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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp66471_c0_seq2
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		PREDICTED:_irregular_chiasm_C-roughest_protein-like_[Bombyx_mori]
Ontology
GO:0001745 P compound eye morphogenesis
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005913 C adherens junction
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007409 P axonogenesis
GO:0007520 P myoblast fusion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016202 P regulation of striated muscle tissue development
GO:0030165 F PDZ domain binding
GO:0042802 F identical protein binding
GO:0045177 C apical part of cell
GO:0046331 P lateral inhibition
GO:0046666 P retinal cell programmed cell death
GO:0046667 P compound eye retinal cell programmed cell death
GO:0048749 P compound eye development
Transcript
Level		FPKM:0.09 TPM:0.16
ORF EntryO_BomoEE12903_complete:A_BomoEE_comp66471_c0_seq2
Sequence
(Nucleotide)
TCAAGGCTATCAGGTTAGGTAGAGAAAAAAATTAGAATCATTCAATTGTTTATCGTTATG
AGTAAAGTGTGGATTTCCGACTGTTTCCTCGTGTCAGTGTACTGAAATAGCAAGCCTGTT
ACTAGCCTGAGGCTGAGCTCCACTGTTTGTCGATGACGACGAAGCTGGAGGGCTGGTGAC
CGGTCGGGACGACGATGATGAAGGAGTCGTTACCGGCGGAACTGACGGATGACACCCCTG
ACGTATTGTATAGTACGGTGGTGGAGTTGGTTTTCCAGTCGATAGCGAAGCACTTTGAGA
GCCGTATGGCGAAGATCCGCCACTTCTTAGATAAGGATTTCCATATGCAGCAGAGTACCT
CACGTCAAGGCCTGACAGGACGACTCCGGGATTCGTGAACGGTATCACATCAGGTCCGAC
GAGACCACCCAGTCTTCCACAGCTAGCTTGCCGCCTTAAGGACCCATAATGACCAGGGTA
CGAAGACCCGTCAGTGCTTCTGGTCAGCGAACTGGACAGCGATTCCGATGGCACTGGCGG
GGCGTAGTCCCTTGAGTAATCCACGTAGGGAACGTAGCCGTTGCTTTGAGGGTGCGACTT
AAAATGCAAACTGTTCACTTGCTGATTGAAGTCTCCGCTGTATCTCTGGTACTTCATAAG
CTCGTCGTCAAAGCCGGTCTCCGGTAGGGGAACCGGCCCAGCTAGTGGCAATCCAAGGTT
CGTTGTTATATGTAATGTAGGATGTAGATCTGCTTCGGTGTTTGAGTGGTCCATATCACA
GTTCCCTTCGATTTGTCTCAATTCCAATTTGAGATCACTTATGTTCGAATGCCGATCGCT
CTCTTTATAGCTTCCACAGTTCTTCTCTATATCGGTTATATGTGGTTTTTTTACATCAGC
CTTTTTAGTTTTATTATGGAATAACATTATTACAAACATTATAATGAGGATAAATATTAT
AGCCGACGAACCTCCTATTAACGATATCAGCATTGGGAATGTTTTTTCAGCTATTAAATG
AATTTCGGCGCTATCCGTCCCATAGGAGTTTATAACCGTACAATTGTAGGGGCCAAAATG
CTCCGATTCGCTCTTGCGGATAATCAAAGTGGACTTCGTCATCTTGTCCGCTAAAGACTC
TTCTAGAAAAGCGTATTCTTGGTTATGGAAACTGGTTATCTCGTGGCCTCCAAAAGTCCA
CATCACGAAATCAGGTCTTGGTACTGAAAACGAGATACATTCGATTCGGACTGTGTCTCC
TTCGATCCCGTACTGAGTTAGATTTGACATAATCTTCGGTGGACCTTTAATATAAACAAC
GGCTGGTGCTTCCACTTCTGGTCTTCCTTCGACCACGCCCCTGCACCAATAATGTCCGGC
TGTCTGATGGGTTACCGTCACATTCAGGGTTTGTGTTTTACCCACTCTAATGAACCGGTC
GCCGTCATATCTGAGCCACATGATCTTTGGTGTTGGGTGACCTTCTACAGCGCAATCCAA
TGTTACTGTGGACCCAGAGTCTGCTTCCACGCTCTGCGGCTTCATTTTGAAGGTCGGTCC
ATAGATCACTTCTAAGGTTTTCGTATCGGCGCTATTGCCAACCTTATTGTGCACTTCGCA
TTTGACAGACGCTTCGTTAAGCTTACGAGAAACGTTTGTTATAATCAATTCATTTTTCAC
TTCTCCAATTGCTTCATCATTGTTTATGTACCATTTGTAAGATACATTACTAGGGTTGGC
ATTCGATTGGCACCCTATTATTAATGTTTCCCCTTCTTGTATTCTCCCTTTTATTGACCC
GGATTTCATGAAGAGACGGACCTTAGGCGCGTATTGGACTTGTAATTTGACGTTGACAGA
TCTATACGCCCTGTCTGCAGTGTTCTGCGCTTGGCAAGTAAAAGTCTGATTGTGGTGTTG
GCGTCTGGGACGTATTCTGAGGGTAGACCTCGCCGTAAATCTTCTGCCATCACCCATCGG
TTCCACGGTATAAGTGACACCTTGAGTCAAAACTCCACCGTCATTGTCGACCCACGTTAT
CTCCGCTGGAGGTTTTCCTCCTACTGAAACACACTCCAAATCCAGCTCTCTGTCTTCTAT
AGCTGGAATGACGGGCCCCCGAAGTATCTTTGGAGGATCTGGTGGTACCAGCACCGTCAG
TCGGGCGTACCTTGACCGAATTGCTGGCTCACCCCTCGGTCCAGAGCTAACTTGGCATTG
ATATGCTGCGTCGTCATCCAGCGTAACTTCTCTGATGTCCAACGAGTAGTCGCCTTCTTC
GTCGCTGCCAATCATTTTGTAGCGCTCGTATCCGGCCAGATGGCGGTGTGTACCGAGTCC
AAAGTCATCCTTAGTCCACTGAAGTTGCCCAGCCTTCTCCTCAACTCTGCACGGAAGGAT
CACTCTGGAACCTAATATGGCGGTCTGATCTTGAGGTTCTAGCGCGAACCGTTGCTCCCC
AAACGCACTGACACTGGCACTGACACTAACAAAAAAGATAAACAACATCCATTGCTTCAC
TAAAACTGACATAAAGCCCGATATCCTCAACAAAAGGAACAATGTATTGCAGCATCTGCT
CGTCAATCGTTTATTACACGCTTTCGTAATAAAACACATTTTGTTTATAGAATGTTCTAG
ATTACAATTTACGTCAAGTTTTGTTTGAATTTTGAAATCACCATCCGAATTTCCATTCGT
CGTCCATCTTGAATATTCACAACACATTTTATTGCAAATCTTCTCTACTCTGTCCTTTAC
CGAACAATAAAATCCAAAAAACAACACTAACACTCTTATATATTTTTCGTATAATTAACT
TAATAATCCGCGATGTTTTATTTTTCGTGAAATTGGTTTTACAAAAGACACGTCTGCCGC
GTACTAAGCCCGTAAG
(2896 bp)

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