SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp65633_c0_seq1
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		PREDICTED:_pre-mRNA_cleavage_complex_2_protein_Pcf11-like_isoform_X1_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0000993 F RNA polymerase II complex binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005849 C mRNA cleavage factor complex
GO:0006369 P termination of RNA polymerase II transcription
GO:0006378 P mRNA polyadenylation
GO:0006379 P mRNA cleavage
GO:0006397 P mRNA processing
GO:0031124 P mRNA 3'-end processing
Transcript
Level		FPKM:11.51 TPM:20.08
ORF EntryO_BomoEE12025_complete:A_BomoEE_comp65633_c0_seq1
Sequence
(Nucleotide)
GCGGGCGCGCGCGCCAAGCGGGGGTCGCGGCGCATGGCGGCCAGCCCCGCGCTCACGGGC
GCTATCCGACTGCCCGTTTTGTTTATTGGCGGTCCGAGCCTCTGTCTGACAGGTACAGGG
GTGACCTCTGGCGCAGCGACGGAGACCAGCGGAGTCGCGGCGGGGGCGACGGGCGCAGTC
GCTGCGGCCACCACGGGAGGGACTGCTGTCACCACCTTTTTAGCATTCTTCTCAGCTACC
TCAAGCTGCTTCCGTGTCTGCTCCAATTCCAACTCAATCTTTTTCTTTTGTAGCATGAGC
AGCTCCTGCTCTTTCTTAGCGATGATGGTTCGTTCTTCGTCAGTCAACACCGGTGTGGAA
GCCGGTGGCTTTTTCAGAAAATTTGGATTTACATGGATGTTTGATTGCTGGGGTTGGGCC
TGTATCGGCCATGCTGGATCAATGAGGTTGACTTTGACATCTAGCTGGTACAGCTTCGTC
GCTGGGAACACATCGTGCCAAGTCTCACGAAGTTTGAACATTTGTGACCGTATTTTCTCA
TCAACCTGCTTAAAAGTCCTTGTAAACATGTTGACGATACTCTGTGAGAATTTTTGTGTG
TAGGCTCCGCCAACATTCTTGATAATTGAATCAACTAAATACAGAACTGGCAACTTGATA
TCGGGATGCACCTTCTCCAAATGCTTTTCCACGGTTTCAACGATAACCCCAGCGTGTTCG
ATATTCTCTTCCGCAAGAATTGTGAGCATATTTATCAATGGCTTGCTGTTGACGGTCAGA
TCCGCCAAACTGGACGCATATTCCTCGGAGATTTCTTTCGACATGATGCACGGCCGCCCA
CGATGGCATGCCAAACACGAACTTTTAGCATCAACTGCACATCAGTTGTTAAATATAACA
CGAACTGTTCAACGATAAAGCACTGTAATGTTAGCCACGGCACGTTCTTAGATACGCAAT
ATACAAATAACACACCAATCTGACGCGTAATTTTGTTTAACGCGCTGCAGACTTTTTCAG
TTATCGAGAGTAAACGTTGCCACTCAGATAGTCGAACACGAAATGGTGGACACTGGACAG
TAGATTAAGTGGGTGTCAAAAAAGAATGAAATAGAATGGAATGAACTGATTTTTTAAGAA
ATTTTATGACCT
(1152 bp)

- SilkBase 1999-2023 -