SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp67794_c0_seq1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_protein_scarlet-like_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0005395 F obsolete eye pigment precursor transporter activity
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006726 P eye pigment biosynthetic process
GO:0006727 P ommochrome biosynthetic process
GO:0006810 P transport
GO:0006856 P eye pigment precursor transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0031409 F pigment binding
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
Transcript
Level		FPKM:5.55 TPM:9.68
ORF EntryO_BomoEE14470_complete:A_BomoEE_comp67794_c0_seq1
Sequence
(Nucleotide)
GCTATCTAAACATCTTCGTAGGCTTATCCCAATGAAATAGTTGAAAGTAACAAAAAACCA
ACACCCTGTAGTTCGGAATGTCTGACACTAATTTGTTTGAGATGCCCGTGTGTGTGTGAG
ACGCGACAGTCAGTTGAAGGTTCCCACAAACATCACACGTATATTGTTCAAGCTTAGTGT
AGTGTTTGACGTATTCAATGAAATCCTGCATTTAGTCGGATTTTATTTTGACCGTGTTTT
TATAGAACCCAATGACGTAACATCCTCAACATGAAAGAATACAATCTTAAGCTACCCACG
CGCAATGTCCTCACCGGAGCCGTGGTCAACTGGGAGGACGACGAAATGGGAGTGATGGGA
GATAGCCCGGAGAATCTGACATTAGCTTGGAAGGACTTATCTGTGTTTAGAAAGAAGAAG
ATACACACTAGCATGTGGAGATCGGCGGTCTATGAAGAGGTTAAAGTGTTGCATGGAGTA
AGCGGCAGTGTCTCGTCCGGAAATCTGGTGGCGTTAATGGGTTCAAGCGGGGCCGGAAAA
ACCACACTCTTGGCCGCCATCAGCCGTCGTGACAAGAGCGCTCTGACAGGCTACCTCATG
CTAAATGGAAGATTAGCCGGCGCTGACCTGATCGCCAGGATCTCAGGCTTCGTGCCTCAG
GAGGACTTGGCAATCGAAGATCTCACCGTAGCTGAGCATATGGAGTTCATGGCGCGTCTC
ATGATGGACAAACGGTCAACCAAAATAATGAGAGCCAAAAGAGTCGAACAGTTGCTTGGC
GAACTTGGTGTTATGAGCTGCACGAAGACTAAGCTGAAGGCGTTGTCTGGAGGCGAAAGG
AAGAGGGTCGCTTTGGCTGTACAGCTTCTAAACGACCCGCCCATTCTCTTCTGCGATGAG
CCAACAACGGGGCTGGACAGTTGGGCTGCGAGCGCCGTGGTGTCCAGGTTAAGGAAGCTG
GCGATCGGTGGCAAACTAGTCATATGCTCAGTCCACCAGCCGGCGTCAGGAGTGTTCGAG
ATGTTCCACCAGATTGTGTTTTTGGCGAACGGCCGAACCGCCTTCCATGGAACCATTGCA
CAAGCGGACCAGTTCTTTGGATCGTTAAACTACAAGTGTCCGCTTGGTTTCAACGCTGCC
GAATACTATGTATCCCTACTAGGAATCCAGATCGGTAAAGAGTCAGAGAGCCGAGAGAGA
ATTAGGCGGATCTGCGACGAATATCACCGGTCGGACATCGCTGCCGAGATTGAGGCTAGA
GTTGGAGAAGTACATGATGAAGTCGATTACTTTAATGGAACTCTTGATGAGAAGAACGAA
TATTTCGAGAAATATCTCACCCTAGTCAAAGTTAACTATTTCGTCCAATTCTATTGGTTG
ATGTGGAGAAACATTCAGCAGATGAAACACAATAGTACAATATGGATCGCAGAATTTTTA
TTGCTCATGTTTGTCGGCTTCATAATTTCCTTCCCCTACATCGGACACTTCAAAGAGCTT
GACCAACGTGACATTCAGAACGTGGAAGGTTTGCTGTACCTAACCATCACAGAGACGATA
TTCTTGTTCATCTACGCCGTTTTCATCACTTTCCCCAGTGAGGTTCCCATACTACTGAGA
GAGACTGCCAGTGGATTGTATTCACCGCTGCCATACTACTTATCGAAGATGATATTTTGG
ATACCTCGCGCTGTTATTGAGCCCGTTCTGTTCGGTTCCCTCATATTTATTGTGGCGGAG
CTTCGTGGCGGTTTCGTCGGCTGGCTAGGATTCTGTTTCGTCTGTGTTCTTTGTGCTAAC
TACGCCAATGCATACGGTTCATTCCTATCAGCCACCTTCGACAGCCTGGAAACTGCCGCT
TTAATATCTGTGCCTCATGAGCTCATAGGCATTATGTTTTCCGGCATCTATCTCAACCTG
GGAAGCGCTTCCCCTTACTTCTCCTGGCTCAGATACATATCCGGATTTTACTATGGAACC
GAATCAATCTCTATACTACAGTGGAATACTATTTCTACGATCAATTGCGTCAATATCCCG
GGAATGCCATGCATAAGAACCGGCCCCGAAGTCTTATCTCGGTTCGGATACGACGAAAGC
CATTTCTGGAGGAACTGCGCATGCTTGATTTCTTTATACTGTCTAGGGAATTTGGTGGCT
TTTTTTATGGTGGTCCGAAGGAGTAAAGGAACGCCTGTTTATTAAAGGATGCTAATGATA
AGCTTTATACGAATGTATTGATTTATAATATAATCTTAATAAATTTGTGATTAAATCAAA
AAAAAAAAAAA
(2291 bp)

- SilkBase 1999-2023 -