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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp67701_c0_seq1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_CCR4-NOT_transcription_complex_subunit_3_isoform_X1_[Bombyx_mori]
Ontology
GO:0000288 P nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
GO:0000932 C P-body
GO:0001829 P trophectodermal cell differentiation
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0007275 P multicellular organism development
GO:0017148 P negative regulation of translation
GO:0030014 C CCR4-NOT complex
GO:0030015 C CCR4-NOT core complex
GO:0031047 P gene silencing by RNA
GO:0033147 P negative regulation of intracellular estrogen receptor signaling pathway
GO:2000036 P regulation of stem cell population maintenance
Transcript
Level		FPKM:10.31 TPM:17.99
ORF EntryO_BomoEE14274_complete:A_BomoEE_comp67701_c0_seq1
Sequence
(Nucleotide)
ATAATTAATTATAGTGTTCGAAACCGAGATGACTTTTTGTTGTCTTTGCGGCTTTGTCTA
TGCCTTGCTCTATTATTTTGCGCCTGCGCTTTTGATGGTCTACGCGACATAACATAAAAT
CATTTTGTGGAAAATTTGAAGTTTGTTGTTATTTGTGACAACTTATAATTCATAATTGTT
TATGAAAGCTTCGTGATAATTACCTTTCCAGGCGTAAGGCTGGATTTTTCAGGTGTGGTT
TGCCTGAATGCAATCGGACTCTATAGTTCGAGCGGTGTACGGTAGCCATCTTGGAATCGA
ACAAAGCTTCAGATGTGTAGTTTGTCTGTTTATCAATAATTTTTGTGCATTTTATTGTAA
ATAGTTTGTATGTTTAGGATATGTACGGAACGTTCGTCCATATGTGTAAATAGCTATGGC
TGCGACAAGGAAATTACAAGGCGAAATAGAACGTTGTTTAAAAAAAGTAACAGAAGGAGT
TGAAACTTTTGAGGACATCTGGCAGAAAGTTCACAATGCGACGAACAGTAATCAAAAGGA
AAAATACGAGGCGGACCTTAAGAAGGAGATCAAGAAACTGCAGAGGCTACGCGATCAGAT
CAAGTCGTGGATTGCCTCTGGGGAGATTAAAGATAAGAGTACACTATTAGAATTTAGGAA
ACTTATTGAAACACAAATGGAGAGGTTTAAAGTTGTGGAAAGGGAAACGAAAACGAAGGC
ATACTCAAAAGAAGGGCTTGGGGCGGCACAGAAACTCGATCCTGCTCAGAAGGAAAGAGA
AGAAATGTCATCATGGCTCATCTCGTCCATAGACGCTCTAAATTTACAGGTTGATCAATT
TGAGTCTGAAGTAGAATCACTATTAGTGGGTAAGAAGAAAAGACTAGACAAAGAGAAACA
GGACAGAATGGAGGAGCTCAAACTGAAACTGGAAAAACACAGGTTTCACATAAAAAAACT
TGAAACGCTACTAAGGATGCTTGATAACATGTCTGTTGAAGTTGAACAGATAAAAGGTAT
AAAGGAAGACGTGGAATATTACATAGACTCATCTCTAGAGCCGGGGTTCGAGGAGAACGA
CTACATATACGACGATATCCAAGGGCTGGACGAGATCGAGCTCAGCGGTGTAGGACCGTC
CACCGATTCCAACAACAGCAATGGCTCCGCTGCAACTCCCAACAGTATACTCTCTGGCAC
AAGTCCTGTAAGAACACCGACGTCAGAAAACCACAATCATTCGACAGATTCAATAGACAT
AGAAAAGAAAAAGAAAGAAGAGATTATACCTAAACCGGTAAAACCACTGCCGCTCCGTGC
GGTGAACGCCAGCGTGGTCGGTAATAGCACGTGTAACGTTAGTTCCTTGCTCAATAACTC
CGCAGCCGCAAGCAATAGTACGGGCGTATCTGGCGCGTCCACGCCGAGCAAGCCCGCGCC
CAGCCCGCCGCCGCGACCCGCTAACAGCACAGAAGTAGTCGAGAATGGTCCAGTATCAAT
CACAGCAGCGGTCAACACGACGACGACGCATCTACCGCCTCCCCCCACGCAGCAACCGCC
CCCAACGTCGCGGAGTACATCGTCGAGTGGCGGCGCCAGCGCGAGCGTGACGACGTCCCC
CCTCACCGTCAACGGCCCCCCTCCCTCCGCGCATCACACGCCGCACCACGCGCTCAACAA
TGGACGAGTGAGCGAGACGTCGAGCATGTCGGCGGTGAGCGCGTCGAGTGCCACGAGCGC
GAGCAGTGCGGCGCACAACACCGCCTCGCTCAAGAGCATGGCGCAGGAGGCCGTGCACCG
CGCCGGTCTGGACCTGCACCACCAGAACACGAGACGGAGTACGGCAATAGCGCAAGCGCA
CATTCCGCCACTATTAGGAGTCGCGCCCTTAGGACCGCAGCCACTTGACTCGGGCCATCA
AGTACAGTTCCAGATGATGGAGTCAGCGTTCTATCACATGCCCCACCCTTCAGACTCGGA
ACGTACAAGGGTCTACTTGCCTAGGAACATTTGTCGGACTCCTGAATATTACAATCAGGT
GTTATTACCCCATTCGGACACGGTAGAGTTCTTCCAGCGGTTGTCGACGGAGACGTTGTT
CTTCGTGTTCTACTACATGGAGGGAACGAAAGCGCAGTACCTCGCAGCGAAAGCGCTCAA
AAAACAAAGCTGGCGCTTCCATACTAAATACATGATGTGGTTCCAGAGGCACGAGGAACC
AAAAGTCATCAACGAGGAATATGAACAGGGCACATACATCTATTTCGACTACGAGAAGTG
GGGCCAGCGCAAAAAGGAGGGCTTCACGTTCGAGTACAAGTACTTAGAGGACCGAGACTT
GAATTGAACCTGCGTCACCGAACCGCCGTCCGCACTCGCGTCTACTACACACCACCTGCG
CGCAGACCACTCGATAACTATACACGACATTCCTATATTTAGGAAATTTTTAGTTGTAAT
TACCAAAAAATACTTATGATAAAACAACTCGCACCGTTTTTTCTGTATGTGCATACGGGA
AGCCAGCCGTGTCATTCGAAATTGAGCACGCACCGGAATGCTCACAGGTTGGAACTCGTG
TGTACGTGACGTGTTCACGAGCGCTCACGTTTGTCAGACCGCGGTTCCGCCGTTTGTCAA
CGTAAGCTAATAATAAAAAACATGTACCTGAAATAAATTTCATGGACTGGTATTTATATA
GAGACAATGTTATGACGATGGTTTTACGGGAAAGATGTTTTAATGAACGTCGCATCGAGA
CGATGGAAACGGATCGCGATGTCAACGCGAGGGAACCTGAAGTTACTACTACATTATGAT
CCACGATAATAGCGTCGACCGGGACTAGTGATGCTATCGATAGTTTTATATCGATGTAAT
ACTTAAACGGCTCGATTCTATTATCGATTTAAATGTTCGGACACGAGATTTTTTTTGTTA
ATCATGAAGAAATCTTTTGTATAAACAGCTTTCTGGCAGTCAGTGATGTAGTGTTGTTGT
TGTTTTTTTTTTTTAAATAATTGAACAAAAAAGCGAAAGATATCATGTGATGCAGTATAT
TTAGTCAGCCGTGCGCGGTCGTTAAGAACTAATGTGATATTGTTATAAGCTCGGAACATT
CTTGGACTACTGTTAGATAAATTGTGAATGTGTGAAAGGCGTTGCGTGCGTAGCTATAAG
AGGTTCGATGTTGACAATTTAATAGTTTAGAATGTTGTAATTGCCTAGTCTGAATTCCGA
TATACGAACTTATCCAATAGTTTCTTTCGAATCAATTTATAGAATTGTACAGTTTGCAAA
AGCGTTGATGAATATAATAGACTTTTTTCCTAATATACAATGAGGTCTTTGAGTGACAAA
TACCTTCGCACTGTCTGTCACTCAAAGAACTATAAATAATCGATAATCGCGGATGATTAA
CGAATATCGATTTCTCACATACACTATCGATACTTAAGTTGTTGACACGATGTTTTCATT
AGTTTTATAATACAAATTAATAATTGAACACAACCACCACAATACTATAGATCTGTATTT
TTAGTATTCCATGTGTGATCTCGTGTTTAGTGAATTACACGCTCCGAGTTTGTTCCGAGA
CGTTTTTATAACTTCTGCTTTAGACGTTAAATTTTGGTTTTAAGCGCTGCGACGTGTGCT
TCACTTAGACTTGTTACGAATCTAAAATTTCATAATGAATGATAAAGCATAATCTGTAAT
TGTTTTTGTCTACGTGCGATTAGGTAATCCAATATATATATATAAATATAGGCGATTTTT
ATATTTGAAAAAACGGCAGACATATGTTTTGTAAATATTGGAAAATTTCAAAATTAGGCT
CGATTTATACCAGATGAGTTTCTCGAATACAAGATGAGATTAAGTTATTATCGGTGGCGG
GGCGTTTTGTGATCCGCCGTGGAGAGGTTTCCACCACTCTGCCAATTTCTGCTACAAAGC
CGGGACAATGTAATTCAATGTAATTGAAGACTTTTCCTCATGCCTCACAGTGCAGGCTTT
CATGTTATGATGTCTGCGTGTTCTGGATACCATTCTAATACCAGGCTGGTCGTGAACATG
TTTACTACGATAAAACAAGGTCGAACTTTGATATATGTATAGCTTCTGACTCGTCATAGA
CAAGGAGTTTTACTACACTCTTTTCAAACGACAACATAATGTTTGTTTACACTTATCAAA
ATATTATCGAGTGCTATTCTCGCTTGTACCTAGTCAGGTCATAAATTCTG
(4250 bp)

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