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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp67232_c1_seq3
Scaffold_idBomo_Chr2
NCBI non-redundant
(nr)		PREDICTED:_talin-1_[Bombyx_mori]
Ontology
GO:0001726 C ruffle
GO:0003779 F actin binding
GO:0005178 F integrin binding
GO:0005200 F structural constituent of cytoskeleton
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0007016 P obsolete cytoskeletal anchoring at plasma membrane
GO:0007044 P cell-substrate junction assembly
GO:0007155 P cell adhesion
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0017166 F vinculin binding
GO:0030054 C cell junction
GO:0030274 F LIM domain binding
GO:0030866 P cortical actin cytoskeleton organization
GO:0032403 F protein-containing complex binding
GO:0032587 C ruffle membrane
GO:0042995 C cell projection
GO:0051015 F actin filament binding
GO:0070062 C extracellular exosome
GO:0070527 P platelet aggregation
Transcript
Level		FPKM:3.13 TPM:5.46
ORF EntryO_BomoEE13722_complete:A_BomoEE_comp67232_c1_seq3
Sequence
(Nucleotide)
TTTTTTTTCATTAGTAAGACATTTATTACACATGTACCGGCCGCTCTTGCCGCAGCTACC
TTATATATTAATTATCATACGTTAAACTCTCAATAAAATACAACAATTGACGAAATCGTA
TTTGATTACATTTCTATTATTATTTGGTATTATCATTAATAAATGAGATTATTTAAATTA
CTATATAATATAATGATATAAAAACTGTTAAATTAATAATAATTGTAACAAAATTAACTG
TTCATAATTTGTTTTCAGACAAAACGAGTAAATGCTTTGGGAACGATTATTTTTTATATT
TAAACAATTCGATTACATTATTTTTTGTTAGGAGATGAGCAGATATTGTTTGTAGTGTTC
GTCGCGTCGTGGACAGCAGTGACCATAGAAGCACTGTGAGGATCAGAGAACACCGCCATC
TACCGTAAAATACTAAAAACAAATTATTTACAGAATTTTTAATTCATATAAGAATTCATA
GAACATCTCTGAAGCAAAATAGAGTATATTCGTCTCGCTCACACGAGCGTTACCGTGCTA
TGTGTGCGAACGAGACGAATGTTTTGCAACTTATTCCAAACAAATTAGTCCGGGTCAATA
TAGGTTCTGATTGAACAGTAATTAATAGAGAATTTATTATTTTAAGTTAATTGCCAGTCG
AGTCGGAAACAAAGTCTTCCTTTTCCTCAACCCCGCGCTAACAGCTGCCATTTAGCGCAT
CGGCAAAACGCGCATAAAAGGCGGTACAAAATAACTTCTTTATATATATTTATACGGAGA
TAGAGCTACCACAGTCGCAATAAGTTTTCATATACAGTCGGCCGCGCGTCCGGCGCCACA
TGAGCTGCACGTAAGGCACATTTCATCATAAGACTCTCGAATCAATGCTGAGATACAAGA
ATGATTTGAACTAATATCAGTGGGGGTCGCGTCGGCACCTCGAGTCATGTCGCTGGGGGA
AACATTAAAACAAAATTTTTTTTTTATACTAAACTTAAGAAATGAAATTTTTAAACTTTT
ATTTTTGAACAAAATCGGTGGGAATTGTTTTCTTGTAACATTTAAACCGGACGCGCGACA
CTAAGCGATCTCTCTGTCGTCGTCTGGACAACAACACAACACCCATAAATACAAATATAA
AGAAACATATATATAGTTTTTAAGCCTTTATTTTAGTAGTAACTTTAAAACATCAATATA
TTAGTTGCACTCAAAGTTAGTCTGTGTATATACTGCTTAATTATTTGCACCGACAGATAC
ACCACATGTAAATATTTGACTTGTTATTCAACACATAACTCAGTGGGGTGTTAACATGTG
AGGGACCCTAGAGCAGTGTGGGCCTCCGCCCCTCCACTCCGACAAGCTCTACACCGACCT
AGTCCTGCCGTGTCCTGGTGAGGTCAACCAAAAACCTCACTAAAACAACAACTCGCGGAA
CCACAGACAATAACAACAGCTTTTTATAAAAATAGATATATATTAGTCAATAAATTTGAA
TAGTCAACATGGCACACACAATATTTCCTTGGAACGTTAACAATAAGCTCTGCGGATGTC
GGCGCCCGCGGACCACATTCCACACGCAACACTACACTAAACATCACTAAGCAAATAAGA
TAATATAATAAAAAATTATAAAACTGCCATCTGTTGTCAAAATATTAAAACATTTTCTTA
ATTAATAATATAAATTTTAAAATAACAAAAAAAAATTGTACATTAAAAAAACACAAAAAT
AGCTCGCCATTATCAATGAGTGAGGAGCGCGGCGGGGGCGCAGTCCGGGGCGCCCGGGGC
CACTTTGTGAATAGCTTAATGTACGAAACAGATTTAAGACTATGGCTCAATTTATTTTTG
TATGGCGATCTGTAACAATGCCTTTTGAATTTCATAAGTTCCCATTTATAGAGCCCTATT
GAGCCGCACTGTTATCAACCGTCGTCCGCGAGACACTGGGCCGTGCTGCCCAGGGACAAC
AGCGCTGACGCACGCTTGAAACGGGCCAATTATTTGTTTACCCAAAATCAACTTTAGATA
AAACCTTAGATCTGTTCGTATTTACATATTACGTTATTAGATTATTCAATAAAAACTATG
AGTGAAGTAAGCTCGACACAGTATTGTTGTATTAAGGCCTCAGCTTTGGAGCCACTTTTA
GGAATGAAACTTTTATATAAGAACTTTTATCTATTAATTAAAAAGTGTACAAAATATGAA
CAATTCGTGCGTTATTTCTTACAAGTTGGTTGAATCATTATGACACATTACTCATAGTTT
TTAAGAAATAAAGATAAGTTTTTTTTTTATAATAAAAATGACATCAAAAACATTCAATAA
ATTACAGTTAAGGCATTAGTTTAGACACCTAGTTCACGATAACGTTTAGCACCTTACGAT
TTTCTACCAATTTAGTAGAAAAAAAAAACCTAATGTTTCTACTAAGTTCAGTAGAACACA
ATGAAAACCTTAAAAATAAGATCTACACTCGATTCTTAACGACTAAGCACGGATCATTGA
CAATAAGCACAGTCCTTGACAGGTGTCACGGGTGACAGCTGTCAACGCACGAAGCACGCC
ACGACAAGTTGCGTCATTTACCTTCTAGAAGTTCCCGAATTTCTTGGTGACGGTGGAGCT
GGTCTCCGATTTGTGAGAGCTGGTCATTACGGACTTCCTTTCGATAGTCTCCGAGGTGAT
CGTTTGCTTTGAGATCCTCTTGTCCAGGCTGTCGATCTCCTTCGACAGATCCGGCTTCTT
GATCTTCGTCACGTTGCTGGTGGTCTGGTAGTCTGACGACTGGAACTCCGACGGCCTCAT
GAAGGAGCGGCTCGTGTCCGAACTGAGCTTGGACTCTAGCGTGTTGAACCTCGAGTCCAG
GGTGCTGTACCGGGAGTCGCTGTCGAAGGTCTTCGAGATTTCGTCGATTCCGTCCAGTTT
GATCGGCTCGTACTTGGTGCTGGTGGAGGTCAGGTTGACGGGCGACGAGCTGTATATCTT
CGTTGTAGTGATCTTCTGGGTGCCGTTGGGTATTTCTTTGACCTCCGTGGTGGTTTCCTC
CATGTAATTGGGACCTCCGTAGCTGTCGCCCTCCTTGGCGTAGGGCGAAGCCATGCGCTC
GTAGTCCGGCGTGGCGGCCTTCACCAGGTCACTGGAGGTGGTCACGTAGCTTGTGCGATC
AAACTTCGGAGTGGATGTGAATGGAGATTTCACTTCCTGCTTAAATTCCGTTTTGGAAAA
CTCCGTCTTCGGGAACGACTGGTAAGATTCACTTTTGATTGTGTATTCTGAATGCTTGGT
GCCTCCGGGGATGGACTCCGTGGACCTCTGGTGCTCCGAGAACGTCTGTCCCAAACCGTC
GGAGGGTTTCTTCAGGGTGGAGTATATCGGCTCGGGGTGCTCGTCGAATTTAAGCTCTCT
GGCGTTGAACTTAGGGCTCAGGGGCGTCCTGGGCGCTTCGTAGTCCAACTTCTCCTGCTT
GTATCTGTACTGGCTGGTCTCCTGTCGCTCGGTGGTGGAGTGCTCGGCTACCGGTCGCGG
CGTGTCGTACATTCGAGTTTCGTAGTTTAGCGTTATCCTCCTGGGGGGCGGCGGCGGGGG
CGTCTCCCGCTTGTAACGGACCGTGTGTGGCCCGGGGTCAGCACCGACAAGCAACGCGCT
ACGCACTTCCGGCAGACGAAGGCTTTTCACGACCACCGTCTCGTCGGAGGCGCTCGCGCG
TGTCGTGAAGGCTTCGTAGTTCTGCTTGGGCGCGTCCGGCGCCGGACGGAAGCTGGAGAA
CGTCGGGCTGGTGGGCTGCGGGGGGGCGGGGCTGCTGCTGTTCTGCTGTCCGTAGGAAGT
GGAGTTGAGTCCGGAGCTGTGCGTGGTCTGCAGCAGCGAGCTCTGGTGCAGCGTGGTCTG
CTGCGAGCTGTTGGGGCTGTACGTGGTGTTCGCGAAGCTGCTGTTAGGAGTCCGCACCCG
CTGGGGTCCCGAGGAGTCGCTGCCGTAGCCGGGCTGCGGGTCAGCGTCGGAGTCGTCAGC
GTCGCTCCTCAGCTTGTACTTGGCCTGCCTGATGGCCGTCAGCCTGCCGCGGGCCTCCTC
CAGTTCCTTCTCGATGCGGAGCACTTCCGACCTGGCGTCGATCTCCTGCGCGATGCCGCC
CACCATGCGGCGGTTGAGCACGAGGCTGCGCTCGTCGTCGCAGTGGATGGCGTCCCGGGC
GGCGCGCACCAGGTTGTCCGTGGAGCGGATGACCTCCGCGCCCGCCGCCTGCAGCCGCCG
CGTGCTCTCCGCCCCGGGGTCCGCCTTCACCTTGCAGGCGACGAGGAGGTGCGCGGTGGA
GGAGGCGACCTGCCTGGCGCTGGAGATGAGGCGCTCCTCGGTGGCGGCGCCCTGCACCAG
CGCGTTGGCCGCCTCCACCAGCGAGTGCGTGGCCGCCGCCACCAGCCGCGCCGCGCTCAC
CAGCCCGCCCGACCACGACCCGTCGTCCGACGACATGGCGGGCCGGCGCGCCACGGCACC
CTGGTCGATGAGTTCCCGCTGCGCCGCGGAGGCAGCCCTGACGAGGGCCGACGTCGCAGC
TATAATGGACTTGGCAGCTTCCAAGATCATTTCGTCGAAGTTCAGAGTCTCATCGGCTTC
CTGCTTCACTGGTTTCCTGGGCCGGAGCGAGTCCAGCTTCTTGGCGGCCGCGTCTATGGA
GGCGGCGGCCCCCAGCAGCTCGTTCTCGGCTATCACCGTGGGGTCGTCGGGGTCCACCCA
GTCCGAACCTTTGAGCAGTTCTGCGGTGGCGATGATGTCGGCGACGGTGTGCGCCACGCG
GCGGGACAGCTCCGGGAACTGCTGGCGCGCGGCGGAGTCCCCGGTGGCGGCCTGCAGCAC
GGCCTGCAGCAGCGCGCGGTAGGCCTGCGCCGCCGCCA
(4898 bp)

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