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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp65854_c0_seq1
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_E3_ubiquitin-protein_ligase_UBR1-like_[Bombyx_mori]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0005737 C cytoplasm
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0008023 C transcription elongation factor complex
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030163 P protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
Transcript
Level		FPKM:11.30 TPM:19.70
ORF EntryO_BomoEE12298_complete:A_BomoEE_comp65854_c0_seq1
Sequence
(Nucleotide)
TGCACAGTGCACCCCTATTCCTTAAGTATATCTGTTTCTTTGAGTGTTGGACATTTTTTG
TTTTTATTTCTCGTGAAAAAGAAAAATGGTATTCGATCATTTTAATATAGATTTTGTGAT
TTCGTATTAAATATTCAATAGTTTGTTGTATTTATCATTAATCTGTGAACAAGAATGTTT
TTATAGAGATCATTGCAGTTCGATGTGCTGTGATGAAATGTCAAAATTTTCGTGGATTAG
TGCCAGAGAAAATTCGATTTCATGAAAAATTGTGAATTAGACATAATCACGGATTACGAC
AAATTACTAATTTTTTTCTAGTGTTTTAATTCTATTTACCTAATAGTGCAACATTTATGT
TTGATGATTGTGCACATTTCACACTGAAGGGTCCATAACGACTGGTGAGAAGTGGAGATG
AGTACTCCACCGCCAGTGCAGCTGGAGGTCGAGGTTGGTGATGGCTCAATGGATGACGAG
ACCCCCGACATGATACCCGCCGACAGGTACACGTTGCCGGCTCGCGCTGATGCTGTAGTG
GAACTATGGCGGAAGAATCTGCAGGAGGGTGTACTGGCGCCCTCGCACTTTCAAGATCAT
TGGCGCGTCACCGTTCCGAGAATATATTCGCCACAACCCAACAGAACATGTTTGGACTGG
TCTTTCGACGAGGAACTAGCTGCCAAATTGCTCATCCAACCCCTAGAACAGTTCATATGG
GGTACAACAGAAGGATCTCAACCGGGTCCCCCTCGTCGCTCTACACTCTGCGGACGGGTG
TTCAAACAAGGCGAACCTGCATATAGTTGCAGAGAATGTGGCATGGATAACACTTGCGTA
CTCTGCGTGGAGTGCTTCAAGGTATCAGCTCATAGACACCACAAGTACAAGATGGGGCAG
TCCGGTGGCGGCGGCTGCTGTGACTGCGGTGACGCCGAGGCCTGGAAACGGGATCCATTC
TGTGATTTGCATGCTGCTCCAAGCGATCAACCGCCCGAGGCAGGCATAAGCGAGGATGTT
ATAAGAAGAATGAAGATCGTAGCATCAGCTTGTTTGACTTATTGTCTAAGGCTGCTTACA
CACGATCACGCTCCATGCTTGCCGAACGATCTCAGATTGAAAGACACGGAGCGCGACATC
CTGCAGATACTGGACCAGCCGGATTGTTACTGCACGGTGCTCTACAACGACGAAACTCAC
ACCTTCGAGCAGGTGATAACAACGTTGATACGCGTGACGAAGTGCAACCACCGCGACTCC
GTGGAGCTGGTGAGCCTCATCGACCGCGAGGGTCGGGCGCTCATCAAGTGCAACTCGTTC
CAGGTCTGCGACAAACTCAAAACGGACATCGAGATGTTCACGGCGCGCCAGAGCTCCACG
CTGAAGGTGCTGGTCATGCACGCGCACGTCATCGCGCACCAGACCTTCGCCATGAAGCTG
CTCACCTGGCTTCAGAACTTCGTAAGCCAAGAGCAGAGTCTGCGCATGGCCGTGTCCCAC
GTGGCGCTGGGCGAGGACATGTGGGGCTCGAGCACGGCGGTGGGGGGCGGCGGGGTGGCC
GTCGGCGTCATGCAGAACGACTTCCGCATGTGGAAGGCCGCCAGGACCGCCTGGCATCGG
CTGCTCATCGCCACCACGCTCATGGACTATTCTACGAAGAGAACCATGGCTATATTATTC
ACCAAAAATTATGGCTCAATACTGAAGGACTTCATACGAGACGACCACGACCACTCGTTC
TCGATATCGTCGCTGTCGGTGCAGCTGTACACGACGCCGACGCTGGCGCACCTGCTCATC
GCGAAGCACGACGCGCTCTTCGTCGTGCTCAACACTTTTGTGAGCGAGTGTAACCGACGC
TGCAATAATGGTCGTCTAGAGTTCGATCGCAACCACGTGTCGGTGGCGTACAAGCGCGCC
CAGTTCGTGCTGTTCGACGTGAAGTACCTGCTGGGCTCCGTGCCGGCGAGCTTCGACGAC
GACCTGCGGAAGGGTTTCCTGCACGGGCTCTCGTTGCTGCTCAACCTGTTCGTCATGATG
CAAGGGATGGACTCGGTTGTTAGACAGGTGGGTCAGCACATGGAATACGAGCCGGAGTGG
GAGTCCGCGTTCAACTTGCACGTGAAGCTGGCGCAGTCCATCACCATGTCGCTGGAGTGG
TGCGCGGCCGAGCGGCCCCTCACCGCCTCCGCCTACCGCATGGCGCTGCGCCGCCACGCC
GCCGCCACCGCGCCCGCGCCGCGACAGCTCAAAGAGCTGGGTAACCAGAGCGCGTCCGTG
ATCCCGTACGACGTCTCCGTGGACCCGGTGTCGATCCATCGTCCCCTGTCGCGGTACATT
GCGGGCCTGCACCTGCTGCTGCACCGCCACGGCCTGTCCTACCACAGCCCGGAGTTCGAT
CGACAGGACAAACAAAAATCGTCGCCGGAGGAACTCATCGAGCCAGTGCTGCAGACAATG
GCGATGATAGCCCAAGTTCACGCCGGCATGTGGCGGAGGAACGGCTTCGCCTTACTCAAT
CAGCTGTATTTCTACCACAACGTGAAGTGTCGGACCGAGATGTTAGATCGGGACGTCGTC
ATGCTGCAAATTGGCGCATCTCTAATCGAAAGCAACGAATTCATGATACACGTACTGAAC
AAGTACAACCTACTGGACTGGGCGTCACCTGAATTCGAGAAGCAAAGCATCGAGGACGAC
ACACTGAGACACACAATTAGCATGGTGGAAGAGTTCCTGGGGCTACTAATTACTATTGTC
GGTTCTCGCCACGTGCCCGGCGTCGGGGAAGTGACCAACGAAGACAGAACAAAAAAAGAG
ATTATACAAATGCTCTGTGTTAAACCGATGCCACACTCGGAACTCAACAGGTGTCTACCA
GAGGATCAACTGCACGAAACTGGTCTCGAATCTGTCATCAACGAGGTGGCGGACTTCGTG
AAGCCAACGAGCGGCACGAACCGCGGTCTCTACAAACTCAAATCGCACTTGTACGATGAA
TACGACACTTTCTTCTATCATTACACAAGAGAAGAACTGTCCAGGAGCGAAGAGGAACAA
AGGAACAGAAGGAAGGCTGCCGGCCTGTCGGAGTGCTGCCCGCCGCCGGTGCTGCCGAAG
CTGTCGCCGCCGTTCTCGATGCTGGCGCACCTGCTGCAGAGCGACGCGGCGCTGCTCGTG
CTGCGGACCGTGCTGCTGCGGGCCCTCGACCTGCGGGCGCGCGCCTTCTCCGAGACGCAA
GTGCACAAGGCGCTCCACTTAATGGGCTACGCAATTCGAGACGAAGAGAGCGGCCACTAC
GAATTCTTAGCGTTCGCCGAAAGTGCGAATCGTTGCGGCCTGGTGGCGCTGCTACAGAAG
CTGGTGGCCAGTCCCAGAGTGGACGCGCACAGACATCTCGCCAAATGGGTGCTCACTAGG
ATAAAAGCTCTGTTAGGAGAAACGGACGACCAAGACGAACAGAAAATGGAAACTGATCAA
GAAGAGAAACCGAACGCAGCCGAAGCAGAAGCGGAAAAGGAACGTCGCGCGAAGTTAGCG
GCGGAACGTAGAGCTAAGGTGATGGCGCAGATGAAAACTCAAATGAAAAATTTCATATCC
AACAACGCTACATTGTTCGAGGAAACCAACACCGAGGTAACAGCTGAAGAACAGGACCTT
CGGCCTTTGTACTGCGGAGCTGCTCTCGGAGTGTGGGGGGGCGGAGTCCCGGAACCTCCG
CGGGTCTGCATCATGTGCCAAGAAGAGGCACGCGTCGACGGAACGGGAGAACCGCTAGTA
TTAGTGGCCTTCGTACAACAATCTGGTGTGCTGAGCCGGATCAGAGATGCTGGAGACAAC
GAGAGGAGTCGGGACGCCTGGCTGCCTGCTGGCATCAGGCCCCAGCCTCACGTCTCGAGC
TGTGGTCATGCGCTCCACGCTCGCTGCTGTAGGAATTATGTTGATGCTGTACTTGAAAAG
GAGAATCGCAGACCGTATCGCGGCCGCCAGCCTGCTGCCTTCGACGTGGAAAAGAAAGAA
TATCTGTGTCCGCTGTGCGAGAGGCTCTGTAACACCGCCCTCCCGCTACTGCCCAGTCCC
GCCCTCCCCGGAGGCACCCCGCCCCCTCTCACCGAGGAAATGTACAACGACGCCGTCAAC
CTCATCCTGAAACTAAAACACCAAGTGTGCTCCGAGTCGGTCCACGTGTGCACCGAGTTC
TGCGAGGAGATGCACTGCCAGGCGCGGGCCAGGAGCGTGGGCGCCATGTCCTCCGACATG
GAGGAGGAGTCCGCTGACGAAGCCGAGGTCTACGTCTCGACTCACTCGGAGAACTTGCTG
TCGCCTGAATTCCTGGTGCACTTTGAGGGCGAGGTGCCGCAGTACAATGAGCTTACGAAG
ACGTTAATCGAAGAATTTGCTAGTGTTTTACCCGCGTCCGAGTACGGCGGGATGGCGTCC
ACGGCGGCGCTGTACCGCGCCACGTCGTACACCGTGCTGAGCACCGACGCGCTGCTGCGG
GCCGAGCGCCGCCCGCTGCTGGTGGAGATCCCGTCCCGCCTGCGCGACGCGCTGCAGGCG
CTGCTCCGCATGGCGGCCGCGCTGCCCGCGCTGTGGCCCACGCCCAAGCACCTGGCGCAC
CACGCGCTCAGCTCGCTCAACACCCTGGAGTGCACCTCGCCCCTCACCTACGACCCTTTC
GGTACTCTAGTGGCCTTGGTGCTCTCCGCCCCCTCGCTCTTCTGCAAAGTGGCCGGTCCG
GCCCGACCCACTCACCTCGCTCGACAGATATCCCTGCAGGCGTTCAGAGCCAGTATGGTC
AAAGCCCTAATTGTGGCCGACCTCACGTCGTGCACCACCGAGGCGATGGAAGAACACGAG
GAATATAAAGTCAAGCCCGATTTAGAAAACTTGCTGTCGCTCGTTAAGGAGCTCCGACGC
GGGGATTTACCTGATAACCTCGATCCGAATAAAGTCTGGGATCAAATACAGAAACAGTGC
CACTCGTTCTTAAGGTGTTGCTGCATATTCTACTACTTCCTCAGCGATATAAACCCGCCC
ACGGAACTCACAACCGTCGACGGGGACAAGTGGGATATCATGTGCGGGTATCTAGATCTG
CCGCTCACTTTCAAGGATTTAATCGACAATCCGAACGGTAGAAAGAAGGCCTTCGCGTGG
GCTGCGCTGTCCGGGGACTGGTTCAAGGGCGAGATCCAGGCGAGCGTGGTGCTGGAGCCC
AGCGAGCCCCCGCGGCTCGTCCCGCTGCCCGAAGACTTCTCTGAACTGATGAACATCGCT
TCGGACTTCCCCTGCCCTAACTCGGACCGCGAGGACAGTAAAAATCCAACGATGTGTCTC
GTCTGCGGACAGATCTTATGTTCGCAGAGTTACTGCTGTCAAGCAGAAATTCCAAAGAGC
CGCGGCGGGGGCACGGAGCGCGTGGGCGCGGTGGTGTGGCACGCGCTGCGCTGCGG
(5456 bp)

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