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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp67097_c1_seq5
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		PREDICTED:_transcription_initiation_factor_TFIID_subunit_4_[Bombyx_mori]
Ontology
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0001092 F TFIIA-class transcription factor complex binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007517 P muscle organ development
GO:0008134 F transcription factor binding
GO:0022008 P neurogenesis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0048813 P dendrite morphogenesis
GO:0051123 P RNA polymerase II preinitiation complex assembly
Transcript
Level		FPKM:0.28 TPM:0.49
ORF EntryO_BomoEE13552_5prime_partial:A_BomoEE_comp67097_c1_seq5
Sequence
(Nucleotide)
GGCGTCAACGGAGTTTTTGGAGGAAGCTTTGTCCACAGACGTCGACGAGAAAGCCGTGAA
CGCGATCGTGGGCACTCTCGAAAACCAATTAGTTACTAACGTATCGTCGGCGCCGTCACA
AAATATTTTAGTGAACGTTTTATCATCTCAGTTTCCCGGGCTAAGTTCGAACGCGGGCTC
TATTATAAGTGGTCATAAATATACAACAGGCGGAGTTAGCTGCGGTATTGCCGCGAACAG
TATACACAGACCCTCGTTGACAAATAGCACGTCCTGTAATAATGTCCAATCAAGTGTTCC
TGGTACTTATTCCTCTTTGACACCGGGTGGTACTGTGACCAATTGTAACGATAACATACA
AGTTATATATTCTCAGGCTCAAGCATTTTCTAACCCAAATTCGGTGACATTTCCCGCTCA
GTCACTTCCGAACGGTTTCGTTGGGTTGTCCTCGTCCCAAAATCATTTGATAACGTCAGT
AGACGCGATGCAACCTCCTTTAGTTTTAAAACAGGGGACGTCTTCGGGCCAAGTGGGAAT
ACAGTCTGGAATGGTCACAGTACCGATGACAGCCAATTCAAGCATGTCCGGTTCAATACC
AAATGTAATGACTTTGAACAAACCTGGACAAAATGTAGTTGTAACAACTCAGAACTTGGG
TTCGAGTCAGCCCACAATACTCCCTAATGTTCAGATTCTGAATATGAGAGCTGGTGCTCC
AGCAGTTGCGGCACAAAAGTCAGTAGCAACAGTATCACCAAGAGTAGTGATAGGCACCCC
ACAAGTTGTTGGCACCAGAGCTGCAGGACCAGGCATAACGCTGCAAACACTACCAAGTCT
ACAACCGGGCCAGCAGGGTCATTTGTTGTTAAAGACAGAGAATGGTCAATACCAGTTGCT
GAGAGTGGGTCCCGCTCCAGCGGCCAGCTCTCTCACGACGCCCCAGCCTCAAACCATCAG
GCTGTCCACTGTGCCAGCACATCCTGGCGTCGCGACGGTGTCAACAAGCATGGCCTCCAG
CCCTATACCGGGTCAGATGCCAGCTGCGCCGATGGCAACGCCTGTTATACCAGCATCTAT
ACCAAATATAAACTGCGGTACGCCTCCGCCTCAATCTCAACCCCCAACGGTAACAACTGT
TAAACCTTCGGACAACACTAAGGAAAAATGCCGTAATTTCTTAGCAAATCTCCTGGACTT
ATCAAGCAAAGAGCCTCCATCAGTGGAGATGAATGTACGGAATCTGATCCAGGAACTTAT
CGACGCCCAAGTTGAACCAGAAGAGTTCTGCAACAGACTTGAAAGATTACTTAACGCGAG
TCCTCAGCCCTGCCTTATCGGATTCTTAAAGAAAAGCTTGCCACTGCTCAGACAATCTTT
GGTTACAAAAGAGCTTGTTATTGAAGGAATAAACCCTCCAGCGCCTCACATAGCTTTCTC
TACGATGCCATCTCCCGCCCAACCTGTGGTGGCCACGTCCAACATACAATTGCCTTCAGA
GGAAGATGGGTCGAGTCCCACGCTAACGCCTCTCCTGCCGCCGGTAATGCCGCTCACGCT
GGCCAACCTGACAAAGCCTATTAACGTTCAGTCACTGCAGACGACAGCTCCCACACAGCA
GCAAAAACCACCATCGAAACCGGGCAGTACGATAGCGGTTCTACAGAACATTCCTGTGCA
CACCAAGATCAACGTTAGCAAAGTCAGTAGCGGCAAGTCGATGCAGTTGAACAACAAGGG
CGCCTTCCCGAGAGGCCAATTGCCTTCAGCTGCTTTATCAACCGTACTGACTCCTGGCAA
GTCGCTTCTGAAAGATAAGGAGAAGAAATCTTCTAGTTATTCGCAACCGTTCACCGACGA
CAAGATGGCTGGCGATGACGACATCAATGACGTAGCGGCCATGGGTGGAGTCAACTTGGC
GGAGGAGTCGCAGAGGATTCTCGGCTCCACGGAGATGATCGGAACTCAGATTAGATCGTG
CAAAGATGAATATTTAGTGCCGACGAGCGTGATGCAAGCCAGGGTTAAAGCCATAATAGC
ACGACACAATCTCGACGAGCCGACGGGGGAAGTGGCAGCCCTCATCAGTCATGCAGTACA
GGAGAGACTTAAAAATCTTATCGAGAAACTAGCTGTGATAGCTCAGCACAGAATCGATCA
TTTTATAAAGTCTGATAGCCGTTATGAAGTGACTCAAGATGTAAAGGGCCAACTTAAGTT
TCTAGAAGAATTGGACCGGGTCGACAAGAAACGCAGGGAAGACTCAGAGAGGGAAATGCT
TCTTAGGGCTGCCAAGTCTCGATCGAAGAACGAGGATCCCGAACAGGCGAAATTGAAGGC
TAAGGCGAAAGAAATGCAACGTGCCGAGTTGGAGGAGCTTCGTCAAAGGGAAGCCAACTT
GACCGCTTTACAAGCTATTGGACCGCGAAAGAAACCAAGACTAGAAGCACCAGGCGCCTC
CGGAGACACAGCCACTCCTGGACCGCAGACTACTGGATTTCCTGGCCGAAGTCAACTAGC
CCTCCGGACTCGTCTGAAGCGCATCAATCACCGTGACATGCTATTCCTGCTCGAGCAAGA
GAGAGACACCTGCCGATCGTTGTTGCTTTACAAGAGCTACTTGAAGTGACCCGCGGCCGA
AACCTACACTAGGAGCGACGTCGACCGTTACATCGACTGGCTCGCGACCAGATACGATGA
TTGAAAACGTCACGCTCCTACTGTAGCGTACGTGTGCACCGAAAGTGTTACACGTGAGAA
CTGTCTAAAAATTTAAACGCAGTAAAGTTATTCCTGATGCTGACCGAATGAATTGGAGAA
TAATGTTCATACCAATGGAATGATGAAAGCGTTTTGTTATAGTATCCTGATTTGTTACAA
TGCTGTATCATTGTGTACAACAGTATACAACAAATGCTGCGTCTTAGATGGCCGAGACTA
ATGAGTATTCAAATATTGACTTAATACCGTCGTGATGTTGTATTTGAAGCAAGCCTTAAT
AATGATTCTAGTTAAACGGTGACTATGCGTAACTTGTTGAATAATAACTGATTCATAAAT
TTGAAAACATGTGCAACGAATAATGCAGCAGGTAGGTTTATCATTCGTCTTTCGTACAAA
GTCAAAATGCCTTGGAACTCGATTTTTATTGTATGGAGTCCTTGTTGATGTTATATAAAA
ATTTAATTGATATACAATAATAACTACATGATGGTTAAACTTGAGCCATTCAATACATTA
AACAGTCGTTTGATGAACCGATTTTGGTCGATATGCACGGTATGACAAATAAAGTGATTG
TTTTAATAATAACATAGAACTCTGGTAGAATTGATGGAAAGTATAGTTGTTATAAGCGTT
ACGACATGTATTGAGACTAAGAAGATATTGGGCTAAGAGCAGCGCAGTGACTGTCTTGGT
AATGATTATGATCACCTTTCAGAATAAGTTGCCTCTCGAAGGAAAGAGTACCAGAATAAC
TTATTCTAAAATTGTGAACTTTCGGGCTCCTTAAATTATATATAACTGATTAGTTAGGAG
TATTCAGGTAATAGATATAACAAATGACATATCGAGGATATAAGGAAGCGTGTCGGAGTG
GAAAAAAGCAACTTGTGGTCGTCGTGGCTTAAAGGATAAGATGTCCGGTGCA
(3652 bp)

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