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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp67787_c0_seq6
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		PREDICTED:_nephrin-like_[Amyelois_transitella]
Ontology
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007267 P cell-cell signaling
GO:0007399 P nervous system development
GO:0007416 P synapse assembly
GO:0008039 P synaptic target recognition
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030054 C cell junction
GO:0035418 P protein localization to synapse
GO:0042803 F protein homodimerization activity
GO:0045202 C synapse
GO:0048668 P collateral sprouting
GO:0050808 P synapse organization
GO:0050839 F cell adhesion molecule binding
Transcript
Level		FPKM:0.39 TPM:0.67
ORF EntryO_BomoEE14441_5prime_partial:A_BomoEE_comp67787_c0_seq6
Sequence
(Nucleotide)
GCGTTTTATAAAATAAAAAAAACTCAAATTTACGATCACGACACCACAGTAAGTACATTC
ATGAACACTCGTTTCATATAATTTAAACTCAGTTCAATTGTTCTCATTAAATCACTAGCA
CACTTAAAACTCATTTGCATTGTTTTGCGCATTGTCAATTTTTCACTTAATAACACAATA
ACACTATTTAATAATCTCGTTTTCATTGTGCACTAAACGCATAGTGTCAACTCATTTTCA
TTTTGCACTAAGCGCATAGTGTCAACTCATTTTCATTTTGCACTAAACGTATGTGTCAAC
TCGTTTATATTGTTCACTTCCGTCAAGTCTTATATTCACTATATTGCCAAATTAGTTTTT
CTTCGCTTCAGTCTTTCGTTGTTAATTTTAAATGCTCTAAATTTGTTTCTGGTGATTTTG
TTGAGCTAGTCTTGTTATCACACGGCGTCTGTACCGGAGAATTTACATTTATCCTACTTT
TCAAATGTGGTAACGTATTGGTTCGGTCCACGCCTTTGCTATAATAAACGGTGTTGTCCG
TGTTAAATCTAACCGGGGGCGAGTTGGAACAGCTCCTGGAGTCCTGGGTCATCAGGGACC
TTGGCTCCAAGTGGTATCTCGGCTCCAAATTCGGCATCTGCGTCAGATTGAGGGGATTCC
TGCTGCTGTTACTGTATATCGTTGGAGGGGGGGTCGCGTATAGTTCGGGAGGCATTAGCT
GTTCAGCTGGTAACAGGCCAGTAGTATTCAGCGGCAAAGCATTCTTATATTTCAACCAAT
CTTCGTAAACCTTATCGTACTGTCTATGACAATCGTTTGGTCCAACATTCGATAAATGTA
GACTGCTCATCGGCCCCAGACTCTGTATGCTTGGCCCCAAATTCGGCATTGGAGCCAAAG
TTGGTGCATACGTGGGCCGTCTATAATCGATTGGGCGAACTTGTATGTACTGGTTGCATT
GGTCCAGATTGTGGTCGTAGAATCTGTCGCAGTTCGTTTGAAGATCGTATTTGTCTGGCG
TTTTCGAAATGAGAGGCCTTATAGAGCTGTAGTCAGTGGTGGAGGATTTATTTGAACAGC
TGTCACTAATTTTTCCATCCAGTGGTATTATATCTGGATTTTTGTCTATACTATCAACGC
TTTCAGATTCCTTGGTGCTGGTTAGTGGTATATTCAAGGTCTCGTCCTGTTGCCGCTTGT
CTTTCTCACTTTTACCTTCCTTCTTCTGACAGTATCGGCAGCAGAACACCGCGGCTGACA
AAGCCGTCATCGCAGCGATCAGACCTACCGCCGCTAATACTATTATCAATACTGTGGTAA
GTTCAACTTTAACTGGTACTTGTGCCGTATGTCTTTGTGGGTACTTCAGTAAGTTCGAAC
TCAACGACAATGGCTCGCTAGATCCTTTTCGATTAAACGCTTTTATGGCAACTCCTAAAG
CGTTGCCGGCTGGCAACCCCGACACTTCGAATTCTGGTTCTTCCCCCGTCATATTGCGGA
GCAGTAAGCCGGTTGCCATGTCGAATATTTGTAACAGAAAGTATTGTCGAAGGCCGCCGT
CGTGTCCCGGCGTGCAGTTCAGTGTCAAAGAGTCGTATGTTACATTCGTGATTTCGCATG
CTTTAGGTGCCGATGGTTTGTCAGCTGGAAGTATGTGGAATAGACATGGCTTCGCCTGTC
CTCCCACCATGTTAGATCCTGAGCATTGAACCCAGCCGTAGTCCGAAGACGTGTTCACCA
TGTAGAGATACGTTCCAGGCAGGTTCTGAGCTGTCGTCATGGCTGTGGTGGAGAGCTCGT
GTTTGCTGTGAGCAGAACTGTTGAACCACCAGTGGTACCTTATGGAATCCTGGGGATTGG
CGTCTAAGTCGCATTCAATTTCTACCACCTCGCCCCTAGCGGCTCTTAGCACTAAAGGCT
GGTTTGATCTACACGTTGGGGAAAACTTGACGTCCAATGTTAGGGGTTCACTGGACCCGT
CGCCGAGGCTGTTCCTGGCCGAGCAAACGTAAGAACCAGCCGCTTTTCTGGATACCTTCT
GCAGCACCAGACTCTGATTGGCCAGGAGGACGCCTGGCCCGGATTTTACTATCACACCGT
TATGTGTGAAATAGACGTGGTTGTGCCAGGGGTTCGCTCGCACTCTACAATCCAGATATA
TATCGGAGCCTTCCACTACTTTACTGGCGTCCAAGTTGGCACCCAATTCTAGCTTCACAA
CAGGAAGATGCTGTATCTCCATTTTCCAACCATCTTCATGAGTCGAATGGGGTAAAGTGG
GCTGGATCGCTCTGCAGGACAGAACCCTACCGGCATCTTCTATCGAGGGCACGAAGGTCA
AGACACTGCTGGTCACGTTGCCATCAGTTGAAGTCGTTTCTCGTACAGTCTTCAGTCTTG
TTCCGCCCCTCCACCATGATATTGTGGGCTTCGGTCTGGCTCCAACGGCTTGGCATACCA
GTTCTGTGCTCTGACCTGCGACTAAAGGCCTTTTTCCACCCTGCAGACGAACCCACAGCG
GGCGCAGATTCACGTCTATTGATATATTCTCCGAGACGGGTGATATTAGGGGATCAGTTA
CTGCCTGACACATGACGTCGGTGCCGTAGTCCGACCTTTGAACCCTGAAGGAGACAGTAG
CTCTCGCTTCGGAGTTCGCGAGGAGTGCGTGCGCTTTCCACCACGAGACTCGTGCAATCG
GTCGACCTGTGTCGAAAAAATGATGAAGTTTATT
(2734 bp)

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