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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp67846_c0_seq3
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_nucleoporin_NUP188_homolog_[Amyelois_transitella]
Ontology
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0006405 P RNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0015031 P protein transport
GO:0017056 F structural constituent of nuclear pore
GO:0044611 C nuclear pore inner ring
GO:0051028 P mRNA transport
Transcript
Level		FPKM:5.91 TPM:10.30
ORF EntryO_BomoEE14594_complete:A_BomoEE_comp67846_c0_seq3
Sequence
(Nucleotide)
TCTTTGTTTAACAGACGAAGCTCAATTGTTTTAAAAATATGAATGACTTATGTACTCTTT
GCCTCTGAAATCGATAAAAAATATATACTTTGACAACAATAGTTGCACTTGACATTAGCA
TCATAGCCTCGCATAACCTGAAAATGAAGAGGCGGTAAATATTTATACGAAACTGTTTTC
TATAATTTCCACTTTTAAAATTTTATTCTGTACCTAATATATGTCAAACCGGCTGGTCGT
ACTAGTTCTGTACTGCAATCAAGTTAAGTATGACAACGAGTAGTGTAAATTATTGGAAGA
GGCTATGGCGCTGGACAACTTCGGAGAGTCTGACTACAGAAGAATTGACCAAAATTTTTG
ATACAAAAGAAGTAAGAGATGGACTTAAAATTGGATTGGCTAGTTACAAACAAAACAAGC
CTGAGGACTTTACCAAACTTCAGTCACAGTATCCGGATCAAACAAAGCTGCTCACTATAG
TGCAGACACTTCAAAATTATATTGATGTCGACTGTTTTCAATTATGGGAAATATTAAAAA
ACTATTTGTGTGATATATCGTATGGTACACCTGAGAGTGCATTAAAGAATGTTGCATTTG
TTGACACCCGACCTACATATTTGTCTCCCAAAGTATGGAGCTTCTATTATTCTGAGCGAC
TCTTTCTACTCAAATTGCTTCAGTACATCATTCAGCTTAAAGATGATGCTCAATATAAAT
ATCAAAAGGAATTCACCAAGATTATTGAAGATATTGGCATACAAAACATTAAAACCTCAC
TCATATCTCAATTTGAAAAGGTCTTAAGTGCTGCTCCACCATCTAGAAAAATATTGAGTG
ATTTTTCTAATGATTCTGTGCGACACACTTGGTTAGAGAGTAATTTGAGAGAACAATTAG
CAATACTTCAAATACTCTTAATAATTGCGGAAAAGAACACATTTCAAGCTGAAGAATTCA
AAAAATTGTTTAATTTGTTCATAAAACACAGTTTTGGGAAGAATTATGGGTTCAGTGAGT
TCCTGGGAGAAAGACACAGAGAGCAATGCCTCTGTATTATGTACATGGAAGTTTGCCTGT
TTATGATCATTATTGATCATTTGAAAATTGATAATTTATCAACATGGATAGAAAATACTA
AAGAAGTTGTAGAAACTGAATTGACAAAAATTCAAATGTGTACAGAACACAGTGCCATGC
TTTTGACGTGGATGCTGGTAACGTTGCAGAGTGATCAACATGTAAAATTATTTGAAAGCC
AATATCAACATTTTGGCAGTACTGCAATGAAGATGAAAGTGTTTGAGTTTCTTCAACAGA
TGCTGAACAGTCCTGTATTCTCAGATCAATCAAAGTGCTCACAAATAGCTAAACAAAGAA
TGTTTAATATCCTCAACGAGCTTTGTGACAAGTTTGATGGAGACGGAAGCCTCAGCAATC
AAACTGGCATTATACAGCTGTGTTCAGACCTGCTTCAGTCACCAGAAATAGCTTGTCAAT
TCTGGAAACTTCATCAGAGAGACAAAGACTTTGGTGTAGTGTCATTATGGAATACTGCAC
TAGAATATTTCCCTCATCATTTTAGTCCTCTCTCAAATTTAGCTGCTGGCTTAGTTCAAG
CTGGTAAGAACAGCGTCAGAAATCTAATATCTGAATTGAAAAATTTACCTGTATACACGG
AAATATACAATCCAAACGCAGTACCACTGGTATCTATACAATACGATGACGCCATAGTCG
GCAGAGAGTACTACCCTCTGGGAGATCCGTCTTATCGCATTGAAACTGGCTCCAAAGCCA
CAATCATGGAAAGAAAGGAAGGCACCATGATCCACTTCAGAACACCTTACTCTTATTGGA
CGGTGTTCAACAGCGATATAGAAAAAGCTTTAGACAGAAAACATCATCAGTACAACGTCA
ATGCGATATTGCAGAGAGTTTTTGAAGGTGCGAGAGTATTAAAGGGTGTACTCAAGTCGC
TGGTTGAGGAGAAAGAGATCCCAAAGGCGTTGGTAGAATCATGTGAAGGAGTTTTCGATA
TACTAGTAAGGTTTATGAGGGCTGATTCTCCGCCTCTGCTGCTTTTGGTGGAATGCCTTG
AAGTATGTTCTGCGTTGGTGCCAGTTTTCCCGAAAGAAATTCATTTGAGATTGATAAACG
CAGGTCTGTTACCACGCATCATGAATCAGAAATTGACGCATATAGAGTATGCCAATGGCG
AATCGTTTGATTCAGCTACCGTTGGATCCTATTTAGTTGCACTAGAACAACCTACAGGAA
CATACAAGTTCCTATCTGCGTATATTGATATGCTTTGCACCTTTCATGAGGCATCAACCG
AAGAACGTGTTACCAAAGAAATAATTCTGCCCGGATTGATCCTGCTCCTGCGCGAAGTGT
TGCCGAACGCATACGGCTGGCGCTACACGAACATACAGGACCGGCGCGCCATGTTGCAGC
GCTGTATGCGCTTCCTGACCTTAGTGTTGCAAGACCAGAAAACAGATGGCAGCACCGCGC
TGTTGAAACGGACCTGTGTATATAGTTTACTGCACACTGAAAACGCTTTGGTGCTGCTCA
AGATTATTTCACTGGGAAATGAACATTTAGAGAACATGATACAAAATGAAACGAACTGGT
CATCCGGTACGGGTTCACAGTTTATATCGATAATACAGAGGTGCGTGGCGGTGCTCATGT
TCGCTTTGCGTCTCAAGAGTCTCGTCACGGGATCCAACGAGATGACGCCGTTGGAACATC
TCATATTCACTCAGAATAAGCAGAAGGATTCATTGAAAGTTGTACCCAAAGTGACAAGTT
ATATCAATCACGTGTTCAACAAAAGCTTGGCCGTGTTGTGCTGTAGGCTCTTGAAGATGT
TTGCCGATAGTTTCCAGATGTCCTTGTTCGCGTCGTTGGACATGACCGCGTACCAAGTGC
GGGTGTTGTTCCTCGATCGACTTCGCGACGAGTACGAAACGACAGAACTAAAAGTGGCCA
TACTAGAGTTCGTGGCCACGTGCGTGGGCACGCAGCCCGGCCTCACTGAAGCGTTCTTCA
TGATGAACTACGAAAAAACGAATGACGATAAAAAACTCAAGGAAACCGATAAAGATAAGG
AGGAAAACCTGTACAACTACGAAAGCATCCTCGGTTATATGGCGGAGTACTTGGGAACTG
TGAAGGCTGATGCGAAACAACTTCAAAGTCCGCTCTTAGGGTGCATAATGGGTCTGTTCC
ATGCTCTATGGAAGAACAATATGCAGATTCTTGTGAAAAAATTACGCGAAACCGCAACAT
TTTGGGATTACATGACCAGTCCACTCTTCAGTGAGATACAGCCCGGCTTGAGAACTTATT
CGCAAATATTCAACGTTATCGGCATAGAACTATTCGTCTCTCGGGGGAAAATAGAAAACG
CTTTGAAACTGATGCTCGAGCAATTGTTTGATACCAACAAAACCCATTTGGACAAATGGA
TCAACCATATATTTGCGTTTAAAGGTAGAAGCGAAAATGAGCCCGTCGATAAAGTGCCGG
TCTGGCTTGGATTGTTAACCTCTTGGAAAGATTTCACCACGATCTTTTGCAAAACCTTAC
CGATAAGTTTGAATATAGCGCACAAAGCGAAAATGGTCACCCCCTGCATGACCGCCTTGT
TGAACGAACTCGAAGATCTGAAAGACGGAAGACTGGTCGTTATGTTGGCCGAACTGTACG
TCATAATGTTGGCCAATTGGAGCCACGATTGCTTTGAAAACAGAAAAGCCAGTGCCAAAC
AAATCGATCGTTTATTAACCAACACTGCGATTATATACGAATGCCTCCACCCGAGGGCCA
AAAAAGCCATCCTCTCCATCTGCACAGTCGCGATCAGCGGTCTCGATTATGAAATAAAGG
CTAACAGTGCCACCGCGCAAAGCATTATTAGATCCGTGACCAATTTAAATAGCGTTGAGT
TGGAGAAATTGTTTGACGATTTCAAGGATCTTCCTAAATCGGACACGAAGACCACCGAGC
CCTCGACGTACGAGGACGTATCGCCGGTCGTTCTATCATTGGCGATGTTGGAACAGTGTC
TGGAGTTGTACGACGACATGTTCTCGGGACTATCGCAGTGGTTCCAGTCGAGTCGATTCA
TAAACAAGCTCCTGTGCTGTTTGCAGATGTGTTTACAGAGCCGTCGCCATTACCAGACGT
CCCTGGCGGCGTTACGGTGCCTAACTGTGTACTCCCGGGGACCTTTCTCTAAGGAGCTCT
TGCTGAGCGATATCGACCAGTTTTTATGGATGCAACTGTTGCCGCCAAAATTCGACGGCG
TAACTTGGAAGCCCGAGGAGTGGTGGAAAGTGTACTCGTACAGCTTAGACTTTATATCCA
TGATGGTCATGAAACACGGTCAGTTCTTTGCGAGTGACGCGATCACATTTGTCGGGGTCC
ACTTGGAACATTTGATAGAGGCCATAAACCTGCCACGACAGGTCGTCAGCATCGATTCGT
TAAATGTATGCGCGTCCGCTTTGAATCTTATAGTTCAATTAGTGAAATACGAATCTAGAT
GGCGCTTACAGAACATGCATTCGCTTTTTGGTATTATGAGAAGTATAAGCGCGTGCCTGT
ACCAATGCGTGATCTACATGATCCGATCGCGACGTACCTCCGACGCCGCGCAGCCTCCGA
GCGACGACACTCCGCCGACGCCGTCCTTATTGCCAAGGACCTTAGAAGTTCTCCACATGT
CTACACTGTGCTTGCTATCGTTCAGTCCCAATCTGCTGTCACTACTCGCTGACCCCGGAC
TAGACTTGGAGAGATGGCAGCCATTAGTCGAACTACATTTCGGAGCGCCCAAGCTGTCGT
ATGAACCATTCCCTCAACTAACTTTCGGTACATTAGTATCCGCCATCTGCTTGTTGACGA
GATCATTGAATCATGCGTACCACGCGGAGGAGAGCAGCGGGTCGCGGTCCCCGCGCGGCG
GGCGGCGGCGCGTGTGCTCGTGCAGCAGCCCCGCGGAGTCCAAGCGGCTCAACCGCAGCG
AGTCCCTCACCAGCGTGTCCTCCGCCGCCAGCGCGCTGCCCGGCCTGGACGAGAGGCTGG
TCGGCGGCGCGCTCGAAGCCACCACTACGCTGCTCGCAGAACAGGCGCTACTTGCAGTGC
GCGATCCGAACGTCCCCGCTCGTCACAAGCAACTCGTCCGCCGGGAGCTCTGCTCTGAAC
TAGCTCAGTTTCATGATTTCGTCCGCAAGAGAATATTGTGCGCGGCCCATGCGCGCCCGC
ACCTCGTGCGCAACAAGCTTGGAGCTTGGCCGCTCCCTTCAGACGAAGAGGAAGTCAAAA
GGATCGAAGAAGCCAGGAAAGAGGTTAACTCCGCCGCCGACGATGAAGACCAGCGCTCGT
TGCCTCCGCCCCCGCCACCGAAACGAGCATCACACGATTCTATGCGCGAATACATTTTAC
GTAAACATTACTTAGAAAAATGTGCACAAACACCCACAAAAGGACCGCCGTCGCCCGTCT
CACATTCGACGCCCGCGTCCGATAAAAAGAAAGAAACATCCAGAAGCTCGAAACGGGTTT
CTTGGGCGGAAACTACCAGGGACAGCGATGAAAGCTTAGACAGCTCTCTCCAAGAAATAG
AACCAGTATATTCTAATCTCACTGATGTACAAATTAACAATGAAGAAGATTATTTTCATT
TCATGTCTGTTGTGTTTCTTTACATTTGTCAAACAGAATTGTGATTTAACTTCGAATCAA
CTTGCATTAAATCAAATTGCTTTTCAAAAAAAAAA
(5795 bp)

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