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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp65743_c0_seq1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_THO_complex_subunit_5_homolog_[Amyelois_transitella]
Ontology
GO:0000346 C transcription export complex
GO:0000347 C THO complex
GO:0000445 C THO complex part of transcription export complex
GO:0000784 C chromosome, telomeric region
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006369 P termination of RNA polymerase II transcription
GO:0006397 P mRNA processing
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0030154 P cell differentiation
GO:0030224 P monocyte differentiation
GO:0031124 P mRNA 3'-end processing
GO:0032786 P positive regulation of DNA-templated transcription, elongation
GO:0046784 P viral mRNA export from host cell nucleus
GO:0051028 P mRNA transport
GO:0060215 P primitive hemopoiesis
GO:2000002 P negative regulation of DNA damage checkpoint
Transcript
Level		FPKM:41.82 TPM:72.94
ORF EntryO_BomoEE12217_complete:A_BomoEE_comp65743_c0_seq1
Sequence
(Nucleotide)
TAGGTCCGGAACTACGCATGTCTATTGCTGAGTAGGTACAATAATGAAGTATAATTTAAA
AAAAATCATAGTTAAAGACTACCTTTCAAATTAAAGGCTAACATTAAAAGAAAAATAATT
CAAACATTACCGTGAACGATGCTAGTAAAAGCTTTAATATATAAAAACAAATCCAGTGAA
TAGAGTGAATAGGCAGTAAGGTTGTAATTGTCTGTTTAAATTAGTGATTTTTTTAAAGTT
CCAGACTTGGATGAAATCTGATAAACTTGAATAAAACTAAACATGGGAAAAGAAGAAGTA
ACGGCTGTTAAGAAACGGCGCAAATTAAATACAAGTACATCAAATGACGGAACAAAGCCA
GTTCCCGTTGATGTATACAAGCGTGTTGTTGAATTTGAAGAAGCTGAAGCTCATCTGCGT
CCAGCTGATAAGGATGCTGCCTTTTTCAATAAAACATGCCAAGACATAAGGCAACTTTTT
AAAGAGATTGCAGAGTTAAAAACTAAAGAAACATTGGAGGCTAAAGAAAAGATAAATGCA
AAAAGAGTGGAAGCTTCATTACTGCTGGTTGCGTTAAAGAAATTAAATCGCCTGGAGAAA
GTACGAACTAGAGCTGGTCGTGATGCGCTCCATAAAGAGAAACAGAGAGTTGATTCCACA
CATTTACTGTTACAAAATTTACTTTACGAAGCAGATCACTTAAACAAAGAAGTAACTAAA
TGTTTACAATTCAAATCTAAAGATGAAGAAATAGATCTTGTGCCTCTTGAAGAATTCTAT
AAAAATGCACCTCCTGATATTATTAGATCAGAGGTCACAAAGGCTGATGAACATCAATTA
CAATTAGCCCGACTGGAGTGGGAGTTACGTCAACGTCGTGAATTATCTGAAGCCTGTAAT
GAACTCATATCTTCCAAGGAACGAGTAGCAGCTGCCATTGCTGCTGCACGTTCTAGACTT
GATGCATTGGCTCCACATCTGAAAGATGTCTTGAAATCCACTAAACCTTTGCAAGAATGT
CTTGCTCTACGCTTGGATGAAAAACGTGATGAAGCCAGGGCCGCAAGCTTGCTTCCAGCA
TCACTATTCCTACTATTTAAAAATGCAAACGCATATTCTGATATTTTAGGAAGCAAAGTT
ATTAGTGTTGGTGTTTGCGGTGATGAAGATGAAGCTCGCCGGCATGATCAAAACAATGTT
GAAAATGATATTATTTCATCAAATGAGTCAGATTCAGATCAAGAAAATAATGATGAAGAT
CAACAAACCAAAAAGAAACGACATCACAGAACTAAAAACGTATCTAAAGAAGACAAAGCA
GAAGCTAAAATAAAACGAGTATTCAAGAAACATCCTTTAAATGTACAAGTTTCAGTTAAA
GCAGAAGATGGTACTGCATTGAATCTCATATTATCATACCTCATAAACTTGAAAATTATA
GTTGTGAAGTTTACTGTATCGCTACCCAAACCTGTCACTGGTGTATCTGCTGCTGATGTT
CTAAATGGACATTCTATTTTAAATGAACTGTACCCAGGGGATACGGGAGATGATTCACCC
CACCCTGCAACTTCTTATTTACTAAAAAATGCAGGTATATCGGAAAGCTTTTCTTATTTC
ATACCAGAAATTGGACGCCCATACGTTTGGGCACAAAGAATGTGTGGAATTGATTTTATG
ACTTCAGAATTGAATGAGCAATCTGTTAGAAGAGCTGTTGAACCGTGTCCTAATCTCAGT
GTCGCCACTGTTGAAAATTTTATCATGACATTGAAAAAGAGACTAAAATGTAGAGTAAAA
CTTATGCATGAGCTACAAGATCTAGAATCAGGAAAGATTTCACCACCAAAAGGAAGCTTG
CCTCCTTCTATGCGTCTAGCAGGTTCTTTGACTCAGTGGCAGTCTGTTGGTTGGCCTGAA
TACAGTCAGGCTCCATCAACAGCTTTTCTTGTAACTGAAGGTTTAGTATCTGCAAATGAT
TTACTTTATAGAGCGATAATTACCAGACAATCAGCTAAGTTGGTGGCTTTAGTTGCCCTC
AGAAGCGATTATCCTAAGAGCGTGCCAATATTTTCTCTAACTTTACACTGGAATGGCACT
CATCACGCAGGTATTAATGATGATATCCGGGATATTGAAAGAGTCGTAAATACTGAGATA
GGTTTAGAGGAACGCAAGCACTGCACCCTTTCTACTCAAATAACAAAATTATTAGCCTGT
CTTGATATTCTATTGGAAACAAGCGATTCCCCAGAATTTCCACCAGACAAAGTTATACTT
CATCCAGTTAGAGGACGTAACAGGAGCAAGCCATATAAATTTGTAAACCAAGGTGTTGGT
GTCTTTGTACATCACTGAATTGAATAAATTTTACAACTCATCAAAAAAAAAAAA
(2394 bp)

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