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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp67218_c0_seq3
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_U4/U6_small_nuclear_ribonucleoprotein_Prp31_[Amyelois_transitella]
Ontology
GO:0000244 P spliceosomal tri-snRNP complex assembly
GO:0000398 P mRNA splicing, via spliceosome
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005687 C U4 snRNP
GO:0005690 C U4atac snRNP
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
GO:0046540 C U4/U6 x U5 tri-snRNP complex
GO:0060041 P retina development in camera-type eye
GO:0071011 C precatalytic spliceosome
GO:0071339 C MLL1 complex
GO:0097526 C spliceosomal tri-snRNP complex
Transcript
Level		FPKM:23.79 TPM:41.49
ORF EntryO_BomoEE13705_complete:A_BomoEE_comp67218_c0_seq3
Sequence
(Nucleotide)
GGATCGGAAACGCGACCTACTGAGGAGATCCGGCGAGAAACTTAGTGGGAGTTCTCATAT
GAACCACTTGTTTCGTCTTACATGAAGTGTGTCCGAAACAGAAAAACTTGCACATTAAAT
AATTTAAACATAAAATTTTTTATTAATAAATTCTTCGTTTGTTTTTTTAAAGTTTCGTAT
TTGCAGCGCTGTTGAAAATTATATTTAAAATAAAAAAAATGATCCAGCTATTTCTGGTTA
TGTCATGCAGTTTAAAAATAAGAATTTACAGAAAAAAATATATGGATTAGAAATGGAAAA
ATATCAAACCTTTTGTTACAATAAATGGGGAATGAATACAAAACTGTAAAACTGTGAAAT
CTGTATTTACTCTGGCTTTAAATCGTGGAAATTGCGAATGCTATTAAATTCGGCTTTTTG
AACAATGTTCATATTTATTTTATTATTATAAAGAACATTCTTGCATGTAAACCTTGAAAT
GGTGTAAATTAACAAAATCCGAAAATTTTATGCATAGAAATGTGTAGAACGTGACTTAGT
GTCTTAAAACCTCTGTATTTTGTAGCATAATAATATTATGTTCTCTGAGGATGGCTCTGA
AGACTTATTCGAGATGATCTCATCATCTCCTTTTTATCACGGTAATTCCAGCTACCGGAG
CAGAATTCATCCATTCTAGTTGGCAATGCAGCGTTCATCCACAGAGCGTTTCCAATGATA
TGTAGCACGGCACGATATGAACTGAACTTTAAAATGAATTCCCCTCCACAGTATTTCTCG
AGCGTTATGACATAATAATATATTTCTTTGTTCTTCAAACGCCGTATCAGGAGAGTTTCA
GCGGAAGGAAAAAAAGTGGAAAAAAAAAACGCAAAATATTTAATTTAATCAGATTTCTTT
CCCACAGATAAGAACCCGGATGTATTAGAGAAATACTTGGCATTGCCTTCGTTGGTCCTA
GTTTCTGCGGCTTGAGGATTGACGATTTCCAAACCCTGTAGAGGCGTGAAGGCCACAGAA
GACGCAGTACCAGATACTTGTCTTCTAATACTGGTAGCACCGCCGTACTGCTGTTGTTTC
TGTAAGTTCTTTTGCAATGTCTTGCTGATGCGGACCTTCGTTTTCTCGTCGATTTGCGGT
AGTCGGATTCGGCCCGTGCTAGACTTGCCGATCGTGCCTCGCGTGTATCCTAAATCTTCT
TGGTACGCGTCATCTTCGATGTCAGCAAAGTTTAGTCGGTTGGCGTTCTTCCTGAACTCG
GTCATAGCGTAACGCTCCTTCATCTTCCTGACACGTTTGCCGCCTCTCTTCTTCCTGCTT
TGTTCGATCGGCTTCGGTAGGGGTTTCACGAACTTCACCGGTGGGGGTTCCTGTAGTTTA
TCTAGTTTCTTTTCGATATTTTCCCGTAGTTGCCGACCGATGTGCCCATCGGTGCTCTCG
TGGCACGCGTCCACACGGGCGGCTAATGTTAACTTAGTCGACACTAATTTCGCAGCTTTG
TACCTTAATTCAGGTGTTGTATCTTGTACAATTTGTGAAAAATAAATGAACCCAGTATGA
GGTAGAGCTGTTGCTTGCGAGAAGCCTGACAGTGTCTTCTTCTGTTGCCCGAGAGGTAAC
ACATTACACGCTGGCATCTTTGATAATTTAGACAATCCACCGGCCACACCAAGGATTTTT
GCTGCTGTTGATGCTCCAACAATGGCAGTTATGTTTGGTGCAATAAAAGTCATTCTACTT
TCAACATACTCATATATTTGCGATTTGAAATTGTTCAGCTCACTTGCCATATCACAGGCC
TCATTGATTTCTTCTAGTTCAATTTGGCTTAGTAATTTCCCTTGAGTTGTAGATGCAGTA
ACAGAAACAATCATAATAGTGGCCTGAGTAAGAAAACTCTGTAATATTTCATTATTCTTA
GCCCTGTCCAAATCATTGCCAAGTTCTTTCACTGTCCTTATGTATTCCAATGGAGTGATG
ATTAGAGATTCCAATTCAGGAAACCGTTTCTGATATTTGTCACGGACAAATCTGTGAATA
ATAGCTATTTCACCATCAATTTCAACAGCAACATTATTTGCTTCCACAATCAGTTGATAC
TCAGGGTCAGACTCCATTAAGCCAGCAACTTCAACCTTATTTCTGTTATTTCCAGCATTA
CATTCTATTTCACTCATAACACGTTTCAGACGATCAGAATATCTTAGTTTCGCGAGTTCT
CTTATCGAGACATTCTTGATTTCTTCTTCTTTAGGTAAGACGGGATATGGAACTGCAAAG
TCGTATTCTTCTTTGGTTTTGCTCTCGATAGCAGCTTCGAGTTCACCATCGTCATTTTCT
TCTAAATCAGCAAGTAATTCGTCAGCTAGAGACATGCTTCTGTAGAACTAAATTGATTTT
CTGAGTGTTAAGTTTATGTGTGAGCTTGTTCTGTTTCTATTGTATTCTGTAATATTCTAC
AATTATTACAGTTTTTTACTCAAATCGACTTTCACAGCTATACAGTATATTTCATTTAGT
ATACATTATAGATATTAATTTGATTTTTTAGTCAGCGATGTCATTAAACTTCAATAGTTT
GTACCCAAAACTAAATGATTTACCTACCTATGTACCTACGGCGACTAATA
(2630 bp)

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