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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp65734_c0_seq5
Scaffold_idBomo_Scaf111
NCBI non-redundant
(nr)		PREDICTED:_valine--tRNA_ligase_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004832 F valine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006438 P valyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
Transcript
Level		FPKM:0.27 TPM:0.48
ORF EntryO_BomoEE12202_complete:A_BomoEE_comp65734_c0_seq5
Sequence
(Nucleotide)
TTTTTTTGTTGCGTTTTTTTTTTTTTTTTTTAAATGGTTTTTTTTTTTTTTAAAAAAATT
GAACTGACAACTATATTTGTTTAACTTTATATTTAAAGATATTCTAGATCAGCCTCTGTA
ATTCCTTGAGTTCTTTCCTTTTGGCCATCAATTTTTCGTGATCGCGGACTTGCGTCCATT
CCGGTATTGTCGTTAAATAATTACTATTCGAATATTTTTCCTCCATATTATTCAAAGAGT
CTTCTAATTTCTTTATTCGTTTCTCCAATTTATTTTTCGCATTTGTTATAGCATTCTCTA
TATCGTCCCCGACTAATTCCACGTATATTTCTGTATTCAAATCCAGGATTCCTTTGACGT
AAGTTTTGTCATCTTTACCATTGAATGTTAAACCTTTCGCGCGTGTCAGATGTGTTATAA
TATCAACATTATCTTTCATAGCTTCTATTAGATTTTCATTATCCGTTCTCACATTAATTA
TAGGTCGAACTTTATTCGTAATACTGTATAGACCTTTCAATTCGCGTATTAAGTTAACCG
CGTTCAATATCTTTTCGGCTTGCTCTTCAATAATTTCGTTTTTCCATTCCACGTAATCTT
CAGTTTTTGGAAATGATAGAAATTTTTCGGATGCGTCTTTGAAATTTATTATTACATTCC
TTTCGAAATCCGGTATCGTTGGTATTAATTCTTGTGTTATGTAAACCATGAAGGGGTATA
AACACCTCAGAGACGTGTTCAAGACTGCGGACAACGTGTGCGCGTGAGCGTAGCCGATTC
TAACATTATCATTCTCGAATCCCGGTTTCGACGCCTCCAAATAAATATCGCAAAACTCAT
TGTAAATCAATGTTCTGATAGCTTTCGTTGCCACTTGGAAATCATATGAATCCATTGTAT
CGTTGACTTTTTGGACCATATTGGCCAATCTACTCAGAATCCATCTATCAAAAAAAGTCA
AATCCTGTTTGGTTATTTCAGAATCTATCACTTTCAATTTAGCGTACGACAACTGAGTGT
ATTTGATACTTTGCCATATCTTATTACAAAATAATTTGTTCGAGTGACAATAGCTGACAT
CAAAATTGACGAAATGCGATTTTATGTCTTGCGACAGTAATGTGAACCTTAACGCGTCTA
CCCCGCATTCTGGGATGCCATTAGTAGCTGAAAAATTAGCTTTGTGATACGAATATGCTT
TTTTAAGTTCATCCTTATTGAGAATACCACTTTTGTGCATCTCCTCGCTTTTCTTTTTGA
GGGCGTCAAGGCTTATCCCCTCGATTACGTCAATGGGGTCTATGACGTTTCCGCGGCTTT
TAGACATTTTAGCGCCTTTATTGTCGCAAACAATACCGTGCAACAGAACTTTTTCGAACG
GAACTTTGCCTGTTAATTCAAGGCCTAATATCACCATTCTGTGCACCCAAAACCCAAGGA
TGTCGTGACCCGTAGCTAACAGACTTAAAGGGTAGAATTCCGTATAGTCTCTACTAAAAT
CATGATCAGGCCAGCCTAAAGCTGCGAAAGGATAAATTCCCGATGAGAACCAGGTGTCTA
AGACATCTGTATCTCTTTCTACTTTAATCAAATCAGGTAAAGTATTAAAATGTTTAGAAG
CCTGCTGTTTGGCAGAGCTTTCATCGGTAGCAGCTACCCAAGTCAGCTCTTCATCAACAC
TGCACATATAAGCTGGTATTTGATGTCCCCACCATAGCTGTCGCGAAATGCACCAATCTC
TACCATCATCGGTCCAATTAAACCAATTTTGAATGAAATTTTCGGGTATTATTTTCAATT
TACGATTTTCAACACACTCTCTGGCCTTTTTATTCAATTCGGCGCAAGATAAGAACCATT
GTTCTTTAGGTAAATGATCAATTACGTTTCCTGATCGACTGCATATCGGTAATGTCATTA
TATGTGGTTTAATCTCTTTCATGAGACCTAAATCATCTAGTTTGTGAACTAATATGGACC
TACAGTCATAGCGTTTGAGTCCTTGAAATATTTCCGTGTTTTCTATCAATCCTTCCACAT
TTATAACTTGGAGTAAAGGCAAATTGTGTTGTTTAGCAACTTCATAATCTACTTTACTAT
GTGCGGGTGTGATTTTGACAGCCCCTGTACCAAATTCCCGATCAACGAATTTATCGAATA
TAATTGGTATTGTTTCATTCGTTCTGAATGGATGTATAACCCTTTTACCTTCCAAATGTT
GGTATCAAAACTCAATCACCTTTTGTCTTCTGGATGTACAGCTACTGCTACATCTCCCAG
CATCGTCTCTGGCATTGTTGTAGACACAATTATTTCCTCAGTGCTGTCATAAACTTTATA
CGCAAAATCATATATCAATCCAAACCTAACAGGCTTTATATAATTTGGCAGACTCAAATC
ACTAGGTTCATTTATTGGTACATTTTCCACTTCAATATCTGACACAGTTGATTTTAATGC
ATTGCACCAATTAACTAGTGCTTTTTTTCTATAAATAAGATTTTTATGGAATAATTGAAT
GAATGCTGTGTTCACGGCCTTGGTGTGTTTAGGATCCATTGTAAAAACTTGTCGGGACCA
GTCAAGTGAACAGCCCAAGGTTCGAAGCTGTTCTGTAATACTATCTCCATGTTTCTCCCG
CCATTTCCATACCTCTTCTACAAATTTTTCACGTCCAATGTCGTAGCGATTTATGTTTTC
TTTACTTTTTAAGTATTTTTCAACAATGCTCTGTGTAGCGATTCCTGCATGATCCGTTCC
AGGGAGCCATAAGACATTATAGCCTAATGATCTTTTTCTCCTAACTATTACGTCTTGTAT
CGTGCATGCTAATGCATGACCTAAATGCAATTTCCCTGTTACGTTAGGCGGCGGTAATAT
TATACTAAAATTATTCTTGTTACTACAATTTTCGGCTTCGAACAATCCTGCATTTTCCCA
TTTATCATATTTGTTTTTTTCAACAATTTCTGGTCTGTATGCAGCGGCGGGTAAATTTTC
TTTAACCAAAATATTTGTCGTAGATGTCGCTAATCTTTTACATGAATACACGCATGATTT
TTTATTTATTTTATATAGAATAAACATGGTATTCATTTATTTTTTATGTACATTTATTAT
TTTACAATCAAGTGTTCCTGCAGACAAGTGTTTAACCTATGCTGCAAATCCTGATGTTTT
GACAATTTTGACATAGTTTTTTAAAGGTGATCACAAAGAGTAAATAAGAGTATCTACATA
CCTAACAATAACAGCGATAGATAATACAATTTCCCTGCGCTGATTAGCTACAATATTTTT
TGTCAAGGCCGATAATAGTTCTAAACAGTGAGTGATGATATAATAATAAATACTGAAAAT
GGAAGAGGAAATTGAAGACTGCATAAGAAAGAAAATCCACTGGGCACAGTTACCTCAAAC
TGTGAGAAAGCTACTAGGTGACTCTCCGAAGGAATACGATAGACACATTTTTGAATTCAG
TATAAAAAACCAATTGAGATATAGAGGCAGTCTCGTTAGAACGGTTAAGAAAGACGAGAA
GAAATACTATGAGGTTCTTGTGCAAAACAGCATACAGAAGCTTATGCTCTACCCCTATCA
CTTAGCTGATATGATCGTTAAAGGTATGTAAAAAAGTATGTTGTATAGAAAAGGAGCTAT
TCCCAAAACTGAAAGGGCCATTAATAAAGAATTCTCTTCAAATCTGGAAAATGATAAAAC
GAGTTAAGTTCAGATATAGAGAAAAGGTAATTTTGCACAGTATAGTTCATTTTGGTGCTC
TTGCCTACAAGTCCTCTACAAGAGCATGCAATTTTATAGAGAACAGACCATCTAATATAT
ACTGCAGTTCAGAGTTGAATTATTACTTTTTACAGTCCATCATTAGTTACATAATTTTTG
AGCAGCTAAAAGATACATATATCTTGTTGAGTTTGAGAGAAAGGCATTGACCATGATGCA
ATAAACACTATGCCTTCTACAAAACCATTTTTTTCTCAATTTATTGTATTTCTGGTTAAT
CTTATCTACAGAAATTTTATGATATCAACATATGACTGTAATTCATTATAGAAAGATAAC
AATAATAAAAAGTCATTAGATTGAGTTATACAGCAAATTGGTTTACTAATATGATTAATG
AGACCTGTAGAAAATGATGTTGTATGTTCATAAAAAATCACCGTACTGGTTATTTCTGCC
TTGAAGGAATTATTCATTCTGGTCTAAAATGTTTGGCAGCCATTGTTCTAAAAAAAAAAG
AGACTTCAATTTCATTTCTCTGGCTCTATCTCATTTGCTGCTTCCATTTTATATGTCAGT
ACTGGCAAATGTATGTGTCCACATGAAATCAGGTGATTAGTTAATATGGTAATCTTAGTT
TAAGTACAAATGATTAATTTTAATGAATGATTCGTTCCTTTAGGATTAAGGATAACCCCA
TTTATTTATTATGTAGAAGTGGTGGCACTTCTGATTGAGTTGGAGAAAAGCTACGATACA
ATGCCTAATTTTACAGCAGCTGACTGTCTCCGCCTATTAGGCATAGGTCGTAATGAATAT
CTGGAATTAGTAGCTAAAGCTAGGTCACTGGGCCGCCGAGGCAGATCAAAAGCTATTCGT
TCTTTACTGCCACGAGTACCACAGAACGTTCCGATGCAGCCGTGGTGGAGAATCGAACTG
GGCTACGTACTGGAGGAAGACGTTAAGCCGCTGAGTGAGAGTGAAGTGGCCGTCATTGAC
GTACTGATAGATCGAGGGTCACAGACTGCAGGTACACTCGACTATAACATCGTTAAGAGC
CTGTACAGACGGGGTCTGGTGTACGTGGACGTGCCCATAACGGCGGCTGATAAGGTGTCC
GTCCCTCCGTTGAAGGGCTTCGTCATGAACCGTGTGGCCGGGGACTACTTCGAGACCTTG
CTGTACAAGGTGTTCGTTTCCATCGACGAGCACACCGGGGTCGGGGAACTTGCTGCCGTC
CTCCAGGTTGACTGCGAGCTGGTGAAGCAAGCGGTGTCGCTGTACTGCCGGCTTGGGTTC
GCGAACAACCTGCACCCCCCGCCCGTCTCCCCGCCGCACCCCTCCTGGAGCGACGCGGTC
ACGACACACACCCATCCGCCGTACCGACAAATAACACCTTTGACCTTTGACCCGGGAGTC
GATGAGGAAACTCTGCAAATGGAACCGGTGCTTCTGAAAGACGCCCCATCTACTTCCAAA
CAGATGCATGAAACTCCTGAGGGATCCGGGGGCGGTGGCCGTCGGGTAGCCGTGCTGTTT
GACTCGACACTCGCCGCGTATCTGATGATGGGCAATCTGTCACCGGATCTAAAAAGTCAC
GCCGTGACTCTATTCGAAGTCGGAAAGCTGAGCGACGAAAGCTTGGACAGCCTGCTGTTG
GAACTAGACAAGGTCGTAGCAGATCCAGAGATAGAGGGCGAAGCCCGGCGGTACTTGGCG
GCGGCGGCGTGTCTCCGGACTGCACTGCGGGTGCTCCGCCCCAAGCTGAGGCCCCTCGAC
CTGCTGCGGTGCGAAGCGTTGCACGCCCTAGGACATCAGTCCAGGACCAGGCTCCTCGCT
ACTAAGTACAGGGCAGCTATAGCCACAGCGCCGCTGTGCCGCGAGGCGC
(5629 bp)

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