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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp65734_c0_seq2
Scaffold_idBomo_Scaf111
NCBI non-redundant
(nr)		PREDICTED:_valine--tRNA_ligase_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004832 F valine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006438 P valyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
Transcript
Level		FPKM:0.59 TPM:1.03
ORF EntryO_BomoEE12192_complete:A_BomoEE_comp65734_c0_seq2
Sequence
(Nucleotide)
TTTTTTTGTTGCGTTTTTTTTTTTTTTTTTTAAATGGTTTTTTTTTTTTTTAAAAAAATT
GAACTGACAACTATATTTGTTTAACTTTATATTTAAAGATATTCTAGATCAGCCTCTGTA
ATTCCTTGAGTTCTTTCCTTTTGGCCATCAATTTTTCGTGATCGCGGACTTGCGTCCATT
CCGGTATTGTCGTTAAATAATTACTATTCGAATATTTTTCCTCCATATTATTCAAAGAGT
CTTCTAATTTCTTTATTCGTTTCTCCAATTTATTTTTCGCATTTGTTATAGCATTCTCTA
TATCGTCCCCGACTAATTCCACGTATATTTCTGTATTCAAATCCAGGATTCCTTTGACGT
AAGTTTTGTCATCTTTACCATTGAATGTTAAACCTTTCGCGCGTGTCAGATGTGTTATAA
TATCAACATTATCTTTCATAGCTTCTATTAGATTTTCATTATCCGTTCTCACATTAATTA
TAGGTCGAACTTTATTCGTAATACTGTATAGACCTTTCAATTCGCGTATTAAGTTAACCG
CGTTCAATATCTTTTCGGCTTGCTCTTCAATAATTTCGTTTTTCCATTCCACGTAATCTT
CAGTTTTTGGAAATGATAGAAATTTTTCGGATGCGTCTTTGAAATTTATTATTACATTCC
TTTCGAAATCCGGTATCGTTGGTATTAATTCTTGTGTTATGTAAACCATGAAGGGGTATA
AACACCTCAGAGACGTGTTCAAGACTGCGGACAACGTGTGCGCGTGAGCGTAGCCGATTC
TAACATTATCATTCTCGAATCCCGGTTTCGACGCCTCCAAATAAATATCGCAAAACTCAT
TGTAAATCAATGTTCTGATAGCTTTCGTTGCCACTTGGAAATCATATGAATCCATTGTAT
CGTTGACTTTTTGGACCATATTGGCCAATCTACTCAGAATCCATCTATCAAAAAAAGTCA
AATCCTGTTTGGTTATTTCAGAATCTATCACTTTCAATTTAGCGTACGACAACTGAGTGT
ATTTGATACTTTGCCATATCTTATTACAAAATAATTTGTTCGAGTGACAATAGCTGACAT
CAAAATTGACGAAATGCGATTTTATGTCTTGCGACAGTAATGTGAACCTTAACGCGTCTA
CCCCGCATTCTGGGATGCCATTAGTAGCTGAAAAATTAGCTTTGTGATACGAATATGCTT
TTTTAAGTTCATCCTTATTGAGAATACCACTTTTGTGCATCTCCTCGCTTTTCTTTTTGA
GGGCGTCAAGGCTTATCCCCTCGATTACGTCAATGGGGTCTATGACGTTTCCGCGGCTTT
TAGACATTTTAGCGCCTTTATTGTCGCAAACAATACCGTGCAACAGAACTTTTTCGAACG
GAACTTTGCCTGTTAATTCAAGGCCTAATATCACCATTCTGTGCACCCAAAACCCAAGGA
TGTCGTGACCCGTAGCTAACAGACTTAAAGGGTAGAATTCCGTATAGTCTCTACTAAAAT
CATGATCAGGCCAGCCTAAAGCTGCGAAAGGATAAATTCCCGATGAGAACCAGGTGTCTA
AGACATCTGTATCTCTTTCTACTTTAATCAAATCAGGTAAAGTATTAAAATGTTTAGAAG
CCTGCTGTTTGGCAGAGCTTTCATCGGTAGCAGCTACCCAAGTCAGCTCTTCATCAACAC
TGCACATATAAGCTGGTATTTGATGTCCCCACCATAGCTGTCGCGAAATGCACCAATCTC
TACCATCATCGGTCCAATTAAACCAATTTTGAATGAAATTTTCGGGTATTATTTTCAATT
TACGATTTTCAACACACTCTCTGGCCTTTTTATTCAATTCGGCGCAAGATAAGAACCATT
GTTCTTTAGGTAAATGATCAATTACGTTTCCTGATCGACTGCATATCGGTAATGTCATTA
TATGTGGTTTAATCTCTTTCATGAGACCTAAATCATCTAGTTTGTGAACTAATATGGACC
TACAGTCATAGCGTTTGAGTCCTTGAAATATTTCCGTGTTTTCTATCAATCCTTCCACAT
TTATAACTTGGAGTAAAGGCAAATTGTGTTGTTTAGCAACTTCATAATCTACTTTACTAT
GTGCGGGTGTGATTTTGACAGCCCCTGTACCAAATTCCCGATCAACGAATTTATCGAATA
TAATTGGTATTGTTTCATTCGTTCTGAATGGATGTATAACCCTTTTACCTTCCAAATGTT
GGTATCTTTTGTCTTCTGGATGTACAGCTACTGCTACATCTCCCAGCATCGTCTCTGGCA
TTGTTGTAGACACAATTATTTCCTCAGTGCTGTCATAAACTTTATACGCAAAATCATATA
TCAATCCAAACCTAACAGGCTTTATATAATTTGGCAGACTCAAATCACTAGGTTCATTTA
TTGGTACATTTTCCACTTCAATATCTGACACAGTTGATTTTAATGCATTGCACCAATTAA
CTAGTGCTTTTTTTCTATAAATAAGATTTTTATGGAATAATTGAATGAATGCTGTGTTCA
CGGCCTTGGTGTGTTTAGGATCCATTGTAAAAACTTGTCGGGACCAGTCAAGTGAACAGC
CCAAGGTTCGAAGCTGTTCTGTAATACTATCTCCATGTTTCTCCCGCCATTTCCATACCT
CTTCTACAAATTTTTCACGTCCAATGTCGTAGCGATTTATGTTTTCTTTACTTTTTAAGT
ATTTTTCAACAATGCTCTGTGTAGCGATTCCTGCATGATCCGTTCCAGGGAGCCATAAGA
CATTATAGCCTAATGATCTTTTTCTCCTAACTATTACGTCTTGTATCGTGCATGCTAATG
CATGACCTAAATGCAATTTCCCTGTTACGTTAGGCGGCGGTAATATTATACTAAAATTAT
TCTTGTTACTACAATTTTCGGCTTCGAACAATCCTGCATTTTCCCATTTATCATATTTGT
TTTTTTCAACAATTTCTGGTCTGTATGCAGCGGCGGGTAAATTTTCTTTAACCAAAATAT
TTGTCGTAGATGTCGCTAATCTTTTACATGAATACACGCATGATTTTTTATTTATTTTAT
ATAGAATAAACATGGTATTCATTTATTTTTTATGTACATTTATTATTTTACAATCAAGTG
TTCCTGCAGACAAGTGTTTAACCTATGCTGCAAATCCTGATGTTTTGACAATTTTGACAT
AGTTTTTTAAAGGTGATCACAAAGAGTAAATAAGAGTATCTACATACCTAACAATAACAG
CGATAGATAATACAATTTCCCTGCGCTGATTAGCTACAATATTTTTTGTCAAGGCCGATA
ATAGTTCTAAACAGTGAGTGATGATATAATAATAAATACTGAAAATGGAAGAGGAAATTG
AAGACTGCATAAGAAAGAAAATCCACTGGGCACAGTTACCTCAAACTGTGAGAAAGCTAC
TAGGTGACTCTCCGAAGGAATACGATAGACACATTTTTGAATTCAGTATAAAAAACCAAT
TGAGATATAGAGGCAGTCTCGTTAGAACGGTTAAGAAAGACGAGAAGAAATACTATGAGG
TTCTTGTGCAAAACAGCATACAGAAGCTTATGCTCTACCCCTATCACTTAGCTGATATGA
TCGTTAAAGGTATGTAAAAAAGTATGTTGTATAGAAAAGGAGCTATTCCCAAAACTGAAA
GGGCCATTAATAAAGAATTCTCTTCAAATCTGGAAAATGATAAAACGAGTTAAGTTCAGA
TATAGAGAAAAGGTAATTTTGCACAGTATAGTTCATTTTGGTGCTCTTGCCTACAAGTCC
TCTACAAGAGCATGCAATTTTATAGAGAACAGACCATCTAATATATACTGCAGTTCAGAG
TTGAATTATTACTTTTTACAGTCCATCATTAGTTACATAATTTTTGAGCAGCTAAAAGAT
ACATATATCTTGTTGAGTTTGAGAGAAAGGCATTGACCATGATGCAATAAACACTATGCC
TTCTACAAAACCATTTTTTTCTCAATTTATTGTATTTCTGGTTAATCTTATCTACAGAAA
TTTTATGATATCAACATATGACTGTAATTCATTATAGAAAGATAACAATAATAAAAAGTC
ATTAGATTGAGTTATACAGCAAATTGGTTTACTAATATGATTAATGAGACCTGTAGAAAA
TGATGTTGTATGTTCATAAAAAATCACCGTACTGGTTATTTCTGCCTTGAAGGAATTATT
CATTCTGGTCTAAAATGTTTGGCAGCCATTGTTCTAAAAAAAAAAGAGACTTCAATTTCA
TTTCTCTGGCTCTATCTCATTTGCTGCTTCCATTTTATATGTCAGTACTGGCAAATGTAT
GTGTCCACATGAAATCAGGTGATTAGTTAATATGGTAATCTTAGTTTAAGTACAAATGAT
TAATTTTAATGAATGATTCGTTCCTTTAGGATTAAGGATAACCCCATTTATTTATTATGT
AGAAGTGGTGGCACTTCTGATTGAGTTGGAGAAAAGCTACGATACAATGCCTAATTTTAC
AGCAGCTGACTGTCTCCGCCTATTAGGCATAGGTCGTAATGAATATCTGGAATTAGTAGC
TAAAGCTAGGTCACTGGGCCGCCGAGGCAGATCAAAAGCTATTCGTTCTTTACTGCCACG
AGTACCACAGAACGTTCCGATGCAGCCGTGGTGGAGAATCGAACTGGGCTACGTACTGGA
GGAAGACGTTAAGCCGCTGAGTGAGAGTGAAGTGGCCGTCATTGACGTACTGATAGATCG
AGGGTCACAGACTGCAGGTACACTCGACTATAACATCGTTAAGAGCCTGTACAGACGGGG
TCTGGTGTACGTGGACGTGCCCATAACGGCGGCTGATAAGGTGTCCGTCCCTCCGTTGAA
GGGCTTCGTCATGAACCGTGTGGCCGGGGACTACTTCGAGACCTTGCTGTACAAGGTGTT
CGTTTCCATCGACGAGCACACCGGGGTCGGGGAACTTGCTGCCGTCCTCCAGGTTGACTG
CGAGCTGGTGAAGCAAGCGGTGTCGCTGTACTGCCGGCTTGGGTTCGCGAACAACCTGCA
CCCCCCGCCCGTCTCCCCGCCGCACCCCTCCTGGAGCGACGCGGTCACGACACACACCCA
TCCGCCGTACCGACAAATAACACCTTTGACCTTTGACCCGGGAGTCGATGAGGAAACTCT
GCAAATGGAACCGGTGCTTCTGAAAGACGCCCCATCTACTTCCAAACAGATGCATGAAAC
TCCTGAGGGATCCGGGGGCGGTGGCCGTCGGGTAGCCGTGCTGTTTGACTCGACACTCGC
CGCGTATCTGATGATGGGCAATCTGTCACCGGATCTAAAAAGTCACGCCGTGACTCTATT
CGAAGTCGGAAAGCTGAGCGACGAAAGCTTGGACAGCCTGCTGTTGGAACTAGACAAGGT
CGTAGCAGATCCAGAGATAGAGGGCGAAGCCCGGCGGTACTTGGCGGCGGCGGCGTGTCT
CCGGACTGCACTGCGGGTGCTCCGCCCCAAGCTGAGGCCCCTCGACCTGCTGCGGTGCGA
AGCGTTGCACGCCCTAGGACATCAGTCCAGGACCAGGCTCCTCGCTACTAAGTACAGGGC
AGCTATAGCCACAGCGCCGCTGTGCCGCGAGGCGC
(5615 bp)

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