SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp67792_c0_seq2
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		Exportin-5_[Papilio_xuthus]
Ontology
GO:0000049 F tRNA binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008536 F small GTPase binding
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0031047 P gene silencing by RNA
GO:0035281 P pre-miRNA export from nucleus
GO:0042565 C RNA nuclear export complex
GO:0044822 F RNA binding
GO:0070883 F pre-miRNA binding
GO:0090631 F nucleocytoplasmic carrier activity
GO:1900370 P positive regulation of RNA interference
Transcript
Level		FPKM:8.05 TPM:14.04
ORF EntryO_BomoEE14465_5prime_partial:A_BomoEE_comp67792_c0_seq2
Sequence
(Nucleotide)
ACAACTACACTCCTCGCGTTCCCACTAAAAAGTCCAAATTCTTTTACAAACGCAACACAG
TCACAGATTAATTAAAGTGATTTCAATAAAAAACGATAATGACACTGACAAATGACAGTC
AGAGAGCAAAGTAATTCAAATAATTTCTCTTTTGCAACATTCCTTCATAATCATTCGCAC
GAGGTCCTTTAAATGTTTTGAATTTGGTTTTGAATTATTTTCATTGTTTTACAAAAGTAC
TCGTGTCAAAAAGGTGTGTTGCATATAAAAAAGAAAGCACGTTACATTAAAGTAGAGAAA
AGTGAAAAGTGTATGTTGCATTTAAATCTGATACAACTGGTTTTTAATTTACATGCTTCC
GAGTGTGTACCGGGTGGCTTAAGATGTCATGTTTTATTAAAAATTAGCAAATTAATATAA
AATAAATGATGGGATTGATTGTTTGCAGATCGTTAATATTATAAAATGAATTGATTTTAT
ATTGTATGAATATTTCTTGATAACTGTGCGACATAGGCAGAATGAATGTAGGAGGATTGG
GACCAGAGATTTCTGGGGAAGTAGCTTTAATAGCTGATGAGCTAAGTCGAGCTGTGGAAT
TGACCTTGAACCCAACTGTTTCACAAGATGCTCGGAATCAGGCATACAATGCTTGTGAGA
GTTTCAAGGAGAATTCACCATGGTGTGCTCAAGCTGGTCTTTTGTTGGCCAGTGGCAATC
AGTATTCTCCTGTTGTCAAACACTGTGGTCTTCAGTTGATGGAGCACACTGTCAAGTACA
GATGGACACGTATAACACAGGCAGAGAAGCTTTTCATCAAAGAGAATGCAATGAAACTTC
TCTACATGGGTGGCTGGGAGATGGGCCATTTGAATGATGCACTGGCTCGAGTAATTGTTG
AGATGATAAAACGTGAGTGGCCACAGCAATGGCCAACTCTTTTAGGCGAGCTCAGTGATG
CTTGTACTAGAGGCCATCAACACACACAGATTGTGTTGCATGTTTTTCTGAGACTGGTCG
AAGATGTAGCTACTTTACAGACACTGGAACAGAACCAACGTCGTAAGGATATATACCAAG
CTCTAACGAGTAACATGGCGGAGATATTCTCGTTCTTTATGCGCCTCATCGAGCTTCATG
TACAAGAATTCAGAGAGAAAACTGCGACCGGCGATTATAGCGGTGCGGCCAGCAATGGAC
GTGTTGTACAGGTAGTCTTATTAACGTTGACCGGATTTGTGGAGTGGGTGTCCACAAATC
ACGTTGTCATGAACAACGGAAGGCTCCTGCAGATCCTCTGCATCCTGCTCCAAGACGACG
TATTCCAGCTGCCCGCGGCTGAGTGCCTGCTACAGATCGTTAATAGGAAAGGATCAACCA
AGGAGCGGAAACCTCTGATGATCTTGTTCAGTGAAGACGCGATTTCGTGTATTCACCGAG
CAGCGATAGCGGCGATTAACGTGGTCGACGAAAATCATTATTTGTTTCTAAAAAAATTAG
CTCAGGTGGTGGTGGGCGTGGCGCAGCAGCTGACGTCGCTGTGGAGCAACGCGCAGAACG
TGGAGTCGTGGCTGCCGCTGCTGGTGGAGACGAGCCTGGCGCTGGTGTCGCACCCCTCGC
TCACGCTGTCGCAGAGCGCCACCGCGCTGTGGCTGGCGCTGCTCAAGCACGAGCACGCCG
CCAAGCACCTGCTGCCCGCCGTGCCGCGCTGGCTGCACGCCGCCGCGCCCAAACTGCTCA
AGGTCCACTACCCGACGTCCCGACCGAACGGTACAAACGACGCAGTCGCGTACGCGTGCA
TAGACTACGATAGCGAACAAGAATTTAATACTTTTTTTAATAAATTGCGAACTGAAATAT
TAGATAGTTTTAGGTTTTGTATGATGGCGGCCCCACTAGTGACGTGGTCGTACGTGGAGC
AGTGGACGCAGTCGGCGCTGGACAAGCTGGAGTCGTGTCCGCGCGCGCTCCACACGCAGC
ACCCGCTCTACGTCGAGTGGGAGGCGCTCACGCAGGCGCTGGACGTGGTGCTGTCGCGGC
TGGTGGAGACGGAGCCCCGGCCCAGCGCCGCGGCCGGCCTGGCGCTGCTGCAGCGCTGCG
TGCTCACACAGCCCTCCGACCCGCTCTTGCTGTCACTGTTATTGTCACTCATCTCCGCGC
TCTTCGTGTTCCTCAGCTGCGCCTACAGCCAGCTAGCAGGTCCCGGGGTAGGGGCGGCGG
GGGCAGAGCTGCTGCCGCGCGTGTTGGACAAGATATTCTCGTCGCTGGTGTACGAGGGCG
CCGCCCCGGACCAGCGCCGCTCCCGCGCCGTCAAGAACGTGCGCCGCCACGCCGCCGGCC
TGCTCGTCAAACTCGGCTCCAAGTACCCGCTGTTACTGCTGCCGGTGTTCGGTCGCCTGC
ACGAGCTGTCCCGCGCGGCGCTGGCGCGGCCCGACCTCAGCGTAGTGGAGAGCGTGACGC
TGCAGGAGGCGCTGCTGCTAGTCTCCAATCACTTCTGTTGCTACGAGAGGCAGAGCGCAC
TCGTCGCGCAGGTGGTCGGCGAATGCGGTCCGCGCTGGGCAGCGCTGAGCTCGCAGGCGG
GCTCCGCGACGGCTCTGGTGCGCCTCATAGGGCTCGACGCGGCGCCCGTGGACAGCTCGC
CGAGCGACACGGACGGGCCCGGCTCGGCGCGGCGCGACCTGCTGCACGGCCTCACGCTGC
TGCTGGGCGTCGTGAAGCGCACGCACGTGCCCGCCGACCCCGACAAGGCCACGCGCGGCG
GGTTCAGCGCCGGCCTCACCGCCGCAGATCGGGAGAGCGTCGGGTAGG
(2808 bp)

- SilkBase 1999-2023 -