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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp67984_c0_seq6
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		PREDICTED:_28S_ribosomal_protein_S2,_mitochondrial-like_[Amyelois_transitella]
Ontology
GO:0002230 P positive regulation of defense response to virus by host
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
Transcript
Level		FPKM:3.08 TPM:5.37
ORF EntryO_BomoEE15006_complete:A_BomoEE_comp67984_c0_seq6
Sequence
(Nucleotide)
AACTATGTCTTTAGGCAGTGTGATGAACTCTGTTAGTCTCTAGTTAGTAAAGTCGCAGTT
GCGCGCGCGTCGCGAAGGAGGTTAGACGAGCGATACGCTCGCGACCTTTTGTAGTAACTG
ATAATGTAATCAACATTATATACTACTCCAGATGATCAATCACCTAACGCACTACAACAT
AAAATGGAGTATTACACATCAGATAGTTGTGACAGTGACTTCAGGGAGCAGAAAACACTC
GATTTATCCAATCAAATGATAGATACATTAAGTATCTCTGCTGAAATGAGAAGTATAGTG
GATGAAAAAGATTGTGCTGAAAGCTACGAGATAATATTACTGTACAACAACAGAATACAA
TCACTTCCAAATTTCCTAAACAGGTTTTGCAACTTGAAAATTTTGAATGTGAGCAACAAC
AGGCTGACTGTTTTACCAGATGTGTTTAAGAATTGTCCCCTCACGACTTTGGTAGCAAAA
CATAATCAACTCACTAACGAGTCACTTCCCAAATCATTTTATACTGCAAAGAATACTCTT
CGTGAACTGAACCTCAGTGGAAATCAGTTAAATTTATTCCCAGAGCAGATATTCGAATTG
ACACATCTGAAATATCTTTACCTAGGCAGTAATAAAATAGTTAACATACCAAAGGACATT
TGGAAATTAAGCGGTTTGCAAATACTATCACTTGGTGGTAACCAAATTATCGAAGTGCCC
GAGAACGTAGGTCACTTAACTTCACTACAAGCGTTGGTGCTCAGTGATAATTTGATCGAA
CAATTGCCAGCAAGCATCACAAAACTGAAGAATTTAAGATCTTTATTATTGCACAAGAAT
CGATTGAAAACTTTGCCTACACAAATTATTAAACTAAAATGCTTGACAGAGGTATGAATT
CAAATTTAATAAAAAAAAATCTAAAAAGGTGCCAATAATGCTAGTGAAAATACAATACCT
AACCAAATAATTTATAAAAAATATGTTTGAATACAATACAACTGTGTGGCTTGCAATGCA
CTTAAAGGAAAGTGGTTAACGCCGCCTAAGCAATGCTAAACGTAACTATAGCGCAATTGT
ACGGTTGAAGAAAGAATGTGTGTAATGCCCAGGGAAAACCGAAGAATGAAGAAAATTATA
CAGCTTTAACAATCAGAACATATTCGTTTTGTAAGCCCAGTGTATCGTGTAGCTACGGCA
AGTAGACAAATCCTGGGCAATAGTGAAGCTATTTTTGTGGTGGGAAGTATATAGCGACAG
CATAGAATCACACAAATTAGTCCTTAAAATTCATTAAAATGATTAATATTTTTAACTTTA
TTCCAAAGTATGCATGTATACTGTATGTGTTTTTTTAATTACAGCTCAGTCTTCGGGACA
ATCCCCTTGTAGTAAGATTCGTTAGAGACATGACTCTGCAGCCACCATCACTCTTAGAGC
TGGCTGGTCGCACTGTGAAACTTCACAACATTCCAATTGAAACTGGAGGTATTCCTAAGA
CATTGATCAATTATCTGCAAGCAGCCCAATGTTGTGTCAATCCAAAATGCAAAGGTATAA
TAGTAGTACTATTATTGTAACATATAAATTGTTTTTGTATTAGCTTGTGTTCAAATACGA
CCAAGCTACTTAAATAACAAATATACACTTTACAAGGTGGAACCCCGATGTGTTCACCAT
TGCGAACTTTTTAGGAAATACTGATACATGAATCATAATGGTGCAATACATGGTGGCATC
GTTTTTCAATTTTATTTCAATATGTGTTCATAAATTTATTTTGTGCATTCACTAGTCAAC
AGACCAGATGATTGCACAACAAACAATATTCTAAAGTTCTCCTCATTTCGAGTGTTTAGA
ATAACAAAATCGAAACGCACTCAAAACCATTTTATTTTTCATGAAATTTAACTTGTATAT
TGTGAGAGGAACAAATCAAATCAAATGATTTCCTGCGTGAGATTAAAGAATAAATTAACA
TGTAGGGTCTTAAAACGTTTGCTGGTTTTTTTTGTTATGGAGATATAAAATATTCAAATA
CTTTATATCACCATTAACAATACTTTTGTATGATATTTACCTATCACAACTAATTAACAT
ATTTGTTACAGGTGTCTTCTTTGACAACCGCGTAGAACACATCAAATTTGTAGATTTTTG
TGGAAAGTACAGGATTCCATTACTACAATATTTATGCAGTTCAAAATGTATTACTGGAAG
TTGGGAAAGCCGTGAGGTAGACAGTAATCCTCACCCACATATGATGCGAAAGGTTCTTCT
GGGTTAATTATGCCATAATGACATTATTAAGACCAGACAGATTAAAAATCACAAATTGTT
TTTCTTGCTATCATCTATTGTCAACTTGACGTTTTTAATTATTTTTATTTAGATTATTTG
TTGTACAATTTATATTACTTATGATTGTGTTGTATTGGGACAAAATATTTTTAAACTGTT
AAATATAATAATTATCATACACAGCATAATTAGATAAAACAAAAATTTACAGAAATAATA
TTTTTAAAACATTATGAGTAATATAATGAAAATGTTTACCAAGTTGTGATATTTAAAGAA
ATATAATAAACAGAATTTATTGTTAAATCAACTAATTTTCTTTTACAACAATGATGTTAC
TCTGTCTCCTGTAGAAACTTACGTCTTTCTTCCTTTCCTCTAATAATAGCACTTTTAAAT
AACTTACAGTAGAGCTCTATGGCTGTTGGGGAATCATCATTGCCAGGTACAGGGTATGAT
ACCAAATTAGGATTACAATTTGAGTCGACAATTCCAATTGTTGGTATTAACATTTTTGCA
CTATCTCTGACAGCTGTGTGCTGATTCAAAATATTATTCTGGGTGTTAAGAAATATACAT
AAGTCAGGTAATCTTGTTATAGCACCAAACTGCTGATTGGCATTTGTGAAGATACCACCT
CTCCAGAATCTTGTATGAGCATATTCTCCACATTCCATTGCTGTTTTTTCCACGATATGT
GCATTTAGTGAATTCCTATTAAAAAAACAAATGATTCCACCTCTGTATGCAATGTGGGCT
GTGAAATTAAGAGCTTTACGTAAATGTTCAGCTGTTGTATCCAAATCAAAAATGAGGTGT
CCAAGTCTTGAACCATATATGTATGATCTCATGTTATCATTAAGGGACCCTATTTTATGA
CCATAATGCACTCTTGCATCAAATAGGTCTTTTACTGTAAATAAATTATGTACACCAAAA
TAATCTGGGTAATCAAGAGGATTTTTCTGATTTTGTTGCACATCAATTACATTCTCTGGA
ATGACTTGTGGAGAAGTTGATGTGTATCTCAGAAGTGAAAATCCATATTTTGTATATCTA
CACCCTGTATTACTCAAAATCATTACGTTTCTTTTTGTCCTATTTATATAGGAAAAGGAA
ATCAATAGATGGGTTTGTTTTTAAAGTTTTTTTAGGTTATATTCATAATACATTTAGGTA
AATTTTTTTAAAGATTATATGGTCTGGTAGCGAGACTTTTAAGCCAGGATTTGAATCG
(3538 bp)

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