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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp65900_c0_seq4
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		putative_seven_in_absentia_[Danaus_plexippus]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007275 P multicellular organism development
GO:0007423 P sensory organ development
GO:0007601 P visual perception
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0045676 P regulation of R7 cell differentiation
GO:0046872 F metal ion binding
GO:0050896 P response to stimulus
Transcript
Level		FPKM:1.58 TPM:2.76
ORF EntryO_BomoEE12363_complete:A_BomoEE_comp65900_c0_seq4
Sequence
(Nucleotide)
TCCCAGGTTGAGCCCGTGAGCTCAGCTACCCGTCGAGGCGTAGCTAGAATTAGCCTTACC
CCCTTGGCTGCCAGTGAATGGGAAGGAAAAAAATTTAGCAATGACTTGAAATCTTGTTAA
ATTTAGCAGAATAGCATGCACATAACTAAACTATATAACAAACAAATTTCTCGTAGTTGT
AATTGTAATGAAAACAAAATTCCTAAATACGCTCAATTTTAATGAACTTATTGAAGCAAA
TCTTTTCGTTTCGTATCTTATAAGTTAGATGATGTACAATCAAAAGTTCGGGTCAGGAAA
TATCGGTGGCACTATTAAAGTTTCACTCATTGAGGTCCGATACATTACCTCATGTGTGCT
GACCAGTATCCACGATTAGGCATTACGTCGTCTAAGTTAAAACCACCGTTTGCGTTTTAG
GACGGTGAAGAGGAATTGCCAGATTTGGACATATTGCTGCAATGCCCGGTATGCTATGAA
ATACCGTTAGGTCAGATTTACCAGTGCAACGAAGGGCACCACGTATGCGAAAGATGCAAG
TCCCGCATCAACTTGTGCCCGGTTTGCCGTGCCCTTTTTTTCGGCACACGGAACTTTGCC
ATGGAAGAATTAATTGGCAACTTCCGCAAACTGTCGGCATTCAAACTTGCCGGACGCCAC
ACTACTGGCATTCTGGCTCCAGATGGCTGTTGGCCTCCGCCGAGAGACACTGATTCTGAT
GACACGGACTCTGATAGCGACATCGACGTGTCCCTTTTAGCCGCACCTAATCCATGCAAG
GGTGTATTCCGCTGCCTTTGCTGTGATCAAATGCATCAAGTCAGGTTGCCATCAGCACGA
ATACTGAATCACCTACGCTATCATCACGCACCGCAACTTATCGAGGGTGATGCTGAAAAC
GGCGAATACATTAGGGCCTGGCAAGTAAACACCCGTTGTAAAAAACTAGTAACCGCTCTG
CGTGTCACGAATATGGGCATATTTTTCTTAACAATCGAAATGAGCGATGAGAAGATATGC
GCTTGGCTGACCATGGCCGCCTCGCCCTGCGTCTCGCTTTGTTTCAGCTACACTCTCACA
TTGTCCGGATGCGACCGCGAAGCCATTTTCATTGACACCGTGTCATCCGTGCGTTCCTGC
GAAGGTTCGTTAAAGAAGCGCGGCCATTGCTTGGTGGTGACCGGAGCCGACTCTCGTGCT
CTAAACGCGCCCCTCGTTATAAACACGAAACTTACGATCCGCCGCGTTCCCTTGAGTCAA
CTCGCCGACGAAGCCGAGCCGCGTTTCTTCCTCCGCGTCGCGAGCCGCAGCACCAGGCCG
ACAGTGTCCCGCGCTCACCGCGAGCTGGAGCCCTTCCTAGAGGACTTGCAGGAAGACGTC
GCGAGACTGTCGCGCGCCTTCGCTTCGCTCGGTCACGATGCTCTGATGCGTTTGAACGAC
GCCACCGGAGGGCTCGGCTTATTCGCGGCCGAATTTCCGTTACGCGACGAACTGGAAAAC
GAACGCGAGTTGTCGCGCAACGCACGCAGGCGCATGCGTCAGAGGCTGAGAGCGGCACTG
ATCCGCGAGCGACGCGCCCGCGAACACTCCTCCGACGATTCGGACGAAGAGAACATTCGG
ATTCTCCAGATACCAAATAATAACAGCGTTCGCCGGACCGGCCTCGCTTCACTGCAGCAG
CCGACAGAGGGCCCAACTAGCGGCCCATCCGGCAGTGGCATCTCCAGCGGCCCATCTAGC
AGCGGCCAATCCAGCCTTGCCTCTAGCAGCAATGTTAGCAACGAACAAGGCAGCGAAAAT
CGCCCCAACACTAATAAAAGGAGGCGCCGTCATCGCCGTTAAACTGAGTCTGATGTCTCA
CGTCTTTCAAATACGTGTAATTAATAAGTAGAATTTGGTGTCATAAATGTAATTCAGTAT
GGTGTTGATTATTCATTGTTTGCCGTGTCTGAACTGCTTCAGTCCCTAAGTGTTCTCGTC
AGTATAAAATTTTAACGTATCGCTGTTTTAATAGAAATCGTATAATAATAATCACATATT
TGAAATTAATATATTCGTTACAAATTATTAAGATTGTATTACTTCATGATGGATGTTAGT
ATAGACATATAAATTTTAACTAATAAATGAAATAGAATAGTAATTATATAATAATTTAAA
TGTGTAGTGTTATTTTTATTTGTTTTGTTGAAAGATCATTTTATTTGCTATGACGATGTA
TTCGCTTTTTATGAATTTACTATGATGAAATAATAAAATATGGATGTGTCTTCTAGTAAC
GATCAATACAATTTATTCTTGCGCTTAACATCAATGGATTTAATCATAAAAGTGTATACC
ACTGTAGCGTTATCATTAAATACTTGTGTTAATGTACTTGTCCACCGAGACTATAATTAA
ACTTACAAATAAATGAAATTAGTACATTTCTTATTCGACTTTGATTATCTCCTGAATAAA
AC
(2462 bp)

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