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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp67984_c0_seq2
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		PREDICTED:_leucine-rich_repeat-containing_protein_58-like_[Amyelois_transitella]
Ontology
GO:0002230 P positive regulation of defense response to virus by host
GO:0003735 F structural constituent of ribosome
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005763 C mitochondrial small ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0015935 C small ribosomal subunit
GO:0030529 C ribonucleoprotein complex
GO:0032543 P mitochondrial translation
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:0098792 P xenophagy
Transcript
Level		FPKM:10.62 TPM:18.51
ORF EntryO_BomoEE14999_complete:A_BomoEE_comp67984_c0_seq2
Sequence
(Nucleotide)
AACTATGTCTTTAGGCAGTGTGATGAACTCTGTTAGTCTCTAGTTAGTAAAGTCGCAGTT
GCGCGCGCGTCGCGAAGGAGGTTAGACGAGCGATACGCTCGCGACCTTTTGTAGTAACTG
ATAATGTAATCAACATTATATACTACTCCAGATGATCAATCACCTAACGCACTACAACAT
AAAATGGAGTATTACACATCAGATAGTTGTGACAGTGACTTCAGGGAGCAGAAAACACTC
GATTTATCCAATCAAATGATAGATACATTAAGTATCTCTGCTGAAATGAGAAGTATAGTG
GATGAAAAAGATTGTGCTGAAAGCTACGAGATAATATTACTGTACAACAACAGAATACAA
TCACTTCCAAATTTCCTAAACAGGTTTTGCAACTTGAAAATTTTGAATGTGAGCAACAAC
AGGCTGACTGTTTTACCAGATGTGTTTAAGAATTGTCCCCTCACGACTTTGGTAGCAAAA
CATAATCAACTCACTAACGAGTCACTTCCCAAATCATTTTATACTGCAAAGAATACTCTT
CGTGAACTGAACCTCAGTGGAAATCAGTTAAATTTATTCCCAGAGCAGATATTCGAATTG
ACACATCTGAAATATCTTTACCTAGGCAGTAATAAAATAGTTAACATACCAAAGGACATT
TGGAAATTAAGCGGTTTGCAAATACTATCACTTGGTGGTAACCAAATTATCGAAGTGCCC
GAGAACGTAGGTCACTTAACTTCACTACAAGCGTTGGTGCTCAGTGATAATTTGATCGAA
CAATTGCCAGCAAGCATCACAAAACTGAAGAATTTAAGATCTTTATTATTGCACAAGAAT
CGATTGAAAACTTTGCCTACACAAATTATTAAACTAAAATGCTTGACAGAGCTCAGTCTT
CGGGACAATCCCCTTGTAGTAAGATTCGTTAGAGACATGACTCTGCAGCCACCATCACTC
TTAGAGCTGGCTGGTCGCACTGTGAAACTTCACAACATTCCAATTGAAACTGGAGGTATT
CCTAAGACATTGATCAATTATCTGCAAGCAGCCCAATGTTGTGTCAATCCAAAATGCAAA
GGTGTCTTCTTTGACAACCGCGTAGAACACATCAAATTTGTAGATTTTTGTGGAAAGTAC
AGGATTCCATTACTACAATATTTATGCAGTTCAAAATGTATTACTGGAAGTTGGGAAAGC
CGTGAGGTAGACAGTAATCCTCACCCACATATGATGCGAAAGGTTCTTCTGGGTTAATTA
TGCCATAATGACATTATTAAGACCAGACAGATTAAAAATCACAAATTGTTTTTCTTGCTA
TCATCTATTGTCAACTTGACGTTTTTAATTATTTTTATTTAGATTATTTGTTGTACAATT
TATATTACTTATGATTGTGTTGTATTGGGACAAAATATTTTTAAACTGTTAAATATAATA
ATTATCATACACAGCATAATTAGATAAAACAAAAATTTACAGAAATAATATTTTTAAAAC
ATTATGAGTAATATAATGAAAATGTTTACCAAGTTGTGATATTTAAAGAAATATAATAAA
CAGAATTTATTGTTAAATCAACTAATTTTCTTTTACAACAATGATGTTACTCTGTCTCCT
GTAGAAACTTACGTCTTTCTTCCTTTCCTCTAATAATAGCACTTTTAAATAACTTACAGT
AGAGCTCTATGGCTGTTGGGGAATCATCATTGCCAGGTACAGGGTATGATACCAAATTAG
GATTACAATTTGAGTCGACAATTCCAATTGTTGGTATTAACATTTTTGCACTATCTCTGA
CAGCTGTGTGCTGATTCAAAATATTATTCTGGGTGTTAAGAAATATACATAAGTCAGGTA
ATCTTGTTATAGCACCAAACTGCTGATTGGCATTTGTGAAGATACCACCTCTCCAGAATC
TTGTATGAGCATATTCTCCACATTCCATTGCTGTTTTTTCCACGATATGTGCATTTAGTG
AATTCCTATTAAAAAAACAAATGATTCCACCTCTGTATGCAATGTGGGCTGTGAAATTAA
GAGCTTTACGTAAATGTTCAGCTGTTGTATCCAAATCAAAAATGAGGTGTCCAAGTCTTG
AACCATATATGTATGATCTCATGTTATCATTAAGGGACCCTATTTTATGACCATAATGCA
CTCTTGCATCAAATAGGTCTTTTACTGTAAATAAATTATGTACACCAAAATAATCTGGGT
AATCAAGAGGATTTTTCTGATTTTGTTGCACATCAATTACATTCTCTGGAATGACTTGTG
GAGAAGTTGATGTGTATCTCAGAAGTGAAAATCCATATTTTGTATATCTACACCCTGTAT
TACTCAAAATCATTACGTTTCTTTTTGTCCTATTTATATAGGAAAAGGAAATCAATAGAT
GGGTTTGTTTTTAAAGTTTTTTTAGGTTATATTCATAATACATTTAGGTAAATTTTTTTA
AAGATTATATGGTCTGGTAGCGAGACTTTTAAGCCAGGATTTGAATCG
(2508 bp)

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