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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp67138_c0_seq1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_probable_E3_ubiquitin-protein_ligase_HERC2_[Amyelois_transitella]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005856 C cytoskeleton
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043547 P positive regulation of GTPase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:4.70 TPM:8.21
ORF EntryO_BomoEE13594_complete:A_BomoEE_comp67138_c0_seq1
Sequence
(Nucleotide)
GGCGCGGCGCGCGCTGGCCGCGTCGTGGCCGCTGCTGCTGCCCACGCCTCAAGTTCGGGC
ACATCATCTCATTTCCTTATTGCCTCAAGGTTCAATGCCCGCTAGTGCAGGCGCACGTTT
CATGACAGAGCTCCTGGTGTGGTCTCTGCTGGGGGGAGGAGGTCTACGTGACGCCGTACG
GAATGCTTTGCAAATTCATTCAGCCGAGATGTATAACCATTTGCAGCTTGATAACGAATA
TGACCAGGTGGATATAATAACAGGACAACGTGGTCCTCCCGTATCGAAAACCGGCGACGA
TCCTGATCAGGTCACCGGGTTCTCTGAAGAATATCATCTGAGCAACACTGCAACATCGGA
CAAGTGCGCCTCCGTACCGCTCATGCACTTGGTGAAACATTTGATACGAAATACAAGCTG
TCAGACACAAACGTCCATAAACGCAATAATTAATGGTGATCCCAGCAAGGTGGATGAGCC
CAAGGGCCAAGACGCCGTCAGCCCCAGCTGTGATCTACTCATACGATTTCAAAGGTTATT
GTTCTGTGAGGCGATGTGGTGTCGCGGCGGCCGCAGCTCGCGCGGCGGAGTCCGCTCGCT
CCTGAACCAATACACGGTTCTACTGTCCGAGCACGTACAGTCGACGCTGAGCTCGTTCTC
GCGAGCCGTGCACGGCGCCGACAATACCCAGCTCGTGGCTCTGTGTGATCTGCTAGCTTC
TGACATTGTCGGTCGCGTTGTGACGGAGTTGAGCGCATGGATATGTGCTTGTTCGGCGCG
GTCCGCACACGCGCTGTCCGACTGCGCGGGCTCGCTCGTGAGGATAGCGCGCGCGTGCGA
CGAGGCGGCCCGCGCGTTACCCTCGTCCGCGAAGCTAGACGCGGACCTGCTGGGCTGGCC
CGGCCTCGTTTCGAAGAAACACCAGCTGAACAGTAGCGTTATACGCAAATGCGACTTACA
GAATCATATAAAAGACGGCGGTTCGTGGATAATAGTGGCCGGTCACGTTTTCGACGTTGA
GAATTTCGATTGCGAGAACGCGAGCACGGTGGAGTTGGTCCGCAAGTTGCGGGGCGGCGA
CGCGACCGCGGCCCTGAGCGTGGAGCCGCACGCCGCATTCCTAGCGCGGATCACTGAGAA
GTGCGTCGGCCTCTATGCAGATCAGATTTATAGTCACAAATGTCATGAGAGTACGTCCAG
TCTTCGTGCCCATCACATCCTGTCGTCTGTCGCGTTCCACGTCGCGGTGGGGCTGGCGCA
GTGCGGCTCGAGGCTGGCGCGGTCGCTGCCCGTGCAGCAGGCGGAGCTCGACGCCGCGCC
GTATGCAGCGGCTGTATTCCTGCGCGGGGGAATGCAGGTATCGCAACTGACAAATCCATT
TGAAGAGGAGAAAGCAGAAGCTCGCAGTGGATCATCGACAGGCGGCAACAGTCCCGCCAG
CGAGACTCCGGCGACGACCCGGATATCTCGGCCGCTACCTCGCGTTAACGTGGCTTCGTC
TCCGGCCAGAGCTGAATCTCTATTGTTTGCACTTGCTGAGCCGAAGCTACACGATCCGTT
AGCACTTCATCTGTGGTGGGCGTGTGAACGTCACGAAGGCTGTGCACCACATTTCCCTCC
GGAGCATCCACTGGAAGAACTGCGTCGCGCTTTACTCGCTGTGTTATTATACCATGCTGG
ATTAAAGGAACACGCCTTAGCCACTGCGAAAGCCGAAATGGAGAAAGGTGAGGTGAAACT
TTCGCCGGCTATGTTGGAGATCGTTAAAGCTGTGCAACAAAGTAAATGGACATTGATGAG
GACTAGGCAGCAGCTGTCCAGGGGCTATAAGGAGGTTTGTGCAGCTCCGCTTGAACGCGC
TCGATTTCTTCTCCACGAAATTCGTCCCGCCATGTCTCCGGCCGTTAATGCATTACGTAA
TCGGCCGCCGTCGCATCGACCTCCTACGGCCAAAAGAATATTCCAGAAGGTCATGCGCGT
AGCTAAAACACCTAGTTTCAACAAATGTTTTGAAACCACCAAGGACCTGCGAAACCGACA
AAACAGTCTAAGTAAGAGCATGTTCAAAGCTACCGGAAGTCTCTTACAAGGAGACGCGCT
GCTTATAAAATCGTCGATAGCCAACGCCACGAGTAAAACTCCTGAAGACATCACCCCAAG
CATCGTGATTGAACCATTTAAACCCAGCGAAGGCGCTAGTGACGTAAGGGAACCTAAACT
AAGAGTTAAAACCAAAGATAAACTATTAGAGAAAGATCTGAAGAATGCCTGCAATTATGA
TGACATGAGAAACGAAAGTCATCGCGCGGCAGATAGAGATGACATACTTGACCGGGACGA
TGATAAAACTCCAACCAACGAGATATCTTTCAGTTCAATAAACGATATGACTGATAATTC
GGTGTTCAAAGACTCTATAGAAAGCGAGAAACAAGTGATACTGCTCGCTGACGATCTCAA
GAATGACTTGATTATGGCTGACGAAGAAAAAGACGACGATACTTCAGAAAGAAATAAGTT
TGTGAATGCGTGGGTGTCTAGGCTAGCTGGTGAAGAGAAAGATTTGCACTGGCTGTTAGA
GTCGGTCACTCCCGAACAACAGAGTTTAACGATAGCTATTATAGACTTCGTAATGACTGA
AGAAACCTGTGATATAGATATATTAAGACGAGCCCTGTATTGTCAGGTACAGCGTGCCGA
AATAAGAAGAACTGGCTACAGTATTATAAACAGCATACTACATTCCTCACAAACGATGTC
GGAAAGTGTCAAATACGGAGCTCTTGTTGGATTGCTGGGTGCTTCGATGGCCGAATCAGT
ATCTGGTGTTCCGCTAAAACCTACCATACCGTTAACACCTCCGTTGGACTCTATAGAATC
TGTGATACCGTATTCCAAGTATATGGTGCTTCTAGAACGATCGAAGCTGATGGATTTCGT
TTTGATTGAATTGAAAGCGAGGGTTATGGAAGGGGAGCAGCATCAGACGCTACCGACGAA
AATGAGTGCTAATTACGGTGCACATGCATTATTGAATCGACCTTCTAGAGCAAGGTTTCT
GATAACTTTACTATCGCTTCTCACCGAAGGCTGTCAAGGGCCGGAATTAGAACAGCTGAT
AAATGGCGGCGCACTAAGTTCCTGTCTGACGTTACTGAAACAAATCGGCGGTGATACATC
TCAATATTCATCCCTTATTACTAACGGACTGAAAAGTAAACCGGAATGTCTCATTATTTA
TGAGGATGAAAGATTGGGAGCCAGGGCTCGTGGCGCGTCATTATCAGGACCGGAATTGGC
TTCTTTGATGAAAATTGGAACGAGGGTAGTAAGAGGAAAAGACTGGAAATGGGGTGACCA
GGATGGCGTACCCGGCGGCGAAGGTCGAGTAATTGGTGAGCTGGGTGAAGATGGATGGGT
TCGTGTAGCGTGGGATGCGGGCGGCACAAACTCTTACCGAATGGGGAAGGAAGGCAAATA
TGATTTAAAACTCGCACGTTCACCATCTCCACCGCCCTCTATTGACGAGACTGTGCATGG
AACAGTGGAAAACAACATAGAGTGGTGGCCCGTGAGCGAGGTCCGTTCGGCGTGTACGGG
TGCTATCCGCGCGCTGTGTGCGGGCGCGGGCCGCCAGCTGTGCGCGCTGGGCAGCGTGGC
CCGCAGGAACGTGACCGCTCTACAACGGCGGCTGCTCACGTTAGCGCATGCGCACGCCAC
TCCGCCGCCTACTGCCTTCGCCGCTAACTACCACACCGCTCTGGCTTTACTTAGAGCAAG
TGCTCAAAGTCCAGAGATGAGGATATCTCTATGTACAGACTCATGGTTTGAACTATGCTA
CAGTATCATATCAACTTCGGATAAACCTATCACTTTAGATCACATCTATTTACAAATACA
ATCCCTCTGGCTTCTGCGCCGAGTATTAGTTGAGCACAGTGGGTCTCCCGAATGGCGTCG
AACTGTAGCAGCGCAGTTACTTGCGCTCATCGGCCGGCTGTGGCTAGAGACACATTCTTG
GGATCCTGCTCTAAGATTAAACCAACAAGCGTTCGCAGCCCATAATGATGAAGAGGAAAT
AGACAATAGATGGCGCGCCCCGGCTACGGCTAGCTACACAGGGGGTACGTGCGCCGCCCT
CGTGCAGCTCGTGCGGCAGCTACACACGGCAACACAGTGGCACGCCCCAATCACAGCTTT
ATTACTAGAGAAACTACAGTTGGCAGCTCAAATGGTAACAAGCGACTGGCATTGGTGGCC
ACATGCAAGTCAAGAAATTACTCAAACTGTTAAGCCCACTCCGCCTAGTCTCGAGACTTG
TCTCATTGCTGGTGCTTTGGGAGTGATTGGGGGAGTGGAATGGAGAATTCGGATTGGTCA
GCGTGTGTCCGCCGGTACACCTCCTCGTAACGGAATAGTGATACAACTGTCGTCGCGAGC
AAAAATCTCCTTGATGCACGACGATAACACTATTGTGAAGACTGAATTAAACAGCATTCA
GAATTCGGAATGTGAGCGTTTGGCTCAGCCGCTCGGAGGAGGCGAGAGCGCTCTGCGGGT
TTGCGCGGCTTTACTGGGAGCCGGACCTCAGGCCTCGCCGCTGCATCCGCATCACTTACC
CGCTGAAATTGACGTTTATGGTCTAAGAAAACAACAAATAGAATTATTGACGCTGTGTGC
GGTACGAGGTTTACTCACAACACGAACGCGACTCCGGAAAGTTCTGATGCAACCACCGGA
TAATTCAGGTACATCAGAGAGAGCATCTACTTGCTTGGGTACAGAAGGTACATTACTCCG
GCGACTGTTGGCGCTAGCGACACGGCCCAGTCCGTTATCCGCGTCGTACACTCCGAAGGA
ACTAGCCGCGGCCGCCCTCACCATAGTGCAGCAGCTAGCTGCTCATGTCAATGGTGACGA
AAAGGATCACGAAAGCTCACCGGACATGCCAATTATTGATAAAAGTAACGTAATGCATGT
ATCGGTGGGACCATCTACCAGTACTGCCTCTCTGTCAAGAAAAGATCTTAATACATGGGC
TAACTCATCTCAGGTGCAACAGGTTATTGAGATGGGATTTTCAAGACACGCTGTCTATGG
AGCTATACAAGCTTTAGGTGGAACGAGTCTCCCGTCAGTCGAAGCTCTCGTAGCATATCT
ATTAGAACTATCGCAACAAGGTATGGACGATTCCGTTTTTGAAGTGAAACCACAGCCAGC
TAAACAAGATAAGAAACAAACGCCGTATAGATGGCGCAGTTGTTTCGCATCCGAAGACGA
ATACTCGCAGTACTTATCGGATGTGATAACACCGGGCATGACTGTACGCTGCTGTAAGGC
GTTTGAAAGTGTGGCACTTGGTGATGTTGGGCAAGTGCAGAAAATTGAACGGGATATCAA
ACAGAACGTTTTTCTTCACGTCGAGTGGCGTGGTCTGGGGCGCGTGGCCGGCGTGCGAGC
CGTGCACGCCGAAGTAGTATCGGGGGCGCCGCCATTCGCGGTCGGCGACAGAGTAAGGGT
GCGAGCTGCAGTCACCCAGCCCCGGTACAAATGGGGTTGCATCGATCACACGAGCGTTGG
TACTGTTACAGCGGTATCAACGAACGGCCGCGATTTGACTGTCGACTTCCCTCAACAACC
TGGATGGACCGGACAAGTGAGCGAAATGGAACTAGTCACCGATCAGTCGGAATGGAGCGA
AAGTTCTGGAGGAATGACGGTCGGCTGGCGGGGAACCATTCGTGCCGTGAGAGTATCGTC
ATGCAGGCTCGGTGCTGGAGCAAGGAGACTGCTTGACTCACAACCCCACACTTACTGGCA
AAGTTCTAGTGGGACCGGACAGCACTGGATTCGTATAGAGATGCGCTGCGGCGTGCGCGT
CCGTCGACTCGGCCTAGGGGTGGGCGGCGGCGTACACGGTCCCGCGGCGCTGGCCGTGCG
GGCGGGGAACAGCTTCGACGACAGCGCACTGGCGCCCGTGGCAGCCCTGGTGTGCGCGCC
CTCGCCGCCCAGGGACAGACCGTCAGCGCATCTGGCGCAGATACAGCTTGTAGCTGACTG
CAAACAGTACTATCCATGCATTGAGATCGGTATTAAGCAGAATAGAAATATTAACGCAGA
TTGTCGTGTGCACGGACTGTACATAACCGGCTTCAGACCAAACCCACTATACACTGAAAT
ATTGCAGAACATGAATTTTGTAGCTGAAGATTGGATGGAAAAGGATTGTCCATCAAGTGC
AATTTCCGTAGATAATAATCCTCCAATTTTGCCAAACGATTGTCCTAAGGTATACGTCTG
GGGATTGAATGATAAAGATCAACTGGGAGGCGTGAAAGGTTCCAAAGTAAAAGTGCCTGT
TTTCTCACCTGTGCTAAGCGCCTTGCGTCCCGTGCATATCGCGGGTGGATCTAAAACGCT
CTTCATTGTATCTCACGATGGAAAGCTCTACGCGTGCGGTGAAGGCACGAACGGGCGCTT
AGGCCTAGGGCACAGCAACAACGTGTCGACGCCGCGAGCTAACCCGTACTTATCACATGT
GCTCGTGCGGAAAGTAGCCGTACATTCTGGAGGGAAACACGCCTTAGCTCTGACTGCAGA
CGGAAAGGTTTACTCGTGGGGTGAAGGCGAAGACGGTAAACTAGGTCACGGAAACCGTTT
GACTTTAGAAGTGCCGCGTCTCATAGACGCGTTGTCCGGAGAGCGCGTGGTCAGCGTGGC
GTGTGGATCTGCTCACAGCGCCTGCGTCACGGCCCGAGGACATCTCTACACCTGGGGCCT
CGGAGAGTATGGGAGGCTGGGACATCGTGATAATATTACCCAGTTGGTACCTAAGATGGT
GGAAGCCTTAGCTAATTTTAGGGTGATACAAGTAGCTTGTGGATCGCGGGATGCGCAAAC
GTTGGCATTGACGGCTTGCGGGAAAGTCTTCTCGTGGGGCGATGGTGATTTTGGAAAATT
AGGTCGAGGTGGGTCTGACGGGTGTGCAGTACCAATGAACATAGAAAGATTGAATTCCCT
TGGAGTTGTTCAAGTCGAATGCGGTGCTCAATTCAGTTTGGCTCTGACAAGAGACGGCGA
GGTGTGGACGTGGGGCAAGGGAGATTATTTTCGGCTCGGTCATGGCTGCGACGCTCACGT
GCGTCGCCCGACACTCGTCGAAGCGTTGCGCGGCCGGAGAGTCGTTCACGTCGCTGTGGG
AGCCTTACACTGTCTGGCTGTAACTAGCGATCATCAGGTGTGGGCGTGGGGCGACAACGA
TCACGGTCAGCAGGGTAACGGCACGACGTACGTGAACCGTCGGCCGGCGGCCGTGGCGGG
CGTGGAGGGCGTGCAGCGAGCGGCGGCGG
(7349 bp)

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