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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp67254_c0_seq1
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		PREDICTED:_fibril-forming_collagen_alpha_chain-like_[Bombyx_mori]
Ontology
GO:0005201 F extracellular matrix structural constituent
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.24 TPM:0.42
ORF EntryO_BomoEE13741_5prime_partial:A_BomoEE_comp67254_c0_seq1
Sequence
(Nucleotide)
TCGGAGGACAGACCAATTGCACCGTACTTCCTGCTTGTTTGTCAGCTCCAACACCGACTC
GGCCTGCTGTACCACCGACCCCATCACGTGGAGTCCCAGGTCGTCAAGGAGACGAAGGTC
CTCAAGGACCGCCTGGAGTTCCAGGTGTCAACGGCGTACCAGGAGCCCCCGGCATTCCTG
GCCCAAGTGGTCCCATGCCCGATGTGAACGCATATTTGGCACAACTAGCAGCAACCGCTG
GCGGCGATAAGGGCCCAGCGTTTGACCCGTATCAGTACATGCAAGCTTCTGTTGGAGCAC
CAGGAATTAGAGGAATAGCAGGACCGCAAGGCCCGCCCGGCCCGCAAGGTTTTCAAGGTC
CAAGAGGAGAGCCAGGTGAGCCAGGAATGCCTGGACCACAGGGTATAGCTGGAGAAAGAG
GTCCACCAGGATTGCCTGGAAAAGATGGCGCTCCTGGTGAGGATGGTGAGCCAGGTCCAG
TGGGAGCCGCTGGACAGCCAGGCCCTCGAGGTTCGCCGGGAATTCCCGGTATTCAAGGGC
TGAAAGGTCACAGGGGATTCGACGGGAAAGACGGTGCAAAAGGAGATCAAGGGCAACCTG
GTGAAAAAGGACCTACAGGACTGCCTGGGCAAATGGGACCTACAGGACTTGTGGGACCAG
TTGGCCCCCGAGGTGAACGTGGTCGTGAAGGGCCTCCAGGTCCTCCTGGAATCCGAGGTG
CTGATGGTGCAACAGGATTACCTGGGCCAGTGGGTAATGTTGGTAAACCTGGTTCACCAG
GCTTTCCCGGTTCCCCTGGAATAAAAGGCGAACAAGGTGTTGTTGGACCTAAAGGCAGCC
AAGGTCTTCAAGGACCTAGAGGAGAATCAGGACGTCCAGGGACTACAGGCGAAGCTGGCT
CTCCGGGAATCCCTGGAAATGATGGAATTCCTGGTGAAAAAGGTGTACAAGGGCAACCGG
GGCCTTCGGGGCCTCAAGGTTTCCCAGGACCAAGAGGGACTCCAGGAGTAGCAGGTGATC
CAGGCATGCCAGGATCTAAAGGAATGCCAGGCCAACCTGGTGAAAGAGGTACAAAAGGTG
ATGTTGGTATCAGGGGAGAATCGGGTGCACCTGGACCTAGAGGTCTACCAGGTTCGGTGG
GAGCAGAAGGCAAACGTGGTAAACGTGGTCTAAGGGGACCTGCTGGTAATGTTGGACCTC
AGGGAGAACGGGGTTCACAAGGAATGAGAGGCCTGCCTGGTTTGGATGGTGCTGCCGGAC
CTAAAGGTCAACCTGGAGAACGAGGTGGCTTAGGATTACCAGGAACTAAGGGCAGTTTGG
GGGACCCTGGTAGACCCGGTAGTCAAGGCTTGCAAGGCCCAAGAGGAGCTATCGGAAGAC
AAGGTATACCGGGAAAAACTGGGCCGCAAGGTGAAAGAGGTATACCGGGTGCTGATGGTC
GTCCTGGCGAACAAGGACCACAAGGATTGCAGGGACCACCTGGTATGATGGGAAACCCAG
GGGAACGTGGATTGCAAGGTGAGCCTGGTAAAGACGGTGAACAAGGACTGCAAGGACCTC
AAGGACCCAAAGGTGATGCAGGACGAGACGGTAGTCCAGGTATCCAAGGACCTCAAGGAC
CTCAAGGATCGGCAGGTGAAAGAGGGCCTCAGGGTCAAACTGGACCTACAGGATTTCCGG
GAATGCCTGGTACCGCTGGACAACCTGGTTCTCCGGGCAAAGAGGGGGAGCCCGGTATAG
CTGGGCCGGCAGGTCCTCCTGGACTAATCGGACCACGTGGTGAAAGAGGATATCCTGGTG
AACGTGGACAGCCCGGACAAGCTGGTACTCCAGGAGAGAAAGGAGAAACTGGTTCTCAAG
GAGCAGACGGACCACCGGGTCCGGAAGGTGCTAGGGGTAGTAAAGGGCATCCAGGACCAA
TAGGAGCCATGGGTATGCCGGGGCCTAGAGGACCTACAGGTTTCGCTGGCGAGAAAGGCG
AAAGAGGAGCAGCTGGACCGAATGGCGTTGATGGACCTCCAGGCCGTCAGGGTGATCAAG
GGCCGCAGGGCCCAGTAGGGCCAGCTGGTCCTCCTGGAGAGCCGGCTGAACGCGGAGAGC
CGGGTACTGCAGGAGTCCCTGGGGAGCCTGGAGCTCCGGGTTCTACTGGCGAAAGAGGGC
AACCTGGCTTACAAGGATCCCCGGGACTGCCAGGATCTCCTGGACTAACTGGAATGCCTG
GTCTTAAGGGTGATAGAGGATATAGCGGCCCCAAAGGACAGCAAGGATTACCTGGAAGTC
CAGGTGTACCTGGAGAAATGGGCTTGAGAGGACTGCCTGGAGTGGCCGGTGCTAAAGGTG
CACGGGGTGAACAAGGTCACAAGGGGGATCCAGGTCATGCCGGGTTACCTGGGAGACCAG
GGGATTTGGGTCCTCCGGGACCTCAAGGCAGTACTGGACCTGCAGGAGCAGCAGGTATCC
AAGGAGCTAAAGGAGCATCCGGTGAAGCCGGTCGTCCTGGTCCTCCTGGGCCTATCGGCT
TGACCGGCTCTGCAGGGCCAGAAGGACCTAAGGGCGAACGAGGGAGTGAAGGAGAACAAG
GGCCGCAAGGTCAAGCTGGACCACCTGGATCAGCTGGCGAGAGAGGGCCAAGTGGCTTAC
CGGGTATGGTTGGACCTCCAGGACCGCAAGGACTACGGGGTACACAGGGTGAAAGTGGTA
CACCAGGCAAACCAGGCGCAGATGGGGCACAAGGCTAACCGGGAGCTCCTGGGCTTCAAG
GACCGCCAGGTCCTATGGGTGAACCAGGACCCGAAGGGAGACCAGGAAAACAAGGACAAC
CTGGAATATCTGGCCGTCCAGGTGACAAAGGACCTATAGGACCCCCTGGTTCTTCAGGCT
CCCCTGGATTACCTGGAATGCAGGGTCCACCTGGACCTTCTGGACCAACTGGGCCAACTG
GCGAGCGGGGTCCTAGAGGTGAATTAGGCCCCCCG
(2975 bp)

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