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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp66471_c0_seq1
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		Irregular_chiasm_C-roughest_protein_[Papilio_xuthus]
Ontology
GO:0001745 P compound eye morphogenesis
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005913 C adherens junction
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007409 P axonogenesis
GO:0007520 P myoblast fusion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016202 P regulation of striated muscle tissue development
GO:0030165 F PDZ domain binding
GO:0042802 F identical protein binding
GO:0045177 C apical part of cell
GO:0046331 P lateral inhibition
GO:0046666 P retinal cell programmed cell death
GO:0046667 P compound eye retinal cell programmed cell death
GO:0048749 P compound eye development
Transcript
Level		FPKM:0.41 TPM:0.71
ORF EntryO_BomoEE12902_complete:A_BomoEE_comp66471_c0_seq1
Sequence
(Nucleotide)
GACCAAACCAGTCTCTTTGAGTACGTTTTAATGTAATTAATTATATAAAACGAAATGAGC
TTTATGCTAAAATTACTTAGTGTCTACACGTGCGCGGCTAGATGGCTTCCATTACCTTTG
GTTCCATGTTTGGTTTGTATCTTTCCCTGATTGGACGGCTGTAGGATATATTGGGCTGAA
TTTTGTGAGCACGGCTTTGGCATCTGAGGCTGAGCTCCACTGTTTGTCGATGACGACGAA
GCTGGAGGGCTGGTGACCGGTCGGGACGACGATGATGAAGGAGTCGTTACCGGCGGAACT
GACGGATGACACCCCTGACGTATTGTATAGTACGGTGGTGGAGTTGGTTTTCCAGTCGAT
AGCGAAGCACTTTGAGAGCCGTATGGCGAAGATCCGCCACTTCTTAGATAAGGATTTCCA
TATGCAGCAGAGTACCTCACGTCAAGGCCTGACAGGACGACTCCGGGATTCGTGAACGGT
ATCACATCAGGTCCGACGAGACCACCCAGTCTTCCACAGCTAGCTTGCCGCCTTAAGGAC
CCATAATGACCAGGGTACGAAGACCCGTCAGTGCTTCTGGTCAGCGAACTGGACAGCGAT
TCCGATGGCACTGGCGGGGCGTAGTCCCTTGAGTAATCCACGTAGGGAACGTAGCCGTTG
CTTTGAGGGTGCGACTTAAAATGCAAACTGTTCACTTGCTGATTGAAGTCTCCGCTGTAT
CTCTGGTACTTCATAAGCTCGTCGTCAAAGCCGGTCTCCGGTAGGGGAACCGGCCCAGCT
AGTGGCAATCCAAGGTTCGTTGTTATATGTAATGTAGGATGTAGATCTGCTTCGGTGTTT
GAGTGGTCCATATCACAGTTCCCTTCGATTTGTCTCAATTCCAATTTGAGATCACTTATG
TTCGAATGCCGATCGCTCTCTTTATAGCTTCCACAGTTCTTCTCTATATCGGTTATATGT
GGTTTTTTTACATCAGCCTTTTTAGTTTTATTATGGAATAACATTATTACAAACATTATA
ATGAGGATAAATATTATAGCCGACGAACCTCCTATTAACGATATCAGCATTGGGAATGTT
TTTTCAGCTATTAAATGAATTTCGGCGCTATCCGTCCCATAGGAGTTTATAACCGTACAA
TTGTAGGGGCCAAAATGCTCCGATTCGCTCTTGCGGATAATCAAAGTGGACTTCGTCATC
TTGTCCGCTAAAGACTCTTCTAGAAAAGCGTATTCTTGGTTATGGAAACTGGTTATCTCG
TGGCCTCCAAAAGTCCACATCACGAAATCAGGTCTTGGTACTGAAAACGAGATACATTCG
ATTCGGACTGTGTCTCCTTCGATCCCGTACTGAGTTAGATTTGACATAATCTTCGGTGGA
CCTTTAATATAAACAACGGCTGGTGCTTCCACTTCTGGTCTTCCTTCGACCACGCCCCTG
CACCAATAATGTCCGGCTGTCTGATGGGTTACCGTCACATTCAGGGTTTGTGTTTTACCC
ACTCTAATGAACCGGTCGCCGTCATATCTGAGCCACATGATCTTTGGTGTTGGGTGACCT
TCTACAGCGCAATCCAATGTTACTGTGGACCCAGAGTCTGCTTCCACGCTCTGCGGCTTC
ATTTTGAAGGTCGGTCCATAGATCACTTCTAAGGTTTTCGTATCGGCGCTATTGCCAACC
TTATTGTGCACTTCGCATTTGACAGACGCTTCGTTAAGCTTACGAGAAACGTTTGTTATA
ATCAATTCATTTTTCACTTCTCCAATTGCTTCATCATTGTTTATGTACCATTTGTAAGAT
ACATTACTAGGGTTGGCATTCGATTGGCACCCTATTATTAATGTTTCCCCTTCTTGTATT
CTCCCTTTTATTGACCCGGATTTCATGAAGAGACGGACCTTAGGCGCGTATTGGACTTGT
AATTTGACGTTGACAGATCTATACGCCCTGTCTGCAGTGTTCTGCGCTTGGCAAGTAAAA
GTCTGATTGTGGTGTTGGCGTCTGGGACGTATTCTGAGGGTAGACCTCGCCGTAAATCTT
CTGCCATCACCCATCGGTTCCACGGTATAAGTGACACCTTGAGTCAAAACTCCACCGTCA
TTGTCGACCCACGTTATCTCCGCTGGAGGTTTTCCTCCTACTGAAACACACTCCAAATCC
AGCTCTCTGTCTTCTATAGCTGGAATGACGGGCCCCCGAAGTATCTTTGGAGGATCTGGT
GGTACCAGCACCGTCAGTCGGGCGTACCTTGACCGAATTGCTGGCTCACCCCTCGGTCCA
GAGCTAACTTGGCATTGATATGCTGCGTCGTCATCCAGCGTAACTTCTCTGATGTCCAAC
GAGTAGTCGCCTTCTTCGTCGCTGCCAATCATTTTGTAGCGCTCGTATCCGGCCAGATGG
CGGTGTGTACCGAGTCCAAAGTCATCCTTAGTCCACTGAAGTTGCCCAGCCTTCTCCTCA
ACTCTGCACGGAAGGATCACTCTGGAACCTAATATGGCGGTCTGATCTTGAGGTTCTAGC
GCGAACCGTTGCTCCCCAAACGCACTGACACTGGCACTGACACTAACAAAAAAGATAAAC
AACATCCATTGCTTCACTAAAACTGACATAAAGCCCGATATCCTCAACAAAAGGAACAAT
GTATTGCAGCATCTGCTCGTCAATCGTTTATTACACGCTTTCGTAATAAAACACATTTTG
TTTATAGAATGTTCTAGATTACAATTTACGTCAAGTTTTGTTTGAATTTTGAAATCACCA
TCCGAATTTCCATTCGTCGTCCATCTTGAATATTCACAACACATTTTATTGCAAATCTTC
TCTACTCTGTCCTTTACCGAACAATAAAATCCAAAAAACAACACTAACACTCTTATATAT
TTTTCGTATAATTAACTTAATAATCCGCGATGTTTTATTTTTCGTGAAATTGGTTTTACA
AAAGACACGTCTGCCGCGTACTAAGCCCGTAAG
(2973 bp)

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