SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp66972_c0_seq1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		PREDICTED:_probable_phospholipid-transporting_ATPase_IIB_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0004012 F ATPase-coupled intramembrane lipid transporter activity
GO:0005524 F ATP binding
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005886 C plasma membrane
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006897 P endocytosis
GO:0008152 P metabolic process
GO:0015914 P phospholipid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0045332 P phospholipid translocation
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.37 TPM:4.14
ORF EntryO_BomoEE13416_complete:A_BomoEE_comp66972_c0_seq1
Sequence
(Nucleotide)
AAAACTCGCACTAAGCACACTGTGCCCAGCAGTGGACGTGGGCTGGCTGATTATTATAAA
TGTTTAACTAAATATAATTGTCAATTATTTGATAATGAAAATTAAATCTATTATTTTAAA
TGTATACCGTATTTTAAATTGAGACAATATTATTATCTTATATATTATTTATCGAAAACT
CTATTCTGGTTCCCTAACTGTTGAGGTCTATGATCAGAGGAGATGCCTTTTTTTAACAAT
TGTATTATGTTTCTGTGAATTGTCAAACATTCTTAATATCGATTTATTCATATCGAGTAT
GTACGTATATTAACTAGTATAATTAAGTATGTATAATGTTACGTTCCGGCCGCAGCGACC
GTCTCGAGATGTTGTAGTCGTTTCATTCGGAACGTCGACTTATCGATCGCAGAATAGTTT
TCGTAACATTCTCATTTGCAATATAAAATTATACAACACTAGACACTTATCGTAATATTT
TGGGTACTTCAAACTATATATTTATAAATTATAGCTTATGTGTTATTCTGATGTGTAAGT
TATATTATTGTGAATTTTCATCAAAATTAATCCACTAGTTTTTGCGTGTAAAAGCAAGAA
ACATATATCCATACATCGTTACAATCTTTCGTGTTTACAATATTATTAAGATTAACTGTT
CAGGAATGACTTATTAGAGAAAACCGGGTCGACCGATGAGTGCAAGTTTGGATGAAATAC
AAATCGTTTTAATGTGATCTTACGGCCTATACGCTTAAGGATCACGTTCGAATGTTCTTG
TACTGGCGGTTGCTCCATTTCCTGTGCATGTATTTGACGATATACAATGGTAGACACGAC
ACTAGAGTTATCGTGATCACCTTCCACCAGAAATCCCAATGTCTTATGAAATCAGCGTCA
AAGTACGTGGTGAATATCAGCAAGGTTATTATGTACATGAGGAGGCTGACCAGCTCGGCT
CCGACCATGAGCCAGTGCCACGTGACCACCGTGAGGGCCACCATGATGAGCTCGGTCAGT
ATCAGGGCGGTGTAGCTGATCTCGACTATGTGGATCAGCTGGTCCTCGAACAGAACTAGC
GCTCCGTACATGATCACGCCACCTTGATATATAGATATTCCAGTCCAAATATAGAACGTT
TTGTAGGATAGCTGGCGTCCTCTCGTCAGCTGTTTGTAGAGCTGCGGGTAGCGAAGCACC
GTCGAACTGGATATATCTTTATCGAGCACCAATGAAAAGACAGGCAGCATCGTGAATAGA
GTACCGTAACCGACCATCAGGAAGCCGGGGTACAGCGAAACCGACGAGAAGTAGAACACC
ACTGAGAACACCGCCTGCATAGTGGAAACGATGAGTCCCCGATGCACTATGAAGAGGCAG
AGCGCCGCCGAGCGCATGACGGAGCGGCGGCCGTGCACCAGGAACAGGCGCGCCAGGTTC
GAGAGCTGGCGGACGCTGACGTCACCGGCCAGCGACGCCGCGCGACCCTCCGCTCCCTCT
ATACCGACGCCTGGTACAAACGTTATAAGTCTTAGGTTATTAACAACCTCCACTGCTTTG
TCAGCTATGACATCAAGCAGAAACTATGATATTCCTGTACTTAAACAAAAGTGCACGATG
TATTAGAGCAGTTCTCTAAAGGTTATTTTTGTAAATATTTGTGATCTAGATTTCGGCAAC
CCTAACAAAATAATGTTCAAAATTGTATTAATGATGTTTATCGAGCACGCGATGTAATAT
ATATAATCATCAGCTGATCCTCGGAAACCAAATTCCCGAGAATTATGATGATGAGCGATG
ATGACATCTATCGCAAATGATATAAACACGGAATATGCCTGAGTCTCAATAAAAATAACA
TTTAGTAGAATTTCTTTACAAATAGAAAGCATTCTAGTAGCATTTAGAACACCCGAGAAG
TACAACGCCATCTAT
(1935 bp)

- SilkBase 1999-2023 -