SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp66545_c0_seq1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_7-like_isoform_X1_[Papilio_xuthus]
Ontology
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006342 P heterochromatin assembly
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0035328 C heterochromatin
GO:0036459 F thiol-dependent deubiquitinase
GO:0043234 C protein-containing complex
Transcript
Level		FPKM:2.26 TPM:3.95
ORF EntryO_BomoEE12960_5prime_partial:A_BomoEE_comp66545_c0_seq1
Sequence
(Nucleotide)
GACTATACATTAGACACTGTATAGACATGATACTAAGACTATGCAAAAATAATAAAAATC
TTACCCCCTCCGCGTCGTCCCTTAAGGAACTTCGTTCCAAAATTAATATTCTAGAATATT
CTGTGGATATTATCAAAATCCGTAATTCAAAACATAGGTTCGAATTCTACGAAGAGATAA
ACTTGGATCCGTATTTACAAGAGGTACCGTCCACTCCCTCGCATTACACGCTTCACGCTG
TGCTCGTTCACTCGGGCGACAACCACGGAGGACACTACGTCGTCTTTATCAACCCTAAGG
GCGACGGAAAGAACTACACAATTGAAATACGTTTTACAAGACGCTTCCGAATCCGACATA
CCGCCAGATCTCTGTGATCGAATCAACGAAGAAATGCGATACGAGATGGCGGCGGAAAAA
TAAAGTGCAAGAAATTTAAATCGGACACGTCTGTCTCGTCCGCAAAACGCTACACCAAGA
TATTTAGCGCATTAAAACATTTCTTCACTTTACAGGCGGTTGGCGGATCTAAATACAAAG
GAAGATAATAATACTAACAAATAAGACGCGTTCTGTGTTTCATGTGTAATTTTTGTTGGT
GTAATGTATTTTTGGATGAGCCGTTAGCATTAAAATTTGTCAAGTAGATTAATAGTTAAG
GTTTTGTAACGGAATTTTGGGTTTGTATAGGTATATATTTATTTTACTGTAATAATTTAT
TTTAAACAATAAAATTTTTGGCGAAACGTAAA
(752 bp)

- SilkBase 1999-2023 -