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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp66293_c1_seq1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		PREDICTED:_patj_homolog_isoform_X1_[Bombyx_mori]
Ontology
GO:0001736 P establishment of planar polarity
GO:0002009 P morphogenesis of an epithelium
GO:0005080 F protein kinase C binding
GO:0005515 F protein binding
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005875 C microtubule associated complex
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005918 C septate junction
GO:0007043 P cell-cell junction assembly
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0008594 P photoreceptor cell morphogenesis
GO:0016020 C membrane
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016332 P establishment or maintenance of polarity of embryonic epithelium
GO:0016333 P morphogenesis of follicular epithelium
GO:0016334 P establishment or maintenance of polarity of follicular epithelium
GO:0032033 F myosin II light chain binding
GO:0034332 P adherens junction organization
GO:0034334 P adherens junction maintenance
GO:0035003 C subapical complex
GO:0035088 P establishment or maintenance of apical/basal cell polarity
GO:0035209 P pupal development
GO:0035509 P negative regulation of myosin-light-chain-phosphatase activity
GO:0045176 P apical protein localization
GO:0045179 C apical cortex
GO:0045186 P zonula adherens assembly
GO:0045196 P establishment or maintenance of neuroblast polarity
GO:0045494 P photoreceptor cell maintenance
Transcript
Level		FPKM:0.60 TPM:1.05
ORF EntryO_BomoEE12765_complete:A_BomoEE_comp66293_c1_seq1
Sequence
(Nucleotide)
GATTATACACTTAATACCTATTTGAGAGTTAAGTGTATAATCTATGTTTGAGAGTGAATA
GCTAGTCTGGACTAAAAATTAGTTTAATGTTTTTTGGGAGGCACTTGGATTACCTGGTTA
TTAATTTAATTTTGTTTTAAGCAATATTAAACTAAACGTTAAACCAACTTTTAGTTGCAC
GACGTATAAAGCGAAATAAGTTTATCTTGATTTACCTCTAAACTTTTCAAAGGTTCGATT
TTGTTTTCTGGAAATATATGTGAGTATTTAACTAATGTTTTGGAATTTAGGATGCATTGC
AATATGGATATTTAACATACGGACGTTATCTATAGCTTTCAAGATGCATTTGGGCGTGAA
CGTCTCAAATGCATTACAGCAATTGGAAAGTGTGAAAGCTGCTGTGGACCAGAGCAATGA
TCCCAAGCTTAAAGCTGCAACCAGTGATGATTTGAACATGCTAATAAGTTTATTAGAGAG
TCCCATATTACGAAGTATTACTACACTTCATGACTCTGTGGGCATGCTTGCAACTCAGGT
TGCACATCACCCATCAATTTTACCTGGAGATTTTGATATTACTCCTGCTGGTGACTTGGC
ATTACAAACAAGAAATTTGTATGGAAATCAAGAGGGTGAAGAGGAGCAAAGGGTGCCACA
GGTCTCACCTCCACATAGTATGGAGTTTGGATCTGATAATGAACATATTCTTGGACTTGA
TAGTGGCTCTGTTGACTCTAACATGTCTCCTAAACAAAGTCGTGGCTTATTAGATTTGTC
TCGTAATGATGATTCTTTAGCATCTACCAATCACAACGTAGTAGCAGGGGACTGGGCACA
AGTTGAAATTATAAATCTTGTAAATGATGGAACTGGCCTTGGATTTGGTATTATAGGTGC
TAGAACAAGTGGTGTCATTGTAAAGACGATACTAGCAGGTGGTGTAGCTGATCGCGATGG
CCGACTAAAATCTGGAGATCACATTCTACAGATTGGAGATGTAAGCCTTATGGAGATGGG
TTCCGAGCAAGTAGCTGGTGTGCTACGTGCGTCCGGTAGTCGTGTGAGGCTCGTCGTGGC
GCGAGCAGTGGATCCGGCGGCCTTGCATGCGTCACCCGCTCCCGTCGTGCCTGCCAGGCT
TTTGTCAGACCCCGAATCGCTGGATCGCTATCTCATGGAAGCTGGTTTTGAGCAAGTGTT
CCATACGCAGCCTGTGCCTGTCAGCTCCACTTCGACGAGATTTGTATTTGACAATCCCAT
AACACCCCCTCCAGATTCAGATGCTGAATCACCAGAAGTTGATAGATTCACAGTTCAACT
GAAGAAAGACGAGAACGGCTTAGGGATTACTATTGCAGGTTATGTTTGCGAAAAGGAGGA
GCTGTCAGGTATATTTGTGAAGTCGGTGACTCCGGGGAGCGCTGCAGCGTTGAGCGGAAT
GGTGAGGGTCAATGACCGCATCGTTGCCGTCGATGGCGTCTCCCTCGCAGGGAAATCCAA
CCAGCGCGCTGTGGACGCCCTGAAACAGAGTCGCAACGTTGTCACGCTAGAACTAGAAAG
ATACCTGCGTGGTCCGAAATATGAGCAACTGCAGCAAGCGATAGCGGCGGGCGAGGCGGC
CGCCCCCCCTCCCCCGCCCAACCCGTTCCTGCACATGCACCGTCCCGACGCACCTTCTCC
TGAAATAGAAATACAGCTCTCCAACCTCCAAATAACGGATAACGGCACAGATGACGCTGT
GCCTCTAACTCGCAGCAGTCCTCCGGCGACTGCACTGCGTCCGGCACCAGCGTTCGAGAT
GCCACGGACTCCTGAACAAAAAGAAGCGATAAGAAGGAAATGGCAGGCTATATTAGGCGA
GGACGTGGAGATAGTGGTGGGCGTGGTGGTGCGCGGTGGGGGTGGTCTGGGCATTTCGCT
AGAAGGCACCGTGGACGTGGAGGGGGGGCGCGAGGTGAGGCCGCATCACTACGTGCGCTC
CGTGCTGCCCGAGGGGCCCGTGGGCCGCGCCGCCGTGCATCGCCCCGGCGACGAGCTGCT
CGAAGTGAACGGTCATCGGCTCCTGGGCATGAACCACTTAGAAGTGGTGTCAATTCTGAA
GGAATTATCGAGTGAAGTCTGCATGGTGTGTGCGAGACCTCGACCTGCGCCCCCTCTCGA
CCTAGCGCCGCCTGCCACAACATTAGTGAAGGCGAAATCGGACGGTAGCCTGGCGGGTGC
GGGTGCTGAGGAAGGCGGGTCGCTGTCCGCCGCTGGGAAAGTTCGTTCCCGGAGTCTCGA
ACCACTAACCGGACTTGCTATGTGGTCTTCTGAACCCCAGATAATAGAGCTAGTGAAAGG
CGAGCGTGGTCTGGGGTTCTCGATCCTGGACTACCAGGACCCGCTGCGGCCCGCGCACAC
GCTCGTCGTCATCCGCTCGCTGGTGCCGGGCGGCGTGGCGCAGCAGGACGGCCGCCTCAT
ACCCGGGGACAGGCTGCTCTTCGTTAACGATCAGAATCTTGAAAATGCGAGTCTAGAGCA
AGCGGTGGCGGCGCTGAAGGGCGCGCCCCGAGGAGTGGTCCGCATCGGGGTGGCCAAGCC
TCTACCGCTGGCCGACGCGCCGCCGCCGCTGCCCACCACGCCGCCCCCCAACACCTTGAG
GTCCTCCTCTTAAACAACTCACTTCAACGAACAAACCACATATCACCGGCAGTACTGCGA
TTACACAGCCCACTGGGTTTCTCGCCGGATCTTCTCGCGTTTCCGATCCGATGTTAGATT
CTGCGAAGCACTGCTTTT
(2778 bp)

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