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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp66834_c0_seq1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		PREDICTED:_zinc_finger_homeobox_protein_3_[Amyelois_transitella]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001046 F core promoter sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005667 C transcription regulator complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0007050 P regulation of cell cycle
GO:0007420 P brain development
GO:0007517 P muscle organ development
GO:0008270 F zinc ion binding
GO:0016604 C nuclear body
GO:0019899 F enzyme binding
GO:0032922 P circadian regulation of gene expression
GO:0043231 C intracellular membrane-bounded organelle
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045662 P negative regulation of myoblast differentiation
GO:0045663 P positive regulation of myoblast differentiation
GO:0045664 P regulation of neuron differentiation
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0071559 P response to transforming growth factor beta
GO:1904059 P regulation of locomotor rhythm
Transcript
Level		FPKM:3.42 TPM:5.97
ORF EntryO_BomoEE13267_complete:A_BomoEE_comp66834_c0_seq1
Sequence
(Nucleotide)
GTGCGGTGCTGCGCCTGCGACTACTACACTAATTCGGCCCACAAACTGCAACTCCACGCA
GCAGGAGCTCGACACGAAGCCGCTGCTCTATTGTTGAGACATCTTCGGGAGTGCGCTTCG
AGGATGCCACGGGAACGACCTCGCGTCTACCGCTGTGCTCTATGCGGCTTCAACGCTCCG
CATCGACTTCCGCTGTTACAGCACGTGCGTTCGGTAAAACATCTACAGATGGAACAAATC
CATCAGCTCCAACGACGCTCCGAAGGGAAAGACCCGACGCCTGACGTCGCTGAACTTTTC
CAAGTCATACCTCAGCCCCAGGAGTTGTCCTATGAACAACAGGACAATGACACCAAAGAG
CCTATTGATCAGAAACCAGAACTGACCCAAGAACAGAAAATGTTGCGATTTCTCGAACAT
CACCATCAACAGCAGCAACAACAGCAACTTCAAACACAACAACAAAATCAACAAGCCTCA
AATGACAGAGACGAAGAAAGGGAAACTCCAGGACCTCACGCGTGTCCTTACTGTAATTAC
AGTTGCCCGAGTGAAGCTCGTCTACACGCTCATGTCACTTCCGTGCACGCTGACACTGCA
CGTCATTTTATTTGTCCTTTATGTCAAGATGCCTTCAAGGATCGACCTGCCCTAGAACGA
CATGTAATGCAAATTCATTCAGTCAATTCAGAAGGCTTACAGAGGCTACTGCTTTTAGTA
GATCAAAGTCATTGGCTAAATGGTGGCACCCAGCAAAGGGATGAATCTCGACAGGGTGAC
GAAGATAGAGAAATATCATCTCCACGCTCAGAGGGTAGTGCTGATGGAGAGATGGAACGG
TGCTCGACATGCAGCCGAACATTTAGAAATGTAGATGAATTATGTCAGCACCAAAATGAA
ACAGGACATTTAGAACTCAAGCAAACGCCTCAAGGGCCGGGCTACGTGTGCTGGAAGAAA
GGATGCAATCGTTACTTTGATGCAGCCCACGCCTTGCAGAATCATTTTCGGGAAGCTCAC
GCACGAAACTCGATCGCTAACATGTCAGTATCAGAGAAACATGTTTACAAGTATCGTTGT
AACCAATGCAGCTTGGCGTTTAAAACAGTGGAGAAACTACAACTGCATTCACAATATCAT
GTCATCAGAGATGCGACAAAGTGTGTGCTGTGCGGCAGAAGTTTTCGATCTGTACTCGCT
CTTCAGAAGCACGTCGAAACTTCACATCCGGAACTATCCGAGGATGAGCTCACTGCTTTT
AAACGTAGCTTAGCATCGAATCCATTGATGCAGGCCGGACAAGGCACCGCTCTCGATGCT
GCTACTGCAGAGCTTCTCCGTAAAGAAGCCCTAAGAACACCAGACGACGATTTAGCTGAT
ATGGAGGATAGAGATTCAAGTGCGACTGTGGCCGATGAATCCGGTCACAACGACGCTGAA
AACTCTGATGATTCAATAATTTACAAAGATCAACAATTTTTGGAAGACTACCTAAACTCG
CAAGCCATGGCTGAAGATTCATATAATGACCCGAACAGGAAATATAAGTGTCACCGATGC
AAAGTGGCATTCACACGTCAGTCATATTTGACAGCTCACAACAAAACCTTACTGCACAGA
AAAGGTGAAAAATTAACTTATCCAATGGAAAAATACCTTGATCCAAACAGACCTTTTAAA
TGCGATGTATGCAAAGAATCGTTTACTCAAAAGAATATCTTATTGGTACACTACAACAGC
GTGAGCCATCTACATAAACTCAAACGGGCCATGCAAGAACAACAGAATAATAATAATCCT
CCCGTATCGCCTGGAGCGGGTTCGGCGCCCTCTAATCTAACATTAACTCCCAAAAGTACT
TCGAGTGAAGAAGACGATCGTAAACGTTACAAATGTAACATTTGCAAAGTAGCATATACT
CAAGGCAGTAATCTCGACATACATATGAGATCAGTCTTACATCAGACAAGGGCTGGCAAG
TTGCAAGAATTAGCCGCAACTGGACAAGTCGACTTGACACGACCATTAGTAGAGCAACCA
GATAGAAAGGACCCCGCTAAAATTTTACAAGACGTGCTGTCGCCAAAAAATACATCCCCT
TCGTCTACGAGCAGTGGGGGACCGCGATCTTCACCCCCCGCCCGGCCAGGTAGCCCTCGT
TCCCCTCGCGCAGGTAACGCCGCGTGCGATCGGTGCCACGCGTCATTCCCGACTGCGGAG
TTACTCGACGCACATCGTGCGTCTTCATGCCCGTTTAGCGATGCGCGGGCGCATTCGCCG
TTAGGTGAGGCAGAAGCTGCGGCATTGGACGAAATGGTCGCAAAGGGCAATCCGCCCAAA
CGTAACTCGCAAATGTACAAACAACTCTTAGAAACCTTCGGATTCGACCTCGTCATGCAA
TACAATGAGAACCAGCGACGAAAGCTACAAGAGGAACGTGAAATCGCACGCGCGCCAAGT
CCGCCGCCACCGCCACCTGAAGAAAAGCCGCCGGACGGTGAAAATAAATCGACATGTCAA
CATTGTAATAAAGAGTTTTCTAGTGTATTCGTTTTAAAAACACATTGTGAAGAAGTGCAC
AAGGATAAAGTGCCATTGGAGTTTTTGGAACAGTTCGCGGAACAATTTAAGTCGGAATAT
GAAAGAAAATCAGGTGCGCCAAACTCGCCGCGTGCTGCGTCTCCAGCACCGCAAGGTGAG
AGGTCGCCGTCGCCGCGGGGTGACAGTAGTGCGAATTACAACGAGAACGGAAATGCGGCT
GGTGAAGCGCAGGCCGGTGCGTTGCTAGCTGCTCAAGTGCAAGAGATGCAAGCAGCGCTG
AACATGATCCAGTTACAACAGCAGCTGGGCACGATACATCCGATGGTCGCACAAATGCTA
TCTCTGGGATTGCCACTAGGATTGAATGTCGGGGCATTGGCTGCAATGAACCTGCAACCA
CCTCTGGTACCAATAATGATGCCACCTCCGCCCTTTGACGCGATGTCCTTCGCACACGAC
GCCCAACTCAAACAACAACAACTGATCCAGCAACAACAGCAGGCAAATGCTGCGGCTGGA
CAGAAGCGAGCCCGCACTCGTATCACAGACGAACAACTCAAGATTTTACGAGCACATTTC
GACATAAATAACTCACCAAGCGATGAGGCCATCGCTAAAATGGCCCAACAATCTGGACTT
GCCACTAAGGTAATCAAACACTGGTTCAGAAATACATTATTCAAAGAACGACAACGTAAT
AAAGATTCACCGTACAACTTCAATAATCCACCATCTACTACGTTAAATCTTGAAGAGTAC
GAGAAAACTGGCGAAGCAAAAGTTACTCCTCTTGATTCGTCTGCCAGCTCGGATGAAGGC
AAACCGCCGCCTGAAAAAAAAGCAAAATATGAAGAAAATAACTCTATAAATCATCAGGAA
GTAAAATCTGAACCTTGTGATGAACCTACAATGGAAGAAAAATTTAATTCATATGATGAT
CGGCATCAAGAGGATAAAAGTTTTGTTTTTCCTCAAGCACCTTCTCAAAGCCCAGCTCCG
ATAAGCCATCCTGATAATCATCATAATATTTCTCAACCATCGTCTCCAACACATATATCG
TTGAATTCATTAATTCAATCGCAACTTGATTCAATACCAGCAACGAGTATACCGCAGCCA
CCACATCCGTCAATGTTGCCACCTAAGTTAAATCCAAATTTCACGTCCCCAAACTCCGCG
CCCCCGAACGTCCTACCTTTGACCCCAAATCGCAGTCTGAGCCCCGGCAGGGGTCCAGCC
GATTTCGGACTTTCCGGGGGCAACTCGAACGGATCCAACAGCTCGGGGTCTTCTGGCAAA
CGCGCCAACAGAACTAGATTCACTGATTACCAGATAAAAGTTCTTCAAGAATTTTTTGAA
AATAATGCATATCCCAAAGACGATGATTTAGAATATCTTTCTAAGTTGTTAGGACTGAGT
CCGAGGGTCATTGTTGTTTGGTTTCAAAATGCTCGTCAAAAAGCAAGAAAAGTATACGAG
AATCAACCTGCAGCGGATCCGCCGGCAGGAGCAACAGATGATGCTAATAGATTTCAGCGC
ACTCCCGGTCTTAACTATCAATGTAAAAAGTGCCAACTAGTGTTTCAACGATACTACGAA
CTAATAAGACATCAGAAAACGCATTGTTTTAAAGAAGAAGACGCCAAACGATCAGCGCAA
GCTCAGGCTGCTGCAGCACAAGTAGCTGCAACATTGAGTAGTGAAGACTCCAATTCAAGC
ACCGTAGAACATCATAATCCTCTTGTACCAGTTTCACCTGCACCCCCTCGAACTCCCACT
CCAGCTGCGCCTAATTACCCTGTATCTCCAGCGCCACCAACTACTTTAACTCCTGTAACT
CAGTTACCACATCAAACTAGAGAAGAAAAAGATGGAAATTTTCAATGTGATAAATGCAAC
CTGGTCTTCCCTCGATTCGATTTATGGCGAGAACATCAACTGGTTCACATAATGAACCCA
AATTTATTTCCTACTTATCCGCCAGACTCCCCTTTTGGGATCTTACAACAACATGCTCAA
CTTCAACAGTTAAATGCTTCGTTAAGCAATGAGGAGGCACGACACCCTTTAGTCGCAGCA
CTAAATCAACAAGTAGTGAAAAGAAAATTTGATGAATTTGAGGAAACAGATACTGGAGAG
CAACCAAAAGACAAAAGATTAAGAACTACCATCTTGCCAGAACAGCTTGACTATCTCTAT
CAAAAATATCAAATTGAATCAAATCCTTCAAGGAAAATGCTTGAAAATATTGCACGTGAA
GTGGGTTTAAAAAAAAGAGTGGTACAGGTCTGGTTTCAAAACACCAGAGCCCGGGAAAGA
AAAGGGCAATTCCGGGCTCATGCCCAAGTTATAAATAAAAGATGTCCATTTTGTCCAGCT
TTGTTTAAAGTGAAAAGCGCGTTAGAAAGCCATTTAAGTACGAAGCATGCTGATCAGTGC
ACACGAGGCGAAATTAACGTAGACGCACTACCAGACGAAGAACTTAGTACGGAGTCCACG
CCAAGTTTTGGTTCTCAACAAAGTGACAGGCAGCAAAATTTTTCCCAAGCGGGGGCTCCC
ATGTTGCCCCCTATTTTCCCGCCTTTTCATTCAGACATGGAGAAATTTATCAAACAGTAC
AGTGAAGAATCGATGAAACGTTACGTGAGCGAATTACAAGCTCATGCCGCTGCCCAACAG
AACGGTGGAAGCAACGACTCCTCCGATAGACGCCCAGAACATGGAAAATCAGAGATCCCT
TTAGATCTCAGTAAGCCTGTGGATTTATCACGACCTGGGTCCGACGCAGATGAGCGTTCA
GATACTGCCTCCGAAACAATGGAATTCTATGAAGAAGACGAACCCTCATCGCCTATCATG
GCCGGTCAACCACAAACACCTCGTCCACCCGGTAAACGATATCGTACTCAGATGTCATCC
TTACAAGTGAAAATCATGAAGTCACTGTTCACGGATTACAAAACGCCGACGATGGCCGAG
TGTGAGGCGTTAGGTCGCGAAATAGGCTTACCAAAACGAGTGGTACAAGTTTGGTTTCAA
AACGCACGTGCCAAAGAAAAAAAGGCGCGCCTAGCTGCTGGATTGGCGGAAGTATCTGAT
GCACCTCCCCCGGAAGAATGTCGCGTGTGTGATTTTAAATATAGCCACAAGTATTCGGTT
CAAGATCACGTGTTTACACGGGGTCACATCGCGGCGGTACGAGCGCGATTGGAAAGCGGC
GCCAGTGTCGGTGACGACAGCACGTTCGCACTGATGCAAATGGCAGCGCGTCTTGACAGC
GGCATGGGCGGAGAGCTTCACAACGCGTTCCTGCGGCCGCAACTCGCCGGCAACGGTGAG
TGCACCACTTGACCAGGGTCTGACTCGTATAGCGTGCCAGAACACTGTACGACTCAGGGT
CTAATGTAGTAGAACCTCGTAGCGGCGAGTTTCGCTCGACCGTAGCATTTCAAGTAGTAG
CAACTTCGCAGCATTGAACCCGGTTCGAGCGAAGCTCCTTTGGTGTCGTGACGGTCGTTG
CTATTTTCCTATTAGTGAGTTCTTTCTGTAAATAATCTGTCATTGTCAAGAATTTATTTA
TATCTTACTTTATGTTGGTTTTTTAATGAAATAATTTAAAAAAAGTTGTCTTCCAAAACC
AAAAAATAACATACAAACTACGTCAAAACTATTGATTTCAAATTTAGTAATCGCTAATGG
CGGCACGTAGGAACTCGATTCAATCTCAGAAATTGCTTCGTAATTTCAATAATTATTAGA
ATGAGCATTCGAAACGGGGCAGCGTTGCACGACACAACGCCAATCTGACGGTTGCATCCA
TGTTGTGACAGTTTACGATTGTATTGTTTTTATTTCGAATTATGACAGTTGTTTGTTGGT
ATTTATGAGGCGAGAGTGATAGACAAGTATTAGGTGGATGAAATGGTGCGTTCGCGTTGT
CATCGAGTCGCTAGAGGCGGGCCGAGCCGGGCCGGTGGGAGGTTCGCTCTTACCCGCCAC
TATTCAAATGCAAACGAAACACAACAATGGTAGGAGTTAGGACGCGTGAAGGACGTCGTA
TATCTGACGCGACCGATCCGACTCACATGCATTCCGCTCTACATGAATAATCAATTATTT
AAATCGTCGCAATCAACAGTCTTTCATTCGAGTGACGGGATAACTTTAATTGTTTCTTCG
ATTAAAACTGTAAATAAAAAAGGGAATTTTATTAACAAACCAACATAACGTAGTGATGAT
ACATATATAGACTAGTAATCTGTTGCATAATATTATTCTTCCTAGTTGTTTATATTTAAA
AACTCCTATTAGGTATTAGCGTTTTTTTTCGATTGTTGTAGAATTTTAATGAAAACCAAA
TTATATATCTTAGAGAATTTAACATTTTAGTTATATTTTAAATGTAAAGTCATAGAAAAG
CCTGAAGTTTAACTATTAAATAAGGTGCCTTGTAGGATTCGAGTGTTTTGTAAATTATTA
TTTGTGCTCCACTGTAAATATTTATATGTAAAAGTATACTACTAGTTTGGTAACGTTATT
GATAGGTACTGCACTGTAAAATGTTCGCTTGCAGATAGTTGATGTGTAATTAGATAGTAC
GACCTAAGCAAAGGTATAATAAATATATTGTTTACGTGTAGAGGCATCTTAAGAATTTGT
GATATAACTTGTATCTAATTAGCTTAGGTACTTCGTATGTTTTACGATTGCCTCCGACAA
AGGAGCGATGCTAGCAGTATCAAAATAAATACAGGCATAACGTTTACAAGTCTGTGCACT
TAACATAATAATGAAGTCTTTATTGTCGCGCGGGGTCGCGCCGGCTGCAGTTTTTTGCCA
TTCATCAGACATTTACATAAGTGAGCCGTTATTGGGGAGTTAGGTGATATGCAAATATTT
TCTTGAATACCGAATGTCGGCTGTGTAGGCTTGCTCGTGGTGCGCGCATGCAAGTCGTCG
CACGCGCCGTGGGTGTCGCCATTATTCCTTTATTTATCCCTTCTATTCTTTATGTGAAAG
TTTGTTTCCCGTCACCTTCAGCCACCGCGATACACGTCTTATTGATCTTTCATATGCAAA
TGTCAAAATTCAGAACGCCGAACATAATATTATGCTCATAGTTTCATTTACGTTCCAACG
AATAAGCGCATAGCAGCCGATTTTGAATATTAAAATGTTTATTTGCATATAGCCTTTTTT
CTGTTTGTAATTTTTTTTTTTGTATATTATTATTTTGTTTTTTTATGTTATGTTTGTATT
TATTTTTGTCCTTTAGTTTTACTTTTATTATTTTGTTTTGTCATATAGATACATATAAAA
TTGCACGTTCGTGCTGTGTAAAATGTGCGATTGATATTGAATTAGCCTCCACTACGACTT
CCATTTTAATTTAATTGTATAATTTAATTTTAATGTAATTATCTGCGATCTGCATTTACT
GTTATAGAGGTGATTATTGCTAAATAGTTAACGAAACAAAGCCCTGTGCCAGCCAGTGAT
TGATTTTTGTGTTTAGACGTACAAATGCGTCTTTTAGTAATCAAGTATAATTCTTGTAAA
CTGAATAGTATTATTATTATTATCTACAGTTATTTTATTTGCAGAATTCGTTGAAATAAA
TGCAATATTTATATTATTGAAAAAAAA
(8187 bp)

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