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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp67004_c2_seq4
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		PREDICTED:_cleavage_and_polyadenylation_specificity_factor_subunit_CG7185_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005849 C mRNA cleavage factor complex
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
Transcript
Level		FPKM:58.58 TPM:102.17
ORF EntryO_BomoEE13460_complete:A_BomoEE_comp67004_c2_seq4
Sequence
(Nucleotide)
AAAAAAAAAAAAAAAAAAAAACACTATTTTATACAAAATAAACAGGGACCGTATTGTCTA
ATTTTAACATCATACTCTATACAGAGTACAGAGTTACAACATCAATGATATAATTAATCT
GTGGCTGCAACTGACAGTTCGTATTTGACCTAAAGATCTTAGTTACCAGGTCATAAAATC
TCTTAAAAAAAAAATTTCATGGGGTCGTAAGTAGGAGGTAGCATTTTTTCACAACTTCGT
AAAATGGCGGACGGCGATGTCGATATAGATTTGTACGCCGATGATATAGAATCCGATTTT
AATCGCCAGGATGAATTTGCTGGCGAAAATGTGGATTTATATGACGACGTGATCTCAGCA
CCAGCTTCGAAGCCCGAGGACGGTGACGGTCCTCCCATCATTGCTCCAAACCAGCATCCA
CCTGAGGAAACTAACGGCAACGCCTCATACCACGGCCCGGTTCACGGACATCATGGCCGC
CGTTTTCAACTTTACGTCGGCAACCTAACATGGTGGGCAACGGACCAAGATATTGCGAAC
GCGATCTCGGATGTCGGTGTCTCCGATTTTCAAGATGTGAAGTTCTTTGAGAACAGAGCC
AATGGTCAGTCCAAAGGATTCTGCGTTATATCTCTCGGTTCAGATCAATCAGTCAGGATG
GTGATGGAACGTCTTTCTAAGAAGGAGATACACGGGCAACATCCAGTAGTTACATTGCCT
ACTAAACAGGCGTTGAATCAGTTTGAAAGTCAGTCAAAGACCAGGTCGACGCCTCCTGGT
CCCAATAATCCTGGAATGAGAGGACCCCATCCAGGCGGGCCGCCTGGTCCTCATCCCGGA
GAATTTTTTGGTGGGGGACCGAACGGTCCAGGTGGGGGCGGACCTCGTATGATGCTCCCA
GGTCCGGGTCCGCACCAGCTTCGTGGGCCGCCGCCGCACCACATGGGCCCACACCAGGGC
GGGCCGCATCCCATGCAACATCAGCCGCAGCCGCACCAGGCCCCGCCACACCGGCCCCCT
ATGCAGTTTGCGGGCCCTCCGCAGATGCAACGCGCGCCGGGCCCGCGTCCGCCGCCTCCC
GACTGGGCTGCGCGAGCGCCGCATCCTATGTCTCAGCCCGCGCCTCATTATGGACCCCCC
CATCATGGAATGCCGCATCAGATGCCACCACCTCATCCTCAACCCGGCGCACAGGGCATG
CCGCCTCCGCACCAGTTGCCGCCGCACCAGCCGCCGCGGGGACCGGCGCCCATGCCGCAG
CATCCTGTAATACCTGGAGCTCCAGCACCACACGTGAATCCTGCGTTCTTCAACCAGCAG
CCACCGTCGCAGCCGCCGCCAATGCAGGCCCCGCAACCTGGACCACCCGGTCCAGGTGCT
CCGTACGGTCATCCAGCCCATGGAGCACCACCTCCAGCACAAGGGCCTCCACCCGGGTCT
AGACAACCGTACGGTCGGCCACCACAGAGCTATCCGCCTCAAGCGGATCCGGCTCGTCCC
CCGCACCACCCGGCACCCATGGTCCCACAGCACGCGGCCTCCCTGGCGCCCCCCATGCCG
GTCATCAGCGAGGCCGAGTTCGAAGAGGTGATGAGCAGGAACCGCACCGTCTCCTCCAGT
GCCATTGCTCGGGCTGTCAGTGACGCTGCCGCTGGCGAGTACGCCTCCGCCATCGAGACG
CTCGTTACCGCCATATCACTCATTAAACAGAGCAAGGTGGCGCAAGACGACCGCTGCAAG
ATTCTGATCTCGTCGCTGCAAGACACGCTGCACGGCGTCGAGACGAAGTCTTACAGCAGC
GGCGAGCGGTCCCGCCGCTCCCGGTCCCGCGAGCGCGAGCCGCGACACCACCGCGCCCCG
CGCCGCCGCGACCGCTCTTCCAGCCGCTACCGGGACCGCAGCCGCGACCGAGAGGATAGG
GACAGGTATTACAGGGATTACCGTGAGAGGGAGCGCGAGAGGTCTCGCTCGAGGGATCGC
GATCGTGCTGATCATTACAACAGGGGACACAGTCGTGAGGAGAGGGCACGTAAATCTCCA
GCTGAAGCGACAGCAGAGGGAACCACAGCCGAGGCCGGGTCGAAGAGCCGCAGCACTGGA
GCGCCGTACTACGACGAGCGGTACAGGGAGAGACGCGACAGAGACCCGCCGCCCGCGGAT
CGAGATCGCGACCGAGACCATCGCAGGGACGCTAGACACTAGACACTAAAAGAACCATTG
AGTGAACTACTCAATATCGCCACATCAGCTGACCAATTAGGGCATCCAAGATTTTTTGCT
ATCGGGCCGGCGTCACGTTGAAGTGGAATTAAATTGACACTTGACAGTTCTGACAGATGT
TTGCGCGGAAAAGGGATTTACAAAAATGGCGCGAAAGTTTCTGATTCTAAATTCAAACAA
ACGATTGATTTAATTTAAAATAATTCGTTTGAGCAACGTTCATGCGAATCAAAATTCATT
GACTGCGCGGTTATATGTGGTGACACCGACATCGTTCCGTCAGCCTAGTCTAATCAAGTG
ACTTTTGGTGTAAACTAATATTGTGTGGTGCGTCAGAGGCGACGACCGCGTGCGTGAACT
ACTGATACTGCCACGAAAATAGCTTCAAATTGTTGATCAAAAGATGGTGGATCGAGTTGA
TCTGCTGCTAGGGCGGTTTAGTGTAATCGAGAGCCTGATTCGACAGATTAGATATTCATT
ATTTTCAACTTCATATGAAACAAACATCTCAAATTAAAATCGGTCTCATACATGAAACAT
TAAATAGTGATGGTAAAAATGATATCCATTCACACTGATGATGAAAATAATGTTATGTTA
ATTTAGATGACAAAATAGTTTATTACAAATTAGTAAGTATTATCCCGGAATGCCCATTTG
TCTCAGATATATCGTTTGTTTTACGAAAATTGGTTACACTCTTGGTACAAATCACTGTAC
TTATTACAGTCAAGTGTGACTGTAGAAAATTAACGTAAGACCTATCCAACGCCGACAAGT
CGTTTTCAAACATCTAATAATGTATTGTATTCATTCACGCATGGTATATTTATAAGGTTA
AAAAAGGATGATAAACTTTATATTTAAAACAGAGAAACATTTTATCAGAACACGACCAAT
AGCAAATTATCCAAAATTAGAAAAGTGCGCTAGTAATGAAAATTTTATTGAAAAAGGTCA
AAAATATCCTAGTATTATCTTGAATACTTTTGATACAATTGATAAAGATTAAAATATAAA
TAGTTTTTATTTCAAATAAACATTTTACACAATTATATCGATAAAAGCAGTTTTCAATCT
AAAGCCATGAAACATCTGAAAATTAAGATTGTGACTGATTTTATAATTTTTAGTATCAAT
ATTACTCATGTTGATTGTTAATGGATTGAATTAGTCCAACAAGAACCTTAAAACCAAATA
TGTTTAAAATTCAATTTTGCTGTTTGTCACAACATTCCATGGTCTAAATGTTTGCGAATT
GTTTTAAACTTTCATTCGTGGTTTTTTTTTGTATTTTCCTATTTTGTAGTAGTCTAAACG
TAAGTATTAGGTTAAGTTCAAACAATTTATGGATTGTTCCATACAAACTAGACGTGACCG
TAAATTAAGATGTAATTTACAATAAAATAAATTTATTTCAAAACATTTTCATTATTTATT
AAATTAATATATAAGTTACCAAACTGTGAGTGGGTACCTACTGGCTGCTGTTTCGATTGT
AGAAAGTCGATGTCGATTTATTGTAGAAAGAAAAATTTTGGGCCGTTGAAAGGACGGCAA
GTGTAAAATTTTTGGCCATCGGCACGTTTAGAACTGGTCAAATTTCCAACCAACGAATTA
ATTAGGTAATGCATATCCTACAGGTGAATTTCTACTGTCATTATCATCCTCTTAGGTCTT
GTGTATGTCAGAACCAGACGGTGTCCTACACGGCTTTGGCACGTCGATTAATATTGGCAA
GATTCATAAACTTTGATATGAGAAGTAAGTTTGTAGGAATCTAGTATAACTAAATCCACA
GAGTCGCTTCGGTCGCGTTTGAGAAATTTAACACAGTCGTAGAGGGATCATACGGGCTAA
ATCCAAGTTATAAAGTGAGAAGTGCTATTACTATTCGGGAGTTGAATATCTACATTTTAT
TAAATAAGTAATCCTTTAGTATCTAGTGGGTTTCAATTAGTTACGTTACCGGAATGTGAA
GAGTACATTTTTATTAAAAAGTTTCGAAGATTCATTGATTTTTTTTAATATAGTAATAAT
TAAATGGTCAGGGATCTAATCGAAATACTGTCCATCTG
(4298 bp)

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