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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp65812_c1_seq1
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_PHD_and_RING_finger_domain-containing_protein_1_[Bombyx_mori]
Ontology
GO:0006366 P transcription by RNA polymerase II
GO:0006397 P mRNA processing
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0019904 F protein domain specific binding
GO:0046872 F metal ion binding
GO:0070063 F RNA polymerase binding
Transcript
Level		FPKM:24.48 TPM:42.69
ORF EntryO_BomoEE12260_5prime_partial:A_BomoEE_comp65812_c1_seq1
Sequence
(Nucleotide)
TTTTTTTTTTTTTATTATAAAATTATTTGTAATTATAATAAATCGACAAACATAATTAAA
ATCTAATTTTATTTAAATAAAATTCTTTTAAGTAAAATACATTGTCCGTAGTCCGTAGAT
ATAAGCAGCATTGACACGGTGACGTCACACGTGGGCAGACGGACGCGCGGGTGCTACGCG
AGGCCGAGCTTGTGTTTCTTCCGGATCTTCCTCACGTAAGCCTCGATCAGAGCCTGGATC
TTCGTGGGGTTGATCTCTCCTGTTCTGTTGTGGCAGATCTTGGGGACAGCTCGTCGGAGC
ACATCCTTGTACTCTTCTTTAGTGATGCGCTTTCTGTTGTAGTGCGGCTTCAAGACCAAC
TTCACTTCTTCAACCACTCGCTCCTGTCTGTTGAGCTTCTTCAAGAATTTACTCTTGACC
TGCATCTCGACCGCAGAGCTGGGGAGTTCGTCCAGTATCTTCAAACTATCTTCATCTATT
TTCACACCTACTTGAGTCTTCCCTTTGTGACGGTCGAGTTTGACGGGCACTTTAGCTGCG
TTGGAGCGGGACTTGTGTCGGGGCCGGTCCAGCAGCGCCTCAAACATGTCGCGGCGGGGC
GGCTCGAACAACTCCCCGAAGTCGCTGGAGCCCGGGGAGTACGGGGAGTCCTCCCCCGGC
AGGGACACCGCCGGCGCACCCCCCCCACCGCTGCCCAGGGGGACGCGTGCTATCTTCGCC
GCCGGCATCGGCTTTATAGGATCCGACTTGATCGGAGAAGGCTTCGCCAGGAACAGCTTC
GGCGGCTGTGTCCGCGTCGCCTCCGGCAACACGATGCGGGGTGGGGCGGCGGCCGGGACT
TGCGGGGCGGCGGCCGGCGGGGGCCCGGGGGTCACTTCGGCGGTCGGAAGGGGGTCGCAC
GGCGGCGGCTCCGGAGACACGTCTCGAGTAGACTGCAGCAACGCCATCACCTTTTCCATG
GGTGACAGCGGTCTTCTGTCGAGTACTTCGTCGGCGGACATGTTTGTTTTTTGCGCGGCC
TCGAGCGTGATGGTGGGGCGCGGCGGACTGAGGGCGGGCGCGGGGGAAGGTGCGGGGGAG
GGAGAGGCGGAGGCGGACCTCGTGGGCTCGTACGGGTCGTACGCGTCCGGCGAGTCCGGG
GGCTCGGGCGGCGTGTTAGGGCCGCGGCCGTCTTCCGGGTCTGCGGCTGGCGCTGGCTCG
GCGGTCGTCGGCTCGGGCGGAGTCTTCGGTCCGACCGGTTCAGGCGCGGCAACCTCGGGG
GCCGGCGCGGGTTCCCTCTCCCCGGGGTCGCTGTCGCTGAGCACGATGACGTCGCGCGGG
GACGGCGTCAGTTCGCGGAATGGAGACCGCTCCAAATCAATGATGGCGACGGGTCGCACA
CCGACTTCGGGCTCAGGTGCTGCGGTCTTTCGTTTGCGACGTCGTCGCTCCCGACGTCTC
TCCCGTTTGTCGTCATCGACGACTCTGTCTTGATCTTTAAAGCTAACGCTGACCAGGATG
TTGTCGCCGGACGTGAACACCTCCTTGGACGCTCCGCCGGGATCGCGCGCGTGGCGACGG
TGGCGAGCGGGGTCGCGGCGCCGGCGGGGCGCGGCGGGGGGTGTGCGTGGAGACGCGAGG
CGGGAGGGAGAAGTCCATTGCGCAGGAGCGACAGGGGCACCGGAGACGGCCGGGGGCGCG
GGGGAGGGCGAGCCGCGTGTCGGAGACGGCGCCGGAACCCTGCTCGCGCTTCGATTTCGA
ATTCTGCGTCGCTTAGGCGATTTCTTTCGAGGCGATCGTCGTTTCGAAGCTGGCCTTTCA
GATCTTGCGCGTTTTTTTCTCTTGGTGGATTTGGGGCGTGGACTTCTCGAACCGGATACT
GATCGTCGCCGTTTCCGGGCACGTTCGGTTGAACGACGTCGACGCGGCTCATTTCGTTTG
CCGCGAGATGTGGACGTTCGCCGCCGCCGTCGGGGGCTCGGAGAAAGTGCGCGAGGGGTG
GCGGGGCGGTGTGGGGAAAGGGACCGGCGGATGCGGACCGGTGAAAGGCTAGGACGAACC
GGAGACGGTGAGCGTCGAATTCTCGGAGTAGGCGATCGACGCCGTCTCGAGTTTGACCTC
TTGCGGCGGCCGACGGGAGAGAGAGACGTGAGCCTTCGCGGCGGCGACGCTCGCCCCGGT
GAGGGAGTGCGGCGGAGACGGGACGGCGAGCGGCGAGCGCGAGAGGGGGAGCGCCGAGGC
GGAGGGGAGAGGGAGGGTGATCGAACTCGAGGTGAAACGTCACGCCCAAATTGATCTTTT
CGTTTCTTTCGCTTTTCACTAACAATATTTCTGACGTCATATCGCTCGAGATCTTTCCTC
TTTTCTTTCCTTTTTCGCTTACGTTTTTCTCTTTCCGCAGAGTCAGTGGACTCGCGACGG
TCTCGCGTTCCGTTTTTGTCTCTTTCCCTATAATTTCGTTCCTTACCGTTTTTGCTAAGT
TTCTTAAATTCAACATCAGTTTTCTTTTTGGTCTTTACTCGTTCTTTTGCATCTTTTTTT
GTGTCTTTCTTTTTCTTCCTTCCTTTGCCTTCGGAGTCCTTTGCGTCCTTCTTGCTGTCG
AGGGGCGGCGACCGCAGCCGTTCGGGCGGTCGCTCGGGGGACGGGCAGGGCGCGCCGACG
GACTTCGGTTTGTCCTCCTCCGAGAACATCTCGTTCCCTTCGTCTTCTGATATCATTTCT
GTGTCGAGTCCTTCGAGTCCTTTGTCTTTTTCTGTCTCGAGAGATGTATCTTTGGATTTA
TTTTCGTCGAGACAGGGCGTGTAGCTGCGCTCGTCCTCCGTCTCGCTGATTGACTCGGTC
ATCTTCTCCAGCGGCTCCTCTCCCCGCGGAGACACAGAGGCGGGTCGCTCGCGGTCGCCG
GGCTCGGACGTCTCCGAGTCGGACTGCTCCGTGTGATCAGATTTATGCGCAGTCTCCAAC
ACATCACTGCTCGGTATAGTTCGGTTATCTTTTACGTTTTCACCTCCGTCGGCTGCAGGC
TCGCACGAGGCTTCGGGGAAGGCATCTGCTTCCGTCACTTGCTTGGCGCTATCGAGCTCG
TGCGAATTTAGGTCACTATTGTGCAAGTCGGATGAGGCCATCTGTGAAACTGCATTATCT
TTATTATCTTCCGAAGAATTCTTTTGTGTTACAGTTTCCACTGATTTTTTATCCGTTTCC
ACGTTAGGTTCTACGCTTTTGGAAGGTGAACTCTCGTCTTCTGGAGGAGCTCCCGATTCT
GCCGGCATTGAATCTTCCTCTTCGTCGTAGAGAGACACACGCTTCTTTATCAACGAGGGA
GCGTTGATTTTTATTTTTATGGGGCTTCGAGTGTCGGTGGTGATGGGACACCTTTTCGAT
ACTTTTTCGTTGTAAATTTCATCAGATTTCTTTTTGGGGACAGCATCGAGGGGGGGCGGC
GGCGACAGGTCGTCGTCCTCCTGCACGAGGTCACGCAGGTCGTCGGAGGGGCGCGGGGCG
GGGTTCTCGGCCGGCAGCACGCCCGCGGCCGCGTCGTTGGCGATGTGCACGCTGGTGGCC
GAGTAAATTGAGAAGTTGGGGCAGTCGCCGTCGTCCTCCTCGTCGCTGAGGGGCGGCGGC
GCGGCCAGCAGCCCGCGGTGCTCGGCCAGCACCTGGCGCACGGCGTCG
(3648 bp)

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