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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp67006_c0_seq5
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_cadherin-87A_[Bombyx_mori]
Ontology
GO:0001917 C photoreceptor inner segment
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005813 C centrosome
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006816 P calcium ion transport
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0032420 C stereocilium
GO:0032426 C stereocilium tip
GO:0042472 P inner ear morphogenesis
GO:0042491 P inner ear auditory receptor cell differentiation
GO:0045202 C synapse
GO:0045494 P photoreceptor cell maintenance
GO:0046872 F metal ion binding
GO:0048563 P post-embryonic animal organ morphogenesis
GO:0048839 P inner ear development
GO:0050953 P sensory perception of light stimulus
GO:0050957 P equilibrioception
GO:0051480 P regulation of cytosolic calcium ion concentration
GO:0060088 P auditory receptor cell stereocilium organization
GO:0060091 C kinocilium
GO:0060122 P inner ear receptor cell stereocilium organization
Transcript
Level		FPKM:0.30 TPM:0.52
ORF EntryO_BomoEE13474_complete:A_BomoEE_comp67006_c0_seq5
Sequence
(Nucleotide)
GCGGGCGGCCCGCGTCCTCGGCCACCACCACCAGCGCGTACTCGGCGCGCCGCTCGCGGT
CCAGCGCGCCGCGCGTGCGCAGTACACCGGTCCGCCTCTCGATGGTGAAGGCGGGAGTGA
GGTCATCGCTCTGCTGGATGTAGTAGTGGAGCTGGCCGGAGGGCTGCGTGGGGTCGTCTG
GGTCCGTCGCCACCACCTCGTACACCACAGTGCCCGGCGCTGTGTTCTCGTTGACGGTGA
GTAGTTCTCCAGGAGCGGGCCGGATGAACCGCGGCACGCCATCGTTAGCGCTGACGTCAC
CGATGTAGACGGCAAGCGACGCGTCAGCCGCGTGTCCGCCGGCGTCCGTCGCGCCCACCA
GCAGCCGGTACGGCGCCGTGCGGCCTCGCCCGGTCAGCGCGCCGCTTGTGTGAACCCACC
CCGACCGCGGCTCGATGCTAAACAAGCCTGCAGCTTCCCCCTCGTCAAGGAATTCGTATC
GGATCTCCCCCCCGAGCCCCTCGTCAGGGTCGGTGGCCGTCACGTTGATCACGCCCATTC
CCACCGGCACGTTCTCGGGAACTACAGCGGTGTAGAGGGACTTGTCGAAGGCGGGCGCGT
TGTCGTCCACGTCGAGCACGTCTATGAGCAGCAGCGCGGCGGCCGTGCGGCGGAGGGCGC
CTCCGCGCGGCACGTCACTCGCCTCCACCAGCACGCGCAGCACCGACTGCCGCTCCCGGT
CCAGATGCTTGTCTGCGCCTATCTGTATCGCTCCTGTGACGTTGTTGATGGTGAACAGCT
CTGAATTCTCTCCGCGCAGTGCATACCGTATATCCGAATATCCCTCAAGTTTGTCTTGTT
CAGTAAGAACGGCGTCTGCGTCATTTGCTTTCACCGACACGATATGTTCCGGATGCTTCA
CAGATTCAAGAACGCTCACTCTCTTTCTCGAATATCGGTGGATTGTCGTTAATGTTGATG
ACTTCAATTACTATCTTAGCTTCACTGTGCCGGGCGCCGTCACTACTCGTGGCCTTCACG
GTCAGTGTTAGGTTCGGGCTGGTGAGTTCCTCGTAGTCTAGGTGCTTAGTCAGAACCACT
TGCCCCGTTAGAGGATCCACTTGAAGTAATTCCGTCTCTGAATTGATAACTTTGTAGTTG
GACACCAGATGTCCCGAGACTGGGTCTTCAGCGGCGAGAACGAGCACGGTGCTCCCGATA
GGTTGGTCTTCTTTAATTTTGTGATAAATCAAGGGCCGCGACGTACTCCAACCAGGATTC
GTAAACTGGGGGTTTTTATCAGCATAAGGCTGTATGTAGATCGTGTGATCGATGGTGGCA
AACTGTTTGTCTTTATCTATTTCGGCGTTGACGTCAATCACCTTTACGGTTAGAATAACT
ATGCTGGCTTGATTGTAGTCCAGAGTTCCGTTGACCCGGATTTCCCCGGTGTCCTCCTCG
ATGTGGAACAAGTTGGCGTAATCATAGGGTGAGTTTGGCTGTAACTGGACGCCAGCCTTA
GAGAGCGCTCTCATCGGTTTCACAATACTGTACTTAAGTTTTGAACTGACATCAGTGTCG
AACGCTACTATCTTAGCGACAACGTCACCGACTTTGGTCTTCTCAGAGATGTACGTGGAG
GACTCCGTGAAATTGAACTTGGGCGGCTTATCGTTAACATCTTGTACGAGCACGAGCACC
GTGGTGGTGGCGGTCTCCGGCAGGGGCGTGCCGCTGTCCACGGCCGACACCACGAGCTCG
TAGCGCTCCGGACTCACGTCGCGGTCCAGGTTCGCGTCGCTCGATACGGTTATCAGTCCA
CTTTTTTCATGAATAACGAAGTTGTCTTTGGAGCCGGACACGATGGAGTACACGAGCAGC
GCGTCGAGCCCGTCCGGGTCGCTGGCAGTCACCTTGGTCACGGTGTCACCCGGCTTTGCA
TTTTCTTTAATAGTTGCTTTGTAGTTCATAGGATTCAGATCAAACGAGTATTCATTAGTA
TTATCTAGAGTCTGATTGTTCCCGGTGTGTTTGTACAGATGATAGTTCCCTTTGAACGTA
GGCCGTTGATTTCCCGGGACTCCGACTCTAATATAGACTCGAGTGTCGTTATGAAGGGCC
GGTATGCCGTAATCAGTTGCTCGAATAATAAGTTCATATTGTCCCCTCGGAGTGTCCATG
CTATCTAACTTATCCACAATGCTGAGCTCTCCGGTGTCTTCATCTATTTCGAACGCCCTG
CCTTTATTGTTAATGCTGTTATCAGATTCTATTGAATATTTAATGCGACCATTTCCTTGA
GTCGGCCCATCGACGTCTATAGCCTGAAAATAAATTTGTGAGAAACTTCATCACGATGAC
ACAACTAATAAAAAAGTGATACTTTAAAAACTTACTCGCAGAACGAGTTGTGGCTCGAAG
CTGGTGGCGCCGTCTCTGATGGTCCTGGTGTACTCGGTTGCCTCAAATATAGGAGCATTG
TCGTTGACATCTAACACATCGATGAAGATACTAGTGGATGAGCTTTTACCTCCGCCATCT
TTAGCGAAAAGTGTTAGACTGTAACTCTTTTGTTTCTCATAGTCCAACTCTTGCTGGACA
TACAATCCACCTCTTTGCTTATCAGTATTGAATAGATTGGATCCGAAGCCAGTCAAAGTA
TACTCAAGTTCTCCGAATATACCGAAATCTTTGTCTGTCGCTGCAACGTCTCCTACCTTT
GACCCAATGGTAGTATTTTCTAAAGTATCGAATTTATAAGTTGCCCGTTCGAAAACCGGA
GCGTTATCATTGACATCTAAAAGTTTAATATTGACTCTAGCCGCCGAGAGCTCCACGTCA
TTCAGTGAACTCACTATGTCCAAACTGAACAACCTGCCTTCATCACTGTCTACGTCGTAG
TCTAAGCGGGAAGAATCTGTTACTTTGATGGTGATTGGCGTTCGTCCTTCGCCGTGTTCC
GTAGTCACGGCGAATACATCTCTCGAATTAAGCACGTCCCGCAACTTCAAGTCGTATTTA
CTGTTTTGTCCGATATCATCATCTTCAACGTAAATAGATAGTCCTGGTATGGGGCTGCCG
TTTTCTATGTTTTCAGGTATTGAAATATCGAAGACATCTTTATTGAATCTCGGAGCGTGA
TCATCGACGTCCGTCACTATGATGGTGATCGAAGTCACCGTGTAGTCCGAGGGCACTTCG
TTGTTTATTAGTTCGGTAGCCTTTATGAAGAAAGTATAGACTCCTCCGTTTTGTAAAACA
GTTTCACTTTCTCTGTCGATTGGATTATCAGAAGTGACTAGTACACCGCGCCCTAGTGGC
TTCTCGGGGACCAACTTGAAGTACCCTTCCGTATCACCCTCAATAGTTAAAAGAACTGCT
CTCGGGTTGGCTGTGTCACCGTCTTTTGCTATTATTTCTAGTATACTGGTGTTTGTGGGC
GTGTTCTCTGGCACGGTGGCGGAGTAGGGCGCGTTGAGGAAGACGGGCGGCTGGTCCTGC
TCGTCCCGCACGGCGACGGCGACGCTGGCGGCGGCGCGCAGCGGGGACTCGGACGCGTCG
GCGGCCTGCAGCGTCACCACGTACGCCGACCTGCGCTCGTAGTCCAGCGCGGCGTCCACG
AACAGCCGCACCTCGTACTCGCTCGACGATAACACGACAGTCTCGACCCTGAAGGTGGCG
CACGCCTCAGCGTCGCTGCCCTTCTCCCGGGTGGAACACGTCACCAGGAGATTTGCGTTT
AGTCCGGCGTCTCGGTCTGTTACTAGTATTTTTGGATTTATCTGGAGCTCTGCCCCCACC
GGGGCCGCCTCGCTGATGTTCACTATGTAGGGCCGATTGAGGAAGACGGGCGGGTTATCG
TTGACGTCGGTGACCGGGATCACGCGCCTCAGAGACACGGTGTTCGGCTCCGATGACTCC
CTGGCCTCGTCAGTGATGCTGATGATGACCTCGAGCTGGTCCAGCTCCTCACGGTCGAGG
CTCCGCACGAGGGTCACCACGCCACTCAGTGCGTCCACCGACAAGTGTTGCCCAGATATC
GAGTACCGTAGTTGATCGTTCTCCGGATCGATGCCTTTGAGTTGATAAACGGGAGTCCCG
ACCGGCGTGTCCTCTGCGAGCGTGAAGTGAGACATGTCCCCGACTTGCGGCACGAAGTGA
GGCGCGCGGTTCACGTGCTGTGCCGTGACGTGATGCAGCACGGCAAGCAGCAGCAGGGGT
ACGGGCCAGCTGTCCGCCCCTCGCCGCGGCAGGATCTCTGCCATTTCCTATTCCTCGATG
TACACTCGCGCACAGAGCACGCACCGCTGACACGGTTCTCACTCGAATGTTATACGTCCC
ACTCAACCTTTTACATATACTTTATTTCTATTTATTATTATTTTTGCAAATTTAATTAAC
GCTTAATAAACAAACATGACGTTAGAGGTATCACTCCGCCAACTTTGAAAAAAAA
(4435 bp)

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