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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp65633_c0_seq3
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		PREDICTED:_pre-mRNA_cleavage_complex_2_protein_Pcf11-like_isoform_X2_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0000993 F RNA polymerase II complex binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005849 C mRNA cleavage factor complex
GO:0006369 P termination of RNA polymerase II transcription
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0031124 P mRNA 3'-end processing
Transcript
Level		FPKM:5.20 TPM:9.06
ORF EntryO_BomoEE12031_complete:A_BomoEE_comp65633_c0_seq3
Sequence
(Nucleotide)
GCGGGCGCGCGCGCCAAGCGGGGGTCGCGGCGCATGGCGGCCAGCCCCGCGCTCACGGGC
GCTATCCGACTGCCCGTTTTGTTTATTGGCGGTCCGAGCCTCTGTCTGACAGGTACAGGG
GTGACCTCTGGCGCAGCGACGGAGACCAGCGGAGTCGCGGCGGGGGCGACGGGCGCAGTC
GCTGCGGCCACCACGGGAGGGACTGCTGTCACCACCTTTTTAGCATTCTTCTCAGCTACC
TCAAGCTGCTTCCGTGTCTGCTCCAATTCCAACTCAATCTTTTTCTTTTGTAGCATGAGC
AGCTCCTGCTCTTTCTTAGCGATGATGGTTCGTTCTTCGTCAGTCAACACCGGTGTGGAA
GCCGGTGGATGGATGTTTGATTGCTGGGGTTGGGCCTGTATCGGCCATGCTGGATCAATG
AGGTTGACTTTGACATCTAGCTGGTACAGCTTCGTCGCTGGGAACACATCGTGCCAAGTC
TCACGAAGTTTGAACATTTGTGACCGTATTTTCTCATCAACCTGCTTAAAAGTCCTTGTA
AACATGTTGACGATACTCTGTGAGAATTTTTGTGTGTAGGCTCCGCCAACATTCTTGATA
ATTGAATCAACTAAATACAGAACTGGCAACTTGATATCGGGATGCACCTGTGTGGAGGAA
AAATGATTTCTATTCTATGTGTACTGGTGGCTGGAAGTAAAGGACATTCCTAGGTTCACA
GGTACTGAATGGAATGGGTTACAATAATACAAATTTTAATTTGAATATTTTAATTCAAAA
CAAATTAGAAAATAAATCAGAAATCAGTTTCAAAATGCTTTATTTCGAACATTCACAGGT
GATACATAACTGAAATAATAATTGTTTTCAGATTAGATACCATTATTGGTATATTAATTT
ATGTAACTGGTCATTAAACAGGCATCTCCCGGAAGATGAAAGATCAACAAGAGAATCAAG
GGATTCAATATGTGGTGCTCTATGAAATGGATCTAAGCTAAGTCCTATTCAACAGCAAAA
AATTTGGAATATACACAATCGTCCTGTAGAAATAAAAAAAACTACTAACTACATATATTT
GTGTTTCACAATGGCTGCCTTAAACAACAGAGCTGCATGCTCAATTGCACTATTGTCAAA
CTACTTATATTTTCCTATAGAAATGGCAAACTTTTCTCATACCTCATAGATTCATAAATT
GCTACAAAATTTTATGAAAGGATAACATGATCAAAAACAAATTCCTCAAAGTTTATCAGC
AGTATTAATAGCTCATATACATATGTGAAGATTTCTCATGCAAAATATTGTTGACTCAAT
TGAAATGTGATTTCTAAAGTCACAAAACCTTAGTAATAAAAGTGGTTCTCTAGTTCTTTT
TGACAATGTAAAAGATTATACAAAAAGAAAAACGTGTGCATGATATTATACATATGAATG
TTTAAGGTATATATTATAATTCAATCACATATTATAATTTTTTTATCATTAGACATTTCC
TTCTACTCTAAGTAATATATTTTCTCTCATAAACATAACTTCTGTAGTGCATATCCACAT
TAAATTTCCCTATTCCTATATTTTATATTACGATACAAATGCTTTCCAACTAATAAAATA
AAAATTTTAAAGAGATATATCAAAATGTTTGAGTAAATTTTGTTGTAGTGAATTCAAGAT
TGCACTTGAATGACATATGTTTGCCTTTTGTGAATAATTGCCATAATTTAATACAGGAAA
GCAAATGTTTCAAATGAGTTTATTCCTTAAGTACATATAAGTGCTGGGAAAATCTATCAT
TCTGTTCAAACGTTTAAAGAGGCCCCTTTATGTTTACATATTCCTCAACACTTGATAAGA
CAAAATTTTTATACTGAGCTTCTTTTAATAACTTTAAATTATAAAATATTAATTTGTGTT
TCTGAAAATTAACACAGGCACATGAACCAATTTCCTTTCTTAAGAAATTCACTTAAGAAG
TCTAGAGTTTATAGTGTAGTTATAACTTTTTTACTAAGTCCAGGTCCGGTTTTAATGTAA
TTTTAATTGTTTAATAGGAATTACCTTCCTTACAAAATAAATTTAGAAGGAAATATATCT
AATCGAATGCGTGGTAATAAGTGAAAATTTCTAGAATACTTATTGGGAGATGCCTGCTCG
TGTTTAACTGGTTACAAACGAGGTTTGACGAAACTTAACAGGTGTCACCATTCCTTATCA
CAACTGGTGTGCGTCAACACCGACCACTTTCTCTAATATAGTGAACGTGTGGACAATAAC
TCTTCAAGAGTGTATTTTTTGTTAAAAATGGAAATTCACCTTCTCCAAATGCTTTTCCAC
GGTTTCAACGATAACCCCAGCGTGTTCGATATTCTCTTCCGCAAGAATTGTGAGCATATT
TATCAATGGCTTGCTGTTGACGGTCAGATCCGCCAAACTGGACGCATATTCCTCGGAGAT
TTCTTTCGACATGATGCACGGCCGCCCACGATGGCATGCCAAACACGAACTTTTAGCATC
AACTGCACATCAGTTGTTAAATATAACACGAACTGTTCAACGATAAAGCACTGTAATGTT
AGCCACGGCACGTTCTTAGATACGCAATATACAAATAACACACCAATCTGACGCGTAATT
TTGTTTAACGCGCTGCAGACTTTTTCAGTTATCGAGAGTAAACGTTGCCACTCAGATAGT
CGAACACGAAATGGTGGACACTGGACAGTAGATTAAGTGGGTGTCAAAAAAGAATGAAAT
AGAATGGAATGAACTGATTTTTTAAGAAATTTTATGACCT
(2800 bp)

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