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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp66413_c0_seq3
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_43_isoform_X2_[Bombyx_mori]
Ontology
GO:0005654 C nucleoplasm
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0019785 F ISG15-specific protease activity
GO:0019985 P translesion synthesis
GO:0036459 F thiol-dependent deubiquitinase
Transcript
Level		FPKM:6.37 TPM:11.11
ORF EntryO_BomoEE12829_complete:A_BomoEE_comp66413_c0_seq3
Sequence
(Nucleotide)
GTATACGTCAACGACATATCAATGTTTTCCACTAAGTTTCTTTTTCCAATAGCTTTTTTG
CTGGTTTGATTTCCAAATAAACTACTATGTCTATTAATAATTTATCATCTGTTCTCAAAT
CTTGTTCAGAAAGTGAACTTATAAATGAAACATCGGAAACTAGCATGACACAGAAGCAAG
TGGAAGGATCCCGATTGAAGCGTACTTTTACTTTACCCAGGAATCCCTTTGGGAACTCAA
AGCCTGGTTCAAGTAAAAGTAAAAGTGGCGATGGAGACAACAAATCCATAAATTCTAGTT
CTGTGATAAGTGATACACAAAAGGACGAGGGCAGCTTAGATAGGAAGTTGTTCAGAAGGC
CTTCATGGAAAAGGTTTCTAAATAAGATAGCTCTACATATGAGTACAGTACGTGTAGCGG
GTGGCAAACCGGCTCCAGTTTTAGTTAATGGAGAGAAGACGAATTGTAATGGTGAGCCTC
CGTGGCCGCCTGGGAACACTCCAGCTGCGACAGGGATAAAGAACCACGGAAACACTTGTT
ACATGAATGCTGTCCTGCAGTGCCTTTCTCATACAGATGTTATTGCTGAATATTTTGTGT
TGGACCATTATAAGGTTGATCTTCAAAAGCGAAATAAAATTAATTCAAAGAAATATGGAA
CAAGAGGAGAAGTTACTGAGCAGTTGGCATCATTGTTGAAATCATTATGGGCTTGTCACT
ACACACCAGATATGAGCACAACCTTTAAGAAAACTGTGGAAAGACATGGCACGCAATATA
GAGGTAACAGTCAACATGATGCGCAAGAATTTTTATTTTGGCTTCTTGATAAAGTGCATG
AGGATTTAAATACCGCTACAAAAAGAAAATATAAAACAATAAAGAATACTTGTGGGAAGC
CAGATGAGGTAGTCGCAGCAGAAACATTAGCAAATCATGCTAGAAGAAATAGCTCATTTG
TGCAGACAGTTTTTCAAGCACAATATAGATCGGCCCTAACGTGTGCAAAATGTGAAAGAA
CATCTTGCACCTTTGACCCCTTCCATTGTGTGAGTGTGCAGCTACCATCAAGATTAGCAA
CTGCACAACCGTCTCCCCTACCTGTCAATGTAGTTTATGTGAATCAGCAACCTCGACAAG
TTCGCATCGGACTGGAGCTACCACCGACCGCAACGATGGATGATTTAAGAACGACACTTC
ACGCAGATACAGGAATTGAACGCGATCACATTATATTAGCTGAAATCAACGAAGCAGGTT
GGTGCAACGCTCGTGCAAACTGGGAAGTTGCTGGTATGGATTTCGGCTCGCTGTATTGTT
TAGAGGCTCCGCCATTATTACAAACGCCAACAACTCCATACCTTCTCTTACTATGGGTCA
ATATAATTGAAGGAGAACGATTTGGTTCACCATATGCAATGCAAGTTCCGCGGGAGATTT
CTTATGAAGATTTACAGAAGTTGATCTTGAAGGAAATGAACCAGATTATATCCGAACGAG
TTTTGGAAAACGCACAAGGAACTGATATATTCCGCGCGAGGATAGCTGAGGCACATCGAC
CGCGGGACCCAGCTTATTTGCAACCAGAGCTACCGCATCCATTATTCGCCTTGGACGTAG
AGCAAGCCTTGTGTCCGCACGATAAACATCCACATCTCCGGTTGGAACTGCTCTGGGACC
CCGAGCAACGTGACAATATAATCCGCGAGTGCAAGGAGCAGTGCGAGGTGCACGTGTCCG
CGGGCGGGGGGGGCGCGCCGCCGCTCACGCTGCACGCCTGCCTCACGCACTACACGCGCG
CCGAGCGACTGGGACAGGACGACGCCTGGAGATGCCCTCAGTGTCAGAGGTACATGCCTG
TGGTAAAAACATTGGGACTGTGGTCACTACCGGACATATTAGTAATACATTTGAAGCGAT
TTAGACAGCAGCCTAAAGGCCGGACGAGCACGAAATTAACAACAATGGTAGAGTTTCCAC
TCAACGATTTCGACATGACGCCGCACCTCGCGCACAGGAACTCCTCGGCGGAGTCGCCGG
GGCATTCGCGGTCACCACGGCGGAGATACTCAAAAACGTCAACACTGAATCATCACGATA
ACGTTTACGATTTGTACGCCATTTGTTATCATCACGGCGATGACTTAGAAACAGGTCATT
ACACTGCCGCCTGCAAAAACCCTTACGACCGCCACTGGTATAAGTTCGACGATTCAAGGG
TGACACGGATCGAAGATGAATGTGCCTACGATGAGTTGGTGAACAACACCGCGTACATGC
TGTTTTACAAACGGCAGAAGCCGACCGTCACGCACTCCTATAGCTCCGAGGAGTACGGCG
GCCATTGGGCGCTTCGCATGCCTAAATACGTAAAGAGGACCACGGAGACATTGAAAGAGC
TGACCGAGGTGAAGGAAGAAAACGTCGAAGAAACCAAGATCGATTCGTCGCCCGTCGAAC
ACGACTCTGAGTCTGACGTCACGGCCGTCACGCGCAGCCCTTCGCTCTCCCGGAGCGCGA
ACAGTCTGCTCGACGACGACGCGCCTCCCGCTAGCAACATCACGACGATAATTCAATCGC
CGACCCTACAGAGGCCTCTCATTGTAGAAGTCAATGGAAATAACGTTTGTACAAACGTAA
ACGAACGCGAGTCTGAGCCGAGCAACTCTATCGAGCTGTATATTCACAAGGACGTGCACG
TGAATCCAAAGATGACGCCAGTGGACGGTCGCCGCCCACGCTCCGTGGACATTCCCGTCA
CGCTCTCTGCACCCCACTCCGCCCCCCTCTCCGCTCCCCACTCCGCCCCCCACTCTGCCC
CATTCTGCACTAAAGACTCGAGTAGGAACTATGAGAGCTCCCCCCTAGTCGCGAGCATAA
ACGAAGTGGAGTACCATCCCACAACTGAAGAGTTGATGATGTCGATGTTTAAAGAATCGC
AGTTTATCGTTCCCAGGCGCCCTGATCGGGTCCAAGGAGAATCTCATCATCCAGGAGAAA
AGACTTCTGCATGGAAAACTCGAATATCGACATGAAAAAAAGATATCGATCATTGTATAG
TTATTTTGTTCACGAAAGAGCTAATTATGTGTTTAAAATACGTCATATTTTAGATCTGAA
CGTATCATACAAGCAGCTATTACTTTATATTTAGTGTTTTCGAAACTTTTGTAAACGTAT
GTTTCTATATTATTATTTGTTGTACAAACAAGTGCAGAGGCTTATACTGTAGCGTGGTAA
GCAAGATAATAATTTATGGCTTTTAATTATTTCCAATATCCTCTAAATATGAATCCAAGT
CTTCGATAAAATGCCAACATTCATTTTATTTGACGTTATCATTCACCAAAGAACAATACT
CATTAAATGAGGAAGGTATTTATCAATCTCATAGTTTTACATTAAAAGTGTTTGATCATT
TAACGTAAGTTTCTAAGTTGCAACTGGTTTTTTTTCTTTCGGATATTATATATTACCTTA
GTATATAATTCAATTAATCAGAATTTCGAATTAATATATTAAAACAGTTGTGGACTGTGG
ATGTTCCAATATTTCCTTGTTACCAAATACAATTTTATATTAGAATAAAATTGCACGTAA
TATAAATAAAATGTTTTCTGTAATAACGGTTATAGAAGTAAAATAAATACGAACGAATGA
AGTGAAATACGAATATTAAACTAAGCTTAGATCAGTATGGACTACTATAGACGATGTTAC
GACATTTCATTAAGACAACATAATGTGCCTTCACTGTAGAGATGTTGTGATTTTAAAAAT
AAATATTGTGTAATCTTTTATAAATAAATAAAAAGCCTGTATACTGGACGACATGATGTT
TTGAATAGTGTATTATAGTATATTTATTCATATTGTGTTCGATGTAATGAATATATTAAG
TGTATAATACATTATGTACTTTTTAGTGATAAGTTCAACAGCTATATTTATATATAAATA
AAATTTGTATGGGTATTTGATTTACAAAGAAATAATGATATTCGGTTTTGGATATAATTT
GGATACAGTGGTATATGTGATGTGAGTGCACACAAAGATGTACAATGTAATGCACTTTAT
TGTGATTTTATATGATTTGTATAAAAATATTTTTATAAAAGACAACATTTAGTCATATAG
AAAATGAATATTGTAACAGGTGGCCTCAATCAACTGATGTCAACACTAATACTAATGAAC
ATTTTTTCATCAAAATTTTGATATAAGGCGTCACTGGAGTGCTACTAAAGTGGTCGGAGA
GGTTTGATGGCTTAAAAACTGTTTTCACTAATTCGAAACACATTATTTATAAAAAATTAT
TGTAAAACTAAAATTGGCGATTCACTGAATGATGAGTACTTACTTTAATTTACAGATTTA
AAAATATTCGATTCACTATGTACCTGTTTGAATCACAATTCGAATGATAATTTAAAATAA
TGTATACATAGTTTAATTTGGGAACTTTATTTTAGGTTCAACTGCGGCTGGCCTCGAAAA
TAAATATATAATTTTAATATGCAAGCTCTCAATTTTATAATTACTTTATATTTAATTATT
TTAGGGGAAAAGGATGACCTCAAAAATTTAAAATTTATTATCAGAGAAAATTGGATTACT
ACTTAGTGGTGTAAGTAATTGATTTACCACAGCTATCAAGACAGCAGTTACATCCATATG
GTCCACTATATATGGACACTAATACACTCTACTCTAAAACAAACTGGTCTAATAAAAGCT
TTATAATTATGCATAAAAAGTTATAATCAAAGCACGTACCAGAAAATTTTAACAAAAAAA
ATATGTATATGTACGTGTGAGGTCTTCGCATTTCCCTGTTTTTATATAATGTTCATTGTT
ATAATTCAAATGTTTATTTTAATTTCACCAAGTTATGTTTAAAATATAAGTGTTATGTCC
ACATTGAAGTTGTTTTGCAATTGTTCACCGTTGCCGTCATATATAAATCTAAGTTACGGT
TCGTCTGATTGTGAAACAAGTTAATAGGTGACCGTGTTTTGGACAAGAAATCAGACGTGT
ATTTGGAGGTTGGTTGATTGTAGAGTCACCAGTGCGAACACCTACAGTACGTGGATAGAT
AGACAAGCTTGCTATCCATTTGATGAAAAGTTGTCACTATCGCCCGTGGACGTCTGTGGA
GGGGGCACAGACGCACAGTTACCTACCTTAAAT
(5193 bp)

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