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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp65633_c0_seq4
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		PREDICTED:_pre-mRNA_cleavage_complex_2_protein_Pcf11-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0000993 F RNA polymerase II complex binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005849 C mRNA cleavage factor complex
GO:0006369 P termination of RNA polymerase II transcription
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0031124 P mRNA 3'-end processing
Transcript
Level		FPKM:21.94 TPM:38.26
ORF EntryO_BomoEE12034_complete:A_BomoEE_comp65633_c0_seq4
Sequence
(Nucleotide)
GCGGGCGCGCGCGCCAAGCGGGGGTCGCGGCGCATGGCGGCCAGCCCCGCGCTCACGGGC
GCTATCCGACTGCCCGTTTTGTTTATTGGCGGTCCGAGCCTCTGTCTGACAGGTACAGGG
GTGACCTCTGGCGCAGCGACGGAGACCAGCGGAGTCGCGGCGGGGGCGACGGGCGCAGTC
GCTGCGGCCACCACGGGAGGGACTGCTGTCACCACCTTTTTAGCATTCTTCTCAGCTACC
TCAAGCTGCTTCCGTGTCTGCTCCAATTCCAACTCAATCTTTTTCTTTTGTAGCATGAGC
AGCTCCTGCTCTTTCTTAGCGATGATGGTTCGTTCTTCGTCAGTCAACACCGGTGTGGAA
GCCGGTGGCTTTTTCAGAAAATTTGGATTTACATGGATGTTTGATTGCTGGGGTTGGGCC
TGTATCGGCCATGCTGGATCAATGAGGTTGACTTTGACATCTAGCTGGTACAGCTTCGTC
GCTGGGAACACATCGTGCCAAGTCTCACGAAGTTTGAACATTTGTGACCGTATTTTCTCA
TCAACCTGCTTAAAAGTCCTTGTAAACATGTTGACGATACTCTGTGAGAATTTTTGTGTG
TAGGCTCCGCCAACATTCTTGATAATTGAATCAACTAAATACAGAACTGGCAACTTGATA
TCGGGATGCACCTGTGTGGAGGAAAAATGATTTCTATTCTATGTGTACTGGTGGCTGGAA
GTAAAGGACATTCCTAGGTTCACAGGTACTGAATGGAATGGGTTACAATAATACAAATTT
TAATTTGAATATTTTAATTCAAAACAAATTAGAAAATAAATCAGAAATCAGTTTCAAAAT
GCTTTATTTCGAACATTCACAGGTGATACATAACTGAAATAATAATTGTTTTCAGATTAG
ATACCATTATTGGTATATTAATTTATGTAACTGGTCATTAAACAGGCATCTCCCGGAAGA
TGAAAGATCAACAAGAGAATCAAGGGATTCAATATGTGGTGCTCTATGAAATGGATCTAA
GCTAAGTCCTATTCAACAGCAAAAAATTTGGAATATACACAATCGTCCTGTAGAAATAAA
AAAAACTACTAACTACATATATTTGTGTTTCACAATGGCTGCCTTAAACAACAGAGCTGC
ATGCTCAATTGCACTATTGTCAAACTACTTATATTTTCCTATAGAAATGGCAAACTTTTC
TCATACCTCATAGATTCATAAATTGCTACAAAATTTTATGAAAGGATAACATGATCAAAA
ACAAATTCCTCAAAGTTTATCAGCAGTATTAATAGCTCATATACATATGTGAAGATTTCT
CATGCAAAATATTGTTGACTCAATTGAAATGTGATTTCTAAAGTCACAAAACCTTAGTAA
TAAAAGTGGTTCTCTAGTTCTTTTTGACAATGTAAAAGATTATACAAAAAGAAAAACGTG
TGCATGATATTATACATATGAATGTTTAAGGTATATATTATAATTCAATCACATATTATA
ATTTTTTTATCATTAGACATTTCCTTCTACTCTAAGTAATATATTTTCTCTCATAAACAT
AACTTCTGTAGTGCATATCCACATTAAATTTCCCTATTCCTATATTTTATATTACGATAC
AAATGCTTTCCAACTAATAAAATAAAAATTTTAAAGAGATATATCAAAATGTTTGAGTAA
ATTTTGTTGTAGTGAATTCAAGATTGCACTTGAATGACATATGTTTGCCTTTTGTGAATA
ATTGCCATAATTTAATACAGGAAAGCAAATGTTTCAAATGAGTTTATTCCTTAAGTACAT
ATAAGTGCTGGGAAAATCTATCATTCTGTTCAAACGTTTAAAGAGGCCCCTTTATGTTTA
CATATTCCTCAACACTTGATAAGACAAAATTTTTATACTGAGCTTCTTTTAATAACTTTA
AATTATAAAATATTAATTTGTGTTTCTGAAAATTAACACAGGCACATGAACCAATTTCCT
TTCTTAAGAAATTCACTTAAGAAGTCTAGAGTTTATAGTGTAGTTATAACTTTTTTACTA
AGTCCAGGTCCGGTTTTAATGTAATTTTAATTGTTTAATAGGAATTACCTTCCTTACAAA
ATAAATTTAGAAGGAAATATATCTAATCGAATGCGTGGTAATAAGTGAAAATTTCTAGAA
TACTTATTGGGAGATGCCTGCTCGTGTTTAACTGGTTACAAACGAGGTTTGACGAAACTT
AACAGGTGTCACCATTCCTTATCACAACTGGTGTGCGTCAACACCGACCACTTTCTCTAA
TATAGTGAACGTGTGGACAATAACTCTTCAAGAGTGTATTTTTTGTTAAAAATGGAAATT
CACCTTCTCCAAATGCTTTTCCACGGTTTCAACGATAACCCCAGCGTGTTCGATATTCTC
TTCCGCAAGAATTGTGAGCATATTTATCAATGGCTTGCTGTTGACGGTCAGATCCGCCAA
ACTGGACGCATATTCCTCGGAGATTTCTTTCGACATGATGCACGGCCGCCCACGATGGCA
TGCCAAACACGAACTTTTAGCATCAACTGCACATCAGTTGTTAAATATAACACGAACTGT
TCAACGATAAAGCACTGTAATGTTAGCCACGGCACGTTCTTAGATACGCAATATACAAAT
AACACACCAATCTGACGCGTAATTTTGTTTAACGCGCTGCAGACTTTTTCAGTTATCGAG
AGTAAACGTTGCCACTCAGATAGTCGAACACGAAATGGTGGACACTGGACAGTAGATTAA
GTGGGTGTCAAAAAAGAATGAAATAGAATGGAATGAACTGATTTTTTAAGAAATTTTATG
ACCT
(2824 bp)

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