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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp67730_c0_seq4
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		DNA-directed_RNA_polymerase_III_subunit_RPC6_[Operophtera_brumata]
Ontology
GO:0001056 F RNA polymerase III activity
GO:0002376 P immune system process
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005666 C RNA polymerase III complex
GO:0006359 P regulation of transcription by RNA polymerase III
GO:0006383 P transcription by RNA polymerase III
GO:0032728 P positive regulation of interferon-beta production
GO:0032774 P RNA biosynthetic process
GO:0045087 P innate immune response
GO:0045089 P positive regulation of innate immune response
GO:0051607 P defense response to virus
Transcript
Level		FPKM:5.00 TPM:8.72
ORF EntryO_BomoEE14332_complete:A_BomoEE_comp67730_c0_seq4
Sequence
(Nucleotide)
ACGGGCTCAACCTGAGAGAGTTTACTAACATTGGGCCTAAAAAGAGTAGTGTTTTGCAGA
ATCTGGATCGTTTTACGACCCCGAAATTGCCAATTTATTATGGCAATTTTGCGAAGCTTA
GGTACGTAAAACCCAATCAGAATAGGATTTACATAAAATCTGTTCCTACTGAGCGTCTGT
GTCGCAAAAATATGTATGTCAAATTTAAAATCATCGGCCTGGTAATTTCGAACTTGTAAA
GGGTGAGTGGAAATCAGCTTTTTGTATATAAATAATAGATTGAAACTAATAGATAAAATA
TAATAATAAATATTGGGGCCAGCCTAAAATGTGTTACTCTTGGGGATAAGTGAACAAGGA
TGTATTGTTTAATGCCGAAGAAAAACTGTCAATAAGTTAACTGTCAAATTTATCAAATGT
CCAAAACTTTACGACGATTTTACGAACCCTGGGAATAAATAATTGAGATTCTGTAAACCA
TTGTGAAGGACTAAACCGAATTTTTGGATTTATTGTATTTATTTTGAATAACCCATACAA
TATGGTTGTAGGGGCGTTTCCAATAGCTAAATTATCTGTTTTGTTGGTGAAACAGATAAG
TAAACCAATCGCGAACGTGTGCAAGGAGAGAGCCAAGAATAATCCATTTTTCAGAACTTA
TGTTTGTATGCCTCCAGCGCAATTTTACAATTGGTGTGAAGTTAAAGCCAAAATGTGGAT
TTTAAATTTGGGAAAACCTGTCAATATTCCTGTTTTAAGCCAGGAAATGGCCATTGAACT
TGGAGCAAATCTTCTTGGCGAAACGGTTATATTCGTAATTGGTGCTAGCCTTTTAGTGAT
CGAGTACAATAGGTATGTTTTCACAGTATAAAAGGTAAATTTAAAAGATGTCTCGAAATT
GTATTTTGACTATTTTTAGGCAAAGTAAAAAAGAAGCAGCCAAAGAAGCCAAGCGTGAAG
AGGAGATGAAACACATCACAAGTACTATCACAGATTTGTATTTTACTGTGCAAAAACAAC
AGACACAACTCCGAGAAATGGAAAGGCTTATTCATTCTATTGGTGGAGATCAAGCACCCA
AAAACAGCCCATCCTCTGACAAAGATAGTACAAATGGGAGATCACCACCAGATGCCACAC
TAAATAATCACGTTCCTGAACATATAAATCACAATTCACCAACTCTTAGTCCCACACCTT
ATCCAAATAAAGGCCTAATATTGCAGTCGTTGAATTATATACAAATGGACGCATTTAGCT
CATTTTTCCCCAAAAATAATACTGAATATGAGAAAGAAAGAGATGAAGATAAATTTACAA
GAAATAGGAGGGAGCCAGCTGTACTCTCTGGTATTTTGCATAATATCGAGAATAATTTTA
GAAGTTTATTTTGAGGATTTTACAGTATAAATTACACATTGTACTTGCATTAAAATGTTG
AAATGACCACTAGAATGTTAAATAATTTGTTGCAAAATTGTTGTTGACCATAACTAATTT
GCAATAAATTGCTTTAAAACAGGAGCCTTCTGTGTGACAAGTTATAAAGTAGACTTTTCT
CAGTTAAAAGTTACGTAATTTTAACTATATAAAATTATCTACAGTTATAAAAGTATTGGT
TTTTCAAATGTGCACACAATATTCATATTGTAACTAAGTATTCTATTGTTAAGTAATGTT
CTACAAATATCTGTTTTAAAAGCAAAAATTTTGAACTTATAATAGAATTAAAATAGTATG
TGTTTTCAACAGAAATATATTATTTAATGCTTTTAAGTATAATGTCTCTAGTCACAATTT
AATTTGTAGAGGAAGCTTATATTCTTTTAACTAGATCAATGATACTTATTTAAATAGGTA
TTAAAAATGTTATTAATTATATTTTTTTTTTAATTATTCCAACCATTCAGTCATATAATT
ACAAACTTGTGGAGTAATTAGTCCTGAGGAATTACATCTTTGAATCAAGGGGCATATTCC
ACATGGCACTTGAACAAGGCCTGAAGATGGTATAAGAGTTTCTATAGCTCTATATACATT
ACTTCCATCGGGAAACACACTTTTTTCTACCTTCCCATCATACACTAGGGTGTTTAAAAT
TGTTGTTACATCATCAACATCTAATACAACTTTACTAATTCCCAGATCAGTAATATATTT
TTGGACTTCAGTAGCAGTAGCATAAGCTTGTGTTCGTCCAAAAACAGGTCCCCTAGGATT
GTTTCTCATATTATCAGCTCTTTGACTCAAGAACCTGTGGCATTGTACATTGAGGACATC
TACAAACTCGGATTCAAAGTCTTGGTCTTGGTACCAAGCTCCCCCTGTCAATGATCTATC
TGGTTCCAAGTTGTAAAGCATATAAACCTTCTTTTTAGAGGCATTAACACATTTCACAGC
TTTTATCACTTTTTTACTTTCCAAATTTTTGAGGACTTTAGTCAGTTGAGTGTTTGCAAG
ATTCGAACGGATCCTAATATCTCTAATCCAAATTCCTTTATTTCCTGCTTCTTCAATCAG
ATTATAGACTACCTTTTCTTCATTATCTGCTCCTTTGATTGCGTGCTTATTTGTTTGAGT
TTTCAACTTATAAATTAAAGATCCGTTTTGATTAAATAAATCAAAACGTTCTTGTTTCAG
CAGATCATTTAAAGCAGTTACTAGTTCTACTGATGATATGCCAGGTATTTCAGCAATTAT
ATCCTTGTCTGTAATTCCTTTCGAGCTTTTTCTTGCAAGATTTAGTATTTTCTCTTTTGT
ATCTTCGGAACTCATTTTTGGAAAATATTAAGCGTTTGTGTATTAGATTTATTAGAATAT
GCTTTGGGGCTTGGGCTAAACCATGGAGTTAATAAGTACCTTAGTTAGAATAGTAACTCT
ATGGGCGACATACAACTGTTTTTTTTGTTTAGGTGATTTTATGACCTGGTAACTA
(2935 bp)

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