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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp67216_c0_seq1
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		PREDICTED:_cyclic_nucleotide-gated_cation_channel_beta-3_isoform_X1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0001750 C photoreceptor outer segment
GO:0005216 F ion channel activity
GO:0005221 F intracellular cyclic nucleotide activated cation channel activity
GO:0005222 F intracellular cAMP-activated cation channel activity
GO:0005223 F intracellular cGMP-activated cation channel activity
GO:0005249 F voltage-gated potassium channel activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0007601 P visual perception
GO:0009187 P cyclic nucleotide metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030553 F cGMP binding
GO:0042391 P regulation of membrane potential
GO:0050896 P response to stimulus
GO:0055085 P transmembrane transport
GO:0071805 P potassium ion transmembrane transport
GO:0098655 P cation transmembrane transport
GO:1902495 C transmembrane transporter complex
Transcript
Level		FPKM:1.13 TPM:1.97
ORF EntryO_BomoEE13701_complete:A_BomoEE_comp67216_c0_seq1
Sequence
(Nucleotide)
AAACAACTTCGGTCAGGCCGGGCGTGTTTGCACGCGGAAAATTCCGATACACGAATTTTA
CCTCGACATGTTAATTTTCCCGCGTCTGTTTACGTGCTGCGTAAATATTTAGGTGGCAAA
ATATGAACAATGAATGTGAGATGTTTTGAAAGAATAAAATGGAGGTAACAGTCGATGTGC
ACACAGTTCATCCTTCAACATCAGACCGTGATGCTAAATATGGAACTAAGACCCCATTGG
CCCGTGGGCCGTATGGTTCTTGGTGTACGCCAGAGACCTCGCCCATTCATCACCCGTTGA
CGCAAACAAACTCGAACATCGAAACAAAAACTCAGCTTCAAGATCAGAAACGGTTTCTAG
AAGCGAACAGTACTGTCTTCCCGCTGCAGAAAGTCAGACTTTTCTCTACAAGCCCTCCTC
CAGACTATATTTCGAGCATAGAAGATAAAAAGGCCATAACTGAACTCAAAGAGCTAAAAA
AAAACTACATCACCAAAACAACTTCTGGTGATAAACCACCGCCAATTCAAGAGGAACCGG
ATTGCGAACCGGAGTATCCGCAGAGTCCTATACCAGCCTCCCCGACGCGGTACACGAAAT
GCAAGGGATTCCTTCTATCCACATTTTGCGATCCGTACATGCCAATCGATCCTCAAGGTC
GTCTCTACATAGGATGGCTCTGTCTAGTAACATTCTGCTACAGTTACAATGCTTGGGGGA
TAGCTCTACGCTCTACATTCCCTTACCAAACACCAGAAAATACGCCCATGTGGTTGGCAG
CCGACTATTTCAGTGATCTAGTGTATCTGTTGGATGTCGCATTCGTGAAGCCAAGGTTGA
TGTACTTACACGAAGGGTTCTGGGTCGATGACCCCGTCGAAACCAGGAAAAATTATAAAA
GGAAGGTTCAATACAAGTTCGATGTCATCTCGCTCACACCCCTGGACGTGCTATATTTCT
ATTTCGGCACGCAGAAAGCGATCCTCCGGTTCCCGAGGTTGCTAAAGCTGCAAACGTTTT
GGGAATTCAATCAGGCGATGGATCGAGTGCTTGCCTCGCCCTACGTTGTCCGTATAGGCA
AGACATTGTGCTACATATTCTACTTGATCCACTTGAACGCGTGCGCGTATTACGCGATGA
GCGACCACATCGGGCTCGGTTCGAACGGTTGGGTTTACGACAACGAAGGCATCGCCTACA
TCAGATGCTTCTACTTTGCAACTAAAACGGCCACGTCCATCGGGAAGAATCCGAAGCCGG
AGAACACGATCGAGTACCTGTACATGACCGCGGCCTGGCTGATGGGCGTGTTCGTGTTCG
CTCTGCTCATAGGCCAGATCCGGGACATCATCGCGACCGCAACAAGGGCCAGGACAGAGT
ACCGCAAGGCGCTGGACGGGTGCGCGCGCTACCTGCGGCGACTCAACCTGCCGGCCGCGC
TGCAGCGCCGCGTCACGCTCTGGTTCAACTACACCTGGAGTCAGCAGCGATGCTTCGACG
AGGCCAAAATACTGAACTGGCTTCCGTCGAACATGAAGCGGGACGTGGCGTTGGCCGTGC
ACATGTCCACGCTCAGCAAGGTGCAATTGTTTCGTGACTGCTCGGACTCTCTACTCCGCG
ACTTGGTGCTCCAGCTGAGACCCGTATCGTTCCTGCCCGGGGACCTGGTCGTGAGGAGCG
GAGACGTGGGGCACCAGATGTACATCATCAAGACCGGAGAGTGCTGTGTAATGTCCCAGG
ACGAGACCGAAGTGCTGGCGACGTTAAGGGAAGGATCCGTCTTTGGAGAAATCAGTTTAT
TGGGCATCGAGGGACTGCGACGGCGGACGGCCACAGTTCGGTCGCGTGGATATTCGTCCC
TGTTCGCGCTCTCCCGTAGCGACTTGGACGCAGCTTTAGAGTACCACAAAGAAGCAGCCA
AGGTTCTCCGCATAAGGGCGGATCAAATCATCAGGGAGAATGCAGCAAGACAAACCAAAC
AGAGGCTCGCTGCGTTGGAAGCCAGGAAATCCGCTGAACTAGCGAAAAGACAGGAATCGG
CGCTTAGAAGGAAATCTACCGTCTCTGGTCACAGCAATGCCACTGAAGGACGGAGACTGA
GGGCTCCCAGTGCGACCTCCAAGCGAAGGTTGTCCACTGTCTCCGAGAAGAAGAATCCTC
GGGCGAGAGGCTATCGAACTTTGGCATCGACGTGCACCGGAATACGGACTCCGCTGCCTA
CCATTGTATTTACAGCTGAATAAAAATATACAATAAACGTTTCTAGTCATATAGACTCTT
CATTAGTATGTTGTGTATCCACTCTAATAATATCTAACTCTAACTATAATTATTATAATA
GGAATAAAGTATTAATCATATTCTGTGAAAATTATACGTTTTATGACATTAAAATGTCCA
TTAGTTCCTTCAGGGGTGTGTTATAAGAATTTCTAACAACACATTCAGTGCCAAATATTA
TTTTTCAAATAATTGCAATTCGCTTTTTTTTGTTTCATTTATATCATCAAACACTTTTAA
TATCATGCCGTTAATGGAACACTTTAATTATTTAATTCATTTTCTATCAGTTATTCACAT
TCACAAAAACATGTTAATTTTGTTTTATTCAATTAACATATACCAGAGATGAAGATAACT
TAGACAATGTTATTTAAAAAAATTAAAATAGTGTCATTGGAATGTGTCCCTAACAAGTTC
TAATTATACATAATCCAGCTCAAAATAAAAGGCAATACGTTACTTTAAATAAATACGTAT
GTACCTATGGAAAACTTTTTGGCGGGAACGGCATGTATTTCATTTTGACAGTTTAGTATT
TCTTCAGATCATAGATAATAAATACGCTTAAAATGTAATGAAGGAGGCTCATTTTTCGTT
CAGTATTTGTAACTTTGGAATATTGCTTAGCTAATTGGAACAAAATCGCGGGACATAGAT
TCCTATATAGTTTTATATAGAGCATGTAGAAATAATTAGAAGAATTAACAAAGGATAAAT
GGTCGAGTTACGGTGGGCGAAAACAAAATTTTAAAAATATGTGTATCATTACTTAATTCA
TCTGTGAAATATACGCTATACGTAAATAGATGTTTATTTTTTAAAATTTTAGATTCTTAT
ACGTAACTATAAACTGCAATTATCATTTATATGTGTGATGATATAGATA
(3169 bp)

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