SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp67031_c0_seq1
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		PREDICTED:_long-chain-fatty-acid--CoA_ligase_5_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:2001236 P regulation of extrinsic apoptotic signaling pathway
Transcript
Level		FPKM:6.53 TPM:11.38
ORF EntryO_BomoEE13485_complete:A_BomoEE_comp67031_c0_seq1
Sequence
(Nucleotide)
TCGTACGTTTCCAGAATTTAGGACACAGGATTCTTCAAGTCTCGTTTTCTTATTCACAGA
ATTACTTTCTTATTCGTAGCATTCCTTTCTCTAGCAATCTTCTATTAGGAAAAATGTCGA
TGGCTGACAACAATATAAGTTTTAAATAGCGATATACTTAATCTTTACGGAAGCGAGCCA
GTTAGTCATTTGCTTTTCATTTCTTACATTTAGCGCAAATTATTTAACCATTAGTGAAAA
CGGCATTGCAAACTTAAAGCCAACTTAAGCCGCGATTCCCAATAGTGCGAACTCAAAAGA
GAGAGGTGGCTGCAGAATGGGGGAGGCATATACGGTTTTAACATGGTTTGGCATTGTCGC
CACAGTCGGCTAGCACAGCGGCCGCGCAGAACTTGCGCACGCGCACTCGCGAAGTAGCCC
GCCCGGTGGTTTTCAAAACGTGATAACGTATAAGTGTTTACAAATACAGTTGCTGACTGC
AGTGCGCGGATCGAACCATGCCCTAGACACGGATGGGAATGCTAATGCAGCAGTAAAGCT
GCCTGTTTGGAAAACATGTGCAAAAACAACAAAATGGGAAGCGGTAGATTTGGTTTTGCC
GTTAACAAGAAAGACAAAGTGAATGTTACGAATGAAGTGAAGACTGAGTTTAGTGTTAAG
GAAAAATGTCAGAAAATACAGAAGAAACTAAAGACTGAAAAGAAGAAGACTGAAGACGCG
CAGGAGAAAACGATCTGGTGGAATCAATGTAGCAGTCTAAGCGAGATCGATCAGTATCTG
TGGATGGTGGGGGGCTCAGCTGGTGCTCTGGCTTTGACCGGGGTCGCAGCCGCATCGGCC
TTCTATCTAAGTACACGACCGAAACCAGAGAAACCACTCGTGACGCTACACGAACAGAGC
CTCCTGGAGTCTGGACCTGAGATGGTTCGTGTTTCGAAATTCTACAAAGACGCGAAGAAC
GGACGTTTCCTACGATATCTTCACGAGGATACACGCACACTTTACGACACTTTCCGACGA
GGCGTAAAAGAGTCGAACAATGGCAACTGTTTGGGTTGGCGCGAGGGTCCGAACAAGCCT
TACGTTTGGCAGACATATAATGAGACTCTACTGCGCGCAAAGAATTTTGGTTCCGGTCTG
CTCTGTCAAGGTCTCATTCCCGGTCAGACTACATTTGTCGGTATTTATTCGCAGAATTGT
CCTGAATGGATTATGACCGAACAGGCGGCGTATTGTTATTCGATGGTTATAGTTCCGTTG
TATGATACGCTAGGAGCGAACGCTTGTGCCTTCATTGTTAACCAAACTGAAATGGCTGTA
GTAATTTGTGAAGACGACAAAAAAGCCAATCTCCTACTGGATCAGTCGCCTCGATGCCTC
AGAAAACTGATTACAATTAAGGAAGTATCGCCGTCTACATTTCAACGCGCCAAGAGCCGT
GGTGTTGAGATTTTGAAGTTCTCTGACGTCGAAATACAGGGAGCTCAAAAGGACCATCCT
TTTGTCCCACCGAAACCGGAAAACCTTTGTACAATATGTTATACGTCCGGAACGACTGGG
ATGCCTAAAGGCGTTATGCTGACTCACGAGAACGTTGTAGCTTCGATGTGCAGCGTTACG
ATGCAACTCGGCGAGCATCGACCCACCAAGAACGACATCATGATCTCCTTCCTGCCTTTA
GCTCACATGCTGGAGCGATGCTGCGAGAATGCTCTCTACATGGTGGGAGGAGCCGTTGGT
TTCTACAGTGGCGATATAAGGAGGCTGGGCGATGACCTCACCGCTCTTAAGCCGACCATG
ATGCCGGCTGTTCCACGTCTCCTGAACAGACTGTACGACAAAGCCCAGACTGAGATCGCC
AACTCGAAAATCAAGAAATTACTTTTCAACATGGCGCTATCCGCAAAAGAATCGGAATTG
AAGAGAGGAATAGTTCGTGCTGACTCGATATGGGACAAGTTAGTTTTCCGCAAGGTTCGA
GAAGGTATGGGAGGACGACTTCGGATAATGGTCGTCGGATCAGCGCCTTTAGCAGGAAAC
GTACTGACTTTCGCGAGATGCGCCCTCGGTTGTTTGATCGTGGAAGGCTACGGTCAGACA
GAGTGCACTGCGCCGGTGACGCTAACAGTTCAGGGAGATCATGTTCCTGAACACGTCGGC
CCTCCCGTCGCTTGTTGTAAAGTGAAGCTAGTGGACGTGCCCGAAATGGAGTACTATGCG
GCGCAGGGCCAGGGTGAGGTTTGCGTGCAGGGAGCTAACGTCTTCAAAGGATACTTCAAG
GACGCGGAGAAAACCAGAGAGGTCATCGACCAAGACGGATGGCATCACACCGGCGATGTC
GGCAAGTGGTTACCTAACGGTACCCTGAAAATAATCGACAGAAGAAAACACATTTTCAAA
TTGTCACAAGGCGAATATATAGTTCCTGAGAAAATTGAAAACATTTACATTAGAAGTCAG
TACGTTGAGCAAGTCTTTGTTCACGGTGAATCATTGAAGTCCTGCGTGGTCGCTATAGTT
GTACCGGACGTGGATGTCGTTAAATGCTGGGCTTTAGAATACGGTATCAAAGGAACCTTC
TCATCTCTGTGCGAGGATGAACGAGTCAAGAAGGTCATCATGGAGGACATGCTTCAGTGG
GGCAGGAACGCTGGCCTGAAAACTTTTGAACAGGTAAAAGATATATACTTGCATCCGGAT
CCGTTTTCGGTACAGAACGGCCTACTGACGCCAACGATGAAGGCGAAGAGACCAGAAATA
CGAAGTTATTTCAAACCGCAAATAGAGGACATGTACAAGCAACTTGAATAACGGTAGCGA
GCACAATGCACTAATTAAACTGTAGAGGCATGCTGTTTGACGGAGACGAACTTTAGTGGA
TGGCTGTAATATTGTAATTGATAATGAATACTCGTACATACTTTGAATTCGATAGAAGAA
GAAGTAAATTCGATAACGCAATGTAATTTGTAATGAATGATGAGTGAATAAGTTGGGAAA
TTTGATTTAAAAAAAAAACGAAGCTTGGGCAATGTGGGGTTGTTTATCTTATTTCGTTGT
ATGTTTAAACGTGAGTCGACTATTATCAAAGCCG
(3094 bp)

- SilkBase 1999-2023 -