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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp67097_c1_seq3
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		PREDICTED:_transcription_initiation_factor_TFIID_subunit_4_[Bombyx_mori]
Ontology
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0001092 F TFIIA-class transcription factor complex binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007517 P muscle organ development
GO:0008134 F transcription factor binding
GO:0022008 P neurogenesis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0048813 P dendrite morphogenesis
GO:0051123 P RNA polymerase II preinitiation complex assembly
Transcript
Level		FPKM:3.75 TPM:6.54
ORF EntryO_BomoEE13550_5prime_partial:A_BomoEE_comp67097_c1_seq3
Sequence
(Nucleotide)
GGCGTCAACGGAGTTTTTGGAGGAAGCTTTGTCCACAGACGTCGACGAGAAAGCCGTGAA
CGCGATCGTGGGCACTCTCGAAAACCAATTAGTTACTAACGTATCGTCGGCGCCGTCACA
AAATATTTTAGTGAACGTTTTATCATCTCAGTTTCCCGGGCTAAGTTCGAACGCGGGCTC
TATTATAAGTGGTCATAAATATACAACAGGCGGAGTTAGCTGCGGTATTGCCGCGAACAG
TATACACAGACCCTCGTTGACAAATAGCACGTCCTGTAATAATGTCCAATCAAGTGTTCC
TGGTACTTATTCCTCTTTGACACCGGGTGGTACTGTGACCAATTGTAACGATAACATACA
AGTTATATATTCTCAGGCTCAAGCATTTTCTAACCCAAATTCGGTGACATTTCCCGCTCA
GTCACTTCCGAACGGTTTCGTTGGGTTGTCCTCGTCCCAAAATCATTTGATAACGTCAGT
AGACGCGATGCAACCTCCTTTAGTTTTAAAACAGGGGACGTCTTCGGGCCAAGTGGGAAT
ACAGTCTGGAATGGTCACAGTACCGATGACAGCCAATTCAAGCATGTCCGGTTCAATACC
AAATGTAATGACTTTGAACAAACCTGGACAAAATGTAGTTGTAACAACTCAGAACTTGGG
TTCGAGTCAGCCCACAATACTCCCTAATGTTCAGATTCTGAATATGAGAGCTGGTGCTCC
AGCAGTTGCGGCACAAAAGTCAGTAGCAACAGTATCACCAAGAGTAGTGATAGGCACCCC
ACAAGTTGTTGGCACCAGAGCTGCAGGACCAGGCATAACGCTGCAAACACTACCAAGTCT
ACAACCGGGCCAGCAGGGTCATTTGTTGTTAAAGACAGAGAATGGTCAATACCAGTTGCT
GAGAGTGGGTCCCGCTCCAGCGGCCAGCTCTCTCACGACGCCCCAGCCTCAAACCATCAG
GCTGTCCACTGTGCCAGCACATCCTGGCGTCGCGACGGTGTCAACAAGCATGGCCTCCAG
CCCTATACCGGGTCAGATGCCAGCTGCGCCGATGGCAACGCCTGTTATACCAGCATCTAT
ACCAAATATAAACTGCGGTACGCCTCCGCCTCAATCTCAACCCCCAACGGTAACAACTGT
TAAACCTTCGGACAACACTAAGGAAAAATGCCGTAATTTCTTAGCAAATCTCCTGGACTT
ATCAAGCAAAGAGCCTCCATCAGTGGAGATGAATGTACGGAATCTGATCCAGGAACTTAT
CGACGCCCAAGTTGAACCAGAAGAGTTCTGCAACAGACTTGAAAGATTACTTAACGCGAG
TCCTCAGCCCTGCCTTATCGGATTCTTAAAGAAAAGCTTGCCACTGCTCAGACAATCTTT
GGTTACAAAAGAGCTTGTTATTGAAGGAATAAACCCTCCAGCGCCTCACATAGCTTTCTC
TACGATGCCATCTCCCGCCCAACCTGTGGTGGCCACGTCCAACATACAATTGCAGCAAAA
ACCACCATCGAAACCGGGCAGTACGATAGCGGTTCTACAGAACATTCCTGTGCACACCAA
GATCAACGTTAGCAAAGTCAGTAGCGGCAAGTCGATGCAGTTGAACAACAAGGGCGCCTT
CCCGAGAGGCCAATTGCCTTCAGCTGCTTTATCAACCGTACTGACTCCTGGCAAGTCGCT
TCTGAAAGATAAGGAGAAGAAATCTTCTAGTTATTCGCAACCGTTCACCGACGACAAGAT
GGCTGGCGATGACGACATCAATGACGTAGCGGCCATGGGTGGAGTCAACTTGGCGGAGGA
GTCGCAGAGGATTCTCGGCTCCACGGAGATGATCGGAACTCAGATTAGATCGTGCAAAGA
TGAATATTTAGTGCCGACGAGCGTGATGCAAGCCAGGGTTAAAGCCATAATAGCACGACA
CAATCTCGACGAGCCGACGGGGGAAGTGGCAGCCCTCATCAGTCATGCAGTACAGGAGAG
ACTTAAAAATCTTATCGAGAAACTAGCTGTGATAGCTCAGCACAGAATCGATCATTTTAT
AAAGTCTGATAGCCGTTATGAAGTGACTCAAGATGTAAAGGGCCAACTTAAGTTTCTAGA
AGAATTGGACCGGGTCGACAAGAAACGCAGGGAAGACTCAGAGAGGGAAATGCTTCTTAG
GGCTGCCAAGTCTCGATCGAAGAACGAGGATCCCGAACAGGCGAAATTGAAGGCTAAGGC
GAAAGAAATGCAACGTGCCGAGTTGGAGGAGCTTCGTCAAAGGGAAGCCAACTTGACCGC
TTTACAAGCTATTGGACCGCGAAAGAAACCAAGACTAGAAGCACCAGGCGCCTCCGGAGA
CACAGCCACTCCTGGACCGCAGACTACTGGATTTCCTGGCCGAAGTCAACTAGCCCTCCG
GACTCGTCTGAAGCGCATCAATCACCGTGACATGCTATTCCTGCTCGAGCAAGAGAGAGA
CACCTGCCGATCGTTGTTGCTTTACAAGAGCTACTTGAAGTGACCCGCGGCCGAAACCTA
CACTAGGAGCGACGTCGACCGTTACATCGACTGGCTCGCGACCAGATACGATGATTGAAA
ACGTCACGCTCCTACTGTAGCGTACGTGTGCACCGAAAGTGTTACACGTGAGAACTGTCT
AAAAATTTAAACGCAGTAAAGTTATTCCTGATGCTGACCGAATGAATTGGAGAATAATGT
TCATACCAATGGAATGATGAAAGCGTTTTGTTATAGTATCCTGATTTGTTACAATGCTGT
ATCATTGTGTACAACAGTATACAACAAATGCTGCGTCTTAGATGGCCGAGACTAATGAGT
ATTCAAATATTGACTTAATACCGTCGTGATGTTGTATTTGAAGCAAGCCTTAATAATGAT
TCTAGTTAAACGGTGACTATGCGTAACTTGTTGAATAATAACTGATTCATAAATTTGAAA
ACATGTGCAACGAATAATGCAGCAGGTAGGTTTATCATTCGTCTTTCGTACAAAGTCAAA
ATGCCTTGGAACTCGATTTTTATTGTATGGAGTCCTTGTTGATGTTATATAAAAATTTAA
TTGATATACAATAATAACTACATGATGGTTAAACTTGAGCCATTCAATACATTAAACAGT
CGTTTGATGAACCGATTTTGGTCGATATGCACGGTATGACAAATAAAGTGATTGTTTTAA
TAATAACATAGAACTCTGGTAGAATTGATGGAAAGTATAGTTGTTATAAGCGTTACGACA
TGTATTGAGACTAAGAAGATATTGGGCTAAGAGCAGCGCAGTGACTGTCTTGGTAATGAT
TATGATCACCTTTCAGAATAAGTTGCCTCTCGAAGGAAAGAGTACCAGAATAACTTATTC
TAAAATTGTGAACTTTCGGGCTCCTTAAATTATATATAACTGATTAGTTAGGAGTATTCA
GGTAATAGATATAACAAATGACATATCGAGGATATAAGGAAGCGTGTCGGAGTGGAAAAA
AGCAACTTGTGGTCGTCGTGGCTTAAAGGATAAGATGTCCGGTGCA
(3526 bp)

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