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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp67994_c0_seq2
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_putative_RNA-binding_protein_15_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
Transcript
Level		FPKM:21.05 TPM:36.72
ORF EntryO_BomoEE15073_complete:A_BomoEE_comp67994_c0_seq2
Sequence
(Nucleotide)
GCTGGACGTAACTTCTCGGGATCTTCCAAAAAGTCCTCTGAAAAAGTCTCAGTAAATATA
TACAGTAAATATATAAATATTGACCATTTTACTGAGATTTTATATCTCATTACATCTAAT
CCCATTTAATTTCATTTCATGTCAATTGATTGTTTCAAATTAATCAAATTCATTTCATTT
CGCTCTGTATCATTTTTCATAAAAAAGAATACACAAAAGATTAGACCGTATAGTATGATG
CCTTTGCCTTTACAGTTGGAAAAACAGAATTATTTAATGTCATTTTCATCTGTGACCCCA
TCCAATCCCAAAGGTCATATGATCTTAGTAAACAAAATAGTTTTCGGTTCAAAATGATAA
AATAATTTGTGAAGTTAAGTCGAAAAGTACAAAATTTTCATAAAACTATACATTATTAAA
TCAAAAACATAAAACTTAAAATTCGTAATTTTGGCTTTAAAGCTATGTTTATGTAAGAAA
TGTTTTAAAATTGTTAAAAATATAAATCGTGATTTTTTTATGAAACTCAATTACTCAACT
CAAAAACTCAACATTAAAAATCAATGGATAGAAACCAACTTCGACTGGACCACCCCAGTG
TCGCTATCACTGATGGAAATTATCGTACACTTTCGTATTAAGTTAGTTATGATTGTGCCC
ATTAACCTCGTCAGAGTTCGAATCTAGAATTTTCTAGATAGACCCATGTTTTATGTTCAA
TAATATTCAAATGTAAAGAAACACAAAAATTCATGGACAACTGTTGTTGAATTTGAATCA
AGATTTTAACTTTATTTGTACTCTTTAAGAAAAGGTTGAATTGTTTCTTTACATTTTTGA
TCTCAATTTCCATCTTTAATTTAGGTAATGCAATAGTAATTATAATGATAATGATATTAT
AATATTAATGATAATAGTAATTTAGGTAATTTTCCTTTTTTTTCGTATTAATGAATCACA
TTTATATTACATTATACCTTAGCTCATTTAGTGCATGGGATTTTTTATTTTTTATGTACC
ATACAACTGTAAGCATTAAAAAAATTCTATAAAGTTCAGAATTGTAAAGAACTATTTTTA
AAGTACACACAAATTACCAATACAGTGCCTACTGTGTTGTGTGAAATATATCTACAGACT
TACCCAGTTTCAGTTTTATATTATAATATGAAACACGTCAAATCACAAACAATACTGAGT
CAACATTTATATCACCATATTTGTAAATTGTAGAAAATTTGTCTTCAATTGACTCTAAAT
TTGGTAATTTTACTGTTAAAACCACAACACACCACTGACTTGTTGTTCCACTGTACATCC
TTTTATAATCATTTTTTTGCAAATTAATGGACATACCAAAACATAAATTCACAATACTTT
TTTTTTTGGAACACCTTAACATCACAAAACCACTAATGGATCAACTGCACTGGATATGTC
ACTTAATCACAAGGTTTAAAAAAACAACTTTCAAAATTAAAATAATCTATTTGTTTTGTT
CACACACTACACATCACCTAAATCATACACTGAATATTATACACTTAACTTTAAAAAAGT
AAGATAAACTTCTTTTAGTCGGATATCTAGCTGAACTAGCTTCTATACTGTACATTTTCA
TCAAAGTTAATTCTGATCACTGTGAGAACACAGCACTGCACAAATATTTAAACTTGCACA
TCTTATGCACCTCACATCACACACATCACAAGAATATAAAGTAAAAAGTGTAGAACAAAA
AACTTAAATTAAGAGTATATACCTACAAATAACAATACAATATACTAAAGCAGTGTTTGA
ATAATTAAGCAGTGCCACCTCGTACTACTACTATAACTAGGTGATCTTCCTTAAAACTCT
CTTCAGTTAAATTGTGACACGTTCTTTTGAGAAGGTCAGTTGAAAATTCACATGGAGGGA
AAGAATAAAGAACTCCAGTAGCTTCAGTCTCTTTGTTCAAAAGTGATATCACACCTGCTG
CTTCTTTTTGTTTAAGATATGATACCAAATTCCTCATTGGTCGTGTTTGTATCGAAACAT
CTTCATTGGTGACTACAGCAGTAGAACCAGACACACCCACAAAAATGGCATGAGAGCTAG
ATGTGGCAATACGTTTTTGAACATCATCTAACTTAGGTTGATCCAAACGTAATCTTTGTG
TGATTCTGAGCTGTTTTCTACCATCTTCATCTTTCATGAGACTATCAATAATTTCAGAGT
CACCGTCTGTTAAATGCAACTTAGTAGGAAACAATGAATTTTTGAGAATCAGTGCTCCAT
GCCAAATTGTAGTTGCTTTACGAACTAATTCTGCCATTGTTCGTGACGAAGATAGCATCC
CACTACTTCTACGCATTGATCCATCAGAGTCACTATCAGGTGATCTACGACGAGATCGTG
AGCGTGACCTATCGACTCCAGGCTCCCTTGATCCAGAACGACGCAAGCGACTCTCATATT
CTGAATCTAATGGAGCACGTCTCCATTCTTCGTCACGATAATCTCCTGTACCATGATAGA
CACCTCTGTAGGAGCCACGTCCACGGCCACGATGCCCACCTCTACCCCTATAAGTACCAT
AGCTATAACCATCCTCCCAAGAACTACCTTCATATCCCTCATATCCTTCAACAGGCCTAC
CATCTTCACCAACAGGTGCACTGTAAGGTTTAGGTCTATAGGGTCCACCTGTTCCAACGT
CTGCGAAATCAATACGCAAACGTCGCTCCGGTCCCCCTAAAGGAAAGCCCCGCATTTCTT
TGACAGCAGCTTGGGCTGCATCAATAGAGTCATATAAAATATAGGCATGAGGTTCACCCT
TCACATATTCAATCTTTTTAATGGCACCAAACCTATCAAATTCTCTCTCTAACTGTGCTA
CTGAAGTCCATGGTCCCAGGCCACCCACCCAGACACGTGTTGTGGGTGTAGCTTTGCCAT
AACCTATTTTACATTGAAATTTGCCAATGTATTGGCCTGATAATTCAACTTTGGCTCTGT
GTGCCATGTCCAAAGTTTGATAACGAACAAATGCAAAAGCATTTCCAGTACCTGGAGGAG
GTCTTTTAATGTCAATGTCCTCTACTATACCATAGCGTCCAAAAATTCGGCGTAACTCTT
CATCAGAAATGTTTATTTCTAAATTACCAGCGAAAAGAGTTCTTGTAGCTAATGGATCAT
CTTCAGGTTGAACATGGTGTAGGTAATTTGGAAATTTATCTTTTTTGTTCTCAATTTTCT
CAAATGGAGGATGGTGAGGCCGGGGCATGTATGGACGTGGCATATAATGGGGATGTGGAG
GGTGATGCATAGGTGGTCTGTGATGCATTGGAGGCCCATGAGGACCTGCCATGGGATACT
CATGCATAGGAGGGCGGAAATCTCTATGGTGAGGTGGCACTGTAGGAGGGATACCATAGG
CTCTCTCATCAGGAGGGGGACGACGTCTCTCTGGTACAGGAGACCAAGCGTATGAATAAG
GGCGATCATAGTCAGGAGGAGTTATACTACGAGGCCTCGGTCTGTACTCAGAACGTACAG
GTTCATAAACAGGATCAACAATAGCAACTTTATCATACAGTATTATCCTAGGCTTGGCAT
GTTTAGCGTCTCTCGCATCCTCTGCACTTCGGAAGCAGATGTAGGCTACTCTCTCATCCA
ACTCATGGGATATTTTTATACTAAAGTCACCATACTTCTTATATTCTCTATACAAAGTAT
CCTTGACAATCTCATCCGACGCTTTAGGGTGTAAAGCACTAACACATAGTACTTTGTAGT
AGCTGCGGACAGATTCATCTCGAGCATCACGAGAACGCACGTAATCATCGCGATGAGGTG
ACACATATCGACCGCGCGGGCTAGGGGAGCGTACTCGACGTCGTACTCGTTCCGGGCTTC
CACGCTCGTCAGAGCTATCGTCATACCTACCAATACTGCTGCGTGTCCGTTTTGATCGCG
GCATACTATCACGCGACGAACTTCGCTTCATATTGCGAATTTTCACCGTAATTCGATCTC
TATCTCTATCGCTACGCGGTAATCCAATCATGAAAGCTCACTTCGACGAACTACTATCCC
AAACGAATTACAAACACTAATCACTCAGCAGATCACTGAAAACCTCAATCTTGGACGAAC
TAATTCGTATTATTAAGTAGACAATTATTTTAAAATAATCACGTTCACTTCAACTTTATT
TAATGTAAATTTGAAATTAGAAGCGCTGATAAGCATCAAGAATATCGACCATTACATGGG
AATCTCACAAAATGGCAGTTTGGCTGAGGGTTGCCAAATGTGATTTCTGAATTTCTTGTA
CATATTTCCCCAAATTATTTTGCCGTTTCTTCTGAGTTGTATTATGTACGATAGGTACGC
TGTTTCGGTTCTGTAACCAGCTTTACGGGTAGCGGATTTTGTCCGATAAGTGTTTTTTGG
GTCTTCATCGAGTTGATCTTAAAACCAACTTTGGCGCTTCCAACTATATATCGTCCAGTT
TGGATTGCATGCAGACAACTTCATGATTAAAAAAACATTAGTCATCAGCATGGTCTAGAC
CATCCAATTCTTTGGACAACCCCCACATAACAAGTCACATCCATGCTACTGTCGAAATTG
CTATGATTTAATTAACTAATTGTTG
(4645 bp)

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