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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp65900_c0_seq6
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		putative_seven_in_absentia_[Danaus_plexippus]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007275 P multicellular organism development
GO:0007423 P sensory organ development
GO:0007601 P visual perception
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0045676 P regulation of R7 cell differentiation
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
Transcript
Level		FPKM:10.41 TPM:18.15
ORF EntryO_BomoEE12366_complete:A_BomoEE_comp65900_c0_seq6
Sequence
(Nucleotide)
GTTTATAATTCTTTAAGTCTCGTTCAATTGAAGAATATAAATAAAATAGCTATGGTTTCA
ATAATAATCACTACCTACCTACTGTTCAGAAGACCAGTGGCGGTTGTTCGACGTAGTGCT
CAGTGTGGAGATAACTTTGGAGAAAATGTGTCTCATACAAAAAATAATTTGAAACCTTGA
CATATAATACAATTTTCTTGTTTTAACAACCAATAACCAGAACAAAGGTGACGTCCTAGA
CTGGTGTTTGGTCAGTTCAAGTGAATTTCATCAAAGCAACGAGAATATAACAGTGGAGCT
TGAAAATAGTCGCGATCAATAATGTTGTACAATTACATTTGTACCCTATGTATGTGAGCA
AAAGTAGATCGTGCTGAATTGATTCATAGCAGTGCTCCAGTCGACAATCAACGATGGAGG
AGAGTCGGCCGCCTCAGGACGGTGAAGAGGAATTGCCAGATTTGGACATATTGCTGCAAT
GCCCGGTATGCTATGAAATACCGTTAGGTCAGATTTACCAGTGCAACGAAGGGCACCACG
TATGCGAAAGATGCAAGTCCCGCATCAACTTGTGCCCGGTTTGCCGTGCCCTTTTTTTCG
GCACACGGAACTTTGCCATGGAAGAATTAATTGGCAACTTCCGCAAACTGTCGGCATTCA
AACTTGCCGGACGCCACACTACTGGCATTCTGGCTCCAGATGGCTGTTGGCCTCCGCCGA
GAGACACTGATTCTGATGACACGGACTCTGATAGCGACATCGACGTGTCCCTTTTAGCCG
CACCTAATCCATGCAAGGGTGTATTCCGCTGCCTTTGCTGTGATCAAATGCATCAAGTCA
GGTTGCCATCAGCACGAATACTGAATCACCTACGCTATCATCACGCACCGCAACTTATCG
AGGGTGATGCTGAAAACGGCGAATACATTAGGGCCTGGCAAGTAAACACCCGTTGTAAAA
AACTAGTAACCGCTCTGCGTGTCACGAATATGGGCATATTTTTCTTAACAATCGAAATGA
GCGATGAGAAGATATGCGCTTGGCTGACCATGGCCGCCTCGCCCTGCGTCTCGCTTTGTT
TCAGCTACACTCTCACATTGTCCGGATGCGACCGCGAAGCCATTTTCATTGACACCGTGT
CATCCGTGCGTTCCTGCGAAGGTTCGTTAAAGAAGCGCGGCCATTGCTTGGTGGTGACCG
GAGCCGACTCTCGTGCTCTAAACGCGCCCCTCGTTATAAACACGAAACTTACGATCCGCC
GCGTTCCCTTGAGTCAACTCGCCGACGAAGCCGAGCCGCGTTTCTTCCTCCGCGTCGCGA
GCCGCAGCACCAGGCCGACAGTGTCCCGCGCTCACCGCGAGCTGGAGCCCTTCCTAGAGG
ACTTGCAGGAAGACGTCGCGAGACTGTCGCGCGCCTTCGCTTCGCTCGGTCACGATGCTC
TGATGCGTTTGAACGACGCCACCGGAGGGCTCGGCTTATTCGCGGCCGAATTTCCGTTAC
GCGACGAACTGGAAAACGAACGCGAGTTGTCGCGCAACGCACGCAGGCGCATGCGTCAGA
GGCTGAGAGCGGCACTGATCCGCGAGCGACGCGCCCGCGAACACTCCTCCGACGATTCGG
ACGAAGAGAACATTCGGATTCTCCAGATACCAAATAATAACAGCGTTCGCCGGACCGGCC
TCGCTTCACTGCAGCAGCCGACAGAGGGCCCAACTAGCGGCCCATCCGGCAGTGGCATCT
CCAGCGGCCCATCTAGCAGCGGCCAATCCAGCCTTGCCTCTAGCAGCAATGTTAGCAACG
AACAAGGCAGCGAAAATCGCCCCAACACTAATAAAAGGAGGCGCCGTCATCGCCGTTAAA
CTGAGTCTGATGTCTCACGTCTTTCAAATACGTGTAATTAATAAGTAGAATTTGGTGTCA
TAAATGTAATTCAGTATGGTGTTGATTATTCATTGTTTGCCGTGTCTGAACTGCTTCAGT
CCCTAAGTGTTCTCGTCAGTATAAAATTTTAACGTATCGCTGTTTTAATAGAAATCGTAT
AATAATAATCACATATTTGAAATTAATATATTCGTTACAAATTATTAAGATTGTATTACT
TCATGATGGATGTTAGTATAGACATATAAATTTTAACTAATAAATGAAATAGAATAGTAA
TTATATAATAATTTAAATGTGTAGTGTTATTTTTATTTGTTTTGTTGAAAGATCATTTTA
TTTGCTATGACGATGTATTCGCTTTTTATGAATTTACTATGATGAAATAATAAAATATGG
ATGTGTCTTCTAGTAACGATCAATACAATTTATTCTTGCGCTTAACATCAATGGATTTAA
TCATAAAAGTGTATACCACTGTAGCGTTATCATTAAATACTTGTGTTAATGTACTTGTCC
ACCGAGACTATAATTAAACTTACAAATAAATGAAATTAGTACATTTCTTATTCGACTTTG
ATTATCTCCTGAATAAAAC
(2479 bp)

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