATGTACCCTCCAGTTCTCCAG
GTCCAAGGCCGGTGACTCTGACGCGGCGTACATCGTACACGTTGCATGTGAAAGGAGAGC
CCGGCACGTGTCGTCCCGCGCACGTCACTTGCACACTGTGTCGTCCAACAGCCTCCGGAG
TGTAAGTTGCTGTATAGCGACCATCACCTAATGGCGTTACACGGGTTCGTACGTTGGTCC
CACCCGGGCCGGTCACGTAAATTGTGGGCTCAGCTGTCTGGAAGCCGGTGAGATGTATGT
CGGCAGGGTCACCGCGCGGTGCCGACACTAAGCCGGCACCGGATGCGCGCGCGTCCGGCG
CCGCGGTCGGTGCGGACACGGCACACGTGAACGGCGAGCCCGGAACCGCGTGACCGTTGA
ACCGGACCGACAGCGTGTGCGGCGCCGCTTCTACCGGCTTGAAGTTCACCTTGAATCTCG
CATTTCCTTCACTCTGCACATAATTAGGCACGTTTCGACCGTTAACGGCTACGATAATTT
CTAAGTTGCCGGCACCAGCATGTGATGCGTTGATGGTGAAGGACACAGGTCTTCCGACGA
CACCCGGCGAGATGTCAGTGACGCTGACCCGCGCGGCGCTGTACGCCTTCACCAAGAACG
GACTACCCTCCACGTGACCGCCCGAAGCGCCGGCGCGAACCTCAATACTGTGATCTCCTA
CATCAACAGGCACAAATGAGATGGTGTACCGTTTGCTCGCCTCGTTTTCACCTACGGTTT
CTTCAGCAGATACTTGCACAGTGACGGGTCTCCTGGCGGGGCCAAGCACCTCGACGTGCG
GTGACGTAGGCGAGTCGACGCTGAACGTATACGCGTCACCAACCGACACCTTCTCCGGAG
GCTCGCCCGATCCTGCACCGATCACGCGCGCTGGCGCCGACACGTGACACACGAATGGAC
TGCCAGGCACATGATCGCCGTTGAAACGCAGTTCAACGGTGTGAGGCCTCGGATCCCGCG
GCGTGAAGCTGATGGCGTATGTGTGAGCTCCTTGCGCTGCCGCCGCAGTCGGTACCCGGC
CGCCATTCACCGTCACCTCTAAATTCCCAGGACCAGCGGCCATTGTCTCCACTAAAAAAG
TGACAGGTTTACCGACAGTACCGTGCGCCACATCTTTGACTCTTATAGCTGATACATCGT
ATACCTTTAGATGGAAGGGGCTGGCTGGAATGGGCACAGAGTCGATAAGAACGTTGAGTC
TGTGTTCCCCGACGGCGCGCGGCACGAACTCTGCTCGAAAGGCGGCAGGACCCGCCGAAG
ACACCGCCGCCGGCACCGACGCCCCATTAGGACCTTCCACATTGACTTCGATCTGGTCGA
GCGTGGCGGTGGCGTGGTGCAGCGTGAGCGCGGCGGGGTGGTGCAGCCGTGCGGGGCCCG
GGACAGACACACGGGCCGCCCCCCCTGCCCCTTCCGACACCGGCAACACTAGCGGACATC
CCGGTACTCGCATCTTATTGAAAGAAACATTGACAATGTGGTCGCACACTTCAGTCGGAG
TGAAGGACACGGTGAAGCGTGCATTTCCTTGTGGATGTACTTGCGTGGGAATGTTGAGTC
CCCGTGCGGAAACAGTGATTTCGAGGTTTCCTTCTCCAGCCTGCGCGGCGTCCACAGCCA
GTTGGACAGGTACTCCGACGCGGGCTGACGTTGCTCCTGTCACGCTCACCAGCTTCCCAT
CGTAGGCTTTGCACGTGAATGGTGTTCCGGGTACAGGTTGGTTGTTATAGTGAGCGGTCA
ATGTATGAGGTCCAACGTTTTTGGGTGTGAAACTCGCGACGAGCCCGGTGACGGCATCGC
CCGTGAGTCGCACGGGAACCTCTCCTCGAGGACCGCGCACCGTAACCGTCAATTCTCCAC
CCGATGAACCTTCTACTCTTACTGAACATGACGCTACGTCACCGACTGGTATTAATTCAA
CTTGCGAAGTATCGATGGTCACTCTCTGCGCCGGTGCTACTTGGAAGACGAATGGAGACG
ACGGAACGGGCTCACCGTTGAACTTGATGTCGACGCGGTGAGGAGACGCCGCCTCTGGTC
GCCAGTATACCAAACATTTTCCTCCTCCTACAACCTGTACATGATTCGGGACTTCTCCTT
CGTTAATAGAAATTTCCAACTGTCCCTCTCCAGCGGCGCTCGCGTCCACTTTAAATTGAC
ATTGTTGTCCGACGACGGCGTTGCCCAAGTCTGTGACCTTAATCAGACTCGCGTCATACA
CCTTCGCCACCAGCGGTCCGCCGGCCAGCTTATCATCTGCTATCGATACATCGATCAAAT
GCGTGCCGACCTCTTCAGGAGTGAACTCGATGCGGTACAGACCCGGACGTTCTGCCACGT
CCAGAACTCGGACGTTCACTGGACGTCTCGACGGAGATGTGACTGTTACTCCGACATCAT
TTTTAGTAAAAGTTGCAGAACCAGGAGATGTGGATATCTCGAAGACGGCGGGCACTCGTG
CGGGGATTAGTCTGGTCGGCTCTCCGCCACCGCCGCCCACCGGCCCCGCCATCACCTCGA
CCTTCCACGGGGAACTTATCGAGGGCGAAGTGACCTCCGTAGACAAGACCACGTCCCCTC
AGTAACAGACGCGATATCTAGGGCACTTTACTGACCGGATCAAAAGAAATCACAACAATA
ACACTCCGAAAACATTCACAGCTTCTAAAAATCCGTCACGGCAAACTTAAGCTCAACTGT
TCTTGTGTCACGAAGAACAGAGAGACACTTTGTTACTCGTGTCAATATTCAATGTATAGA
CGGTAGACGTTATGTACAACAAAATATCATTGTGACAGCGGGGAGGCGAAGCCTCTTTCG
TTCACGGACGCGG
(6733 bp)

- SilkBase 1999-2023 -