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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp65557_c0_seq2
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		PREDICTED:_DNA_polymerase_epsilon_catalytic_subunit_A_[Amyelois_transitella]
Ontology
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0000731 P DNA synthesis involved in DNA repair
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005886 C plasma membrane
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006287 P base-excision repair, gap-filling
GO:0006297 P nucleotide-excision repair, DNA gap filling
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0008408 F 3'-5' exonuclease activity
GO:0008622 C epsilon DNA polymerase complex
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:6.13 TPM:10.69
ORF EntryO_BomoEE11954_5prime_partial:A_BomoEE_comp65557_c0_seq2
Sequence
(Nucleotide)
CCGCGGCCCAGCGCCGCCTGCAGCCCGCGGCACAGCGCGCGCGTCGAGCTCTCCACCACC
ACCTCCCACGACAACTCAGGGCCCGGCAGCGTGTTCTCGTCTGTCCCTTGATTTATTTTA
GCTGTCCTTTCGGCTGCGTAAAGGGTGCTCATGTTAGGTACTTGATTGGTCTTGACCGTG
TCCTGTACGAAAATATATCCTTTTTTCAGAGGACCCAGTATCAATGCCCACATACTGCGA
CTGGAATTCACAGACGAATGCTGGTACAGGAATATGTGTTTAATCGGAAACTGTCCATCC
TGCTTCGGTAAGTAAGGTTGATGTGCGACACTCTTGAACTGTAGTTGATTCAACGTAAAC
GAATCCATATTGTTTGAACCGAACTGTATCATTCGTCTCGCCTCTTGCGGCTCCACAGCG
CAGATACATCCGAGTTGTACCAGAATCCTGAACTCTAAGCTCATCTGTGTCTCGTAAATA
CCTTCTATTTCCGGAGCCGATAATTCACCCATGAGCTCTTCCTGATGTTCCCTGTAGAGC
TGTTCGGGCACGGAGTACTGGTAGAGGTGCAGCACGGGGTGCGCGCGGGGCAGCAGGCGG
CTGCAGCGGCGCCAGTAGCGGCCGCTGTCGGCGCCGCGGCACACGCGCTGGTTCACGTAG
AACACGCGCGGCACCGACACCTTCACCTGGTGCAGCTCGGCGCCCACCAGCGCCCACACC
TTGAACAGCCCCGGCTCGGCTGTTTCCGCTACCTGTATAATTTGCCATGGTGTATTCAAC
AAGGTGCGCTGTGCTCTCCTGATAAAACTACCTAACGTGGCGGCCGGCCCGGAACTCCTC
GGCGGCGGCATTATGTCACTGTCAATTTTACCTCGTTTGTTTCGATTTCTTAAGCCACGT
TGCTCCATTTGCCACAGCCATTTTCTTTTTTGAAACAAAATCCAATTTCTTCGTTCTTCC
TTAGTATTTCCGAAAGGCGGCGGAGGTCCCAGCGCCTCTCTCCACGTGGCGGCGGCGTCT
TGAGGCGGAGATTCAGTCCGCTTCCTCTTCATAGTGTGCACTACCGGACGAATTATTGTG
GCCCTCCCTGTCTTGTCATTGCCAATGTCTTCCATGTCCATTTCTGTGTTCGAGGTATCA
GCACCAGCGGCTTCCTCCGCGTCTTCCTCCACGGTGCGTAGTTCCCTGGGCTGCGCGCTG
AACATGTCCGTGATCTTCCTCGTTTTGTACTTATCCGTTTTGGCGAGCATCTTCTTGTGC
AACCAATCCGGGTACTGTACCCGGGGCACCGGATTGTCCAAGCCTTGCATGGCGGCCGGT
ATGGTGATGATCTTCTGTATGGCCCCGCTGAGCCTCTCGATGTAGTAGGCCCAGTCCAGC
ACGTCGCGGATGTCGATGTGCTCGGAGACGCTGGAGTCCTTGAGCCAGCGCCGCAGGTGG
TGCCGCTTCACGGCGGCCGGCGACTGGAAGATGGCGAGCGGGATCGCTCGTTCCGTCACC
GGAGCACCCTCGGGCTTCTTCGATATTATGAATCTGCAAGCCAAGCCGGCGTCCTTGACC
ATCTGATCACCGAGGAACTCGGCCAGTCTCTTGGCGGTCGATATCGACGTAGACTTCTGT
CCGCCGTAATCCTCCAGCTTCTTGGACATGGAACGGTTCTCCGATATCAACTCGAAGAGT
TCGGCGTCGGGCATGTTGGAGCCCCGGCTGTACAGCACGTCCAGCCAATAGTCCGCGACC
CGGGCCACGGCGCCGTAGCACGACTTCAGATCGTTACCTTTGAGGAAGGCCTCGAATACG
GAAGATTGAAATATTTTGATGAGTTGCAGTTCGCCGCGACGTTTTACTTCGAAACCTTTT
AATTCAGCTAATGACCCGTCAAAATTGAAGACGGCATAACGCTTCTTCAACCTTTTGCCT
TCTTCTTTAGAAGCCGGCAACACCATGGCCAAGTAAGGGCCGTCCACTTCAAAGAATATC
GAGTTTTCCGAGCGCTGCTCGTATCTCTTCTGTTCCGGATCCACGAGTTCGAAGTACTGG
TCGTTTGTAAAATGATCCTTAACCATTGCATTGAGTACAGCGTTAGGGAAGGAAACATTA
ATCTTCTTTTTCTTCGGATGATTCGTGTGGATGGTCACGTTTTCTGGGAACGATGACGGT
AATATGCACCAGATACCGTCAGTATCCAACTCGAGCGGTCTGCCAACTTGTTCGATGATC
TCCCGAGCGCGCATGATGATGTTGGCGCCCGTGTAGCACACGATCCCCGCCATCTCCATG
CTGTGCCATCGAGCACCTCTCCTCATGACGTAGCCATAGAAAGAATTGAGAATACATTTA
TGTGCCAATTGCAGTGAATCGTACAAAACTTCTCTGCTTTTGGCGGATTTGATCTCCGCC
GCGTCTCCGCTAGCAACCGCCTCGGAGACCTTCGCTTTCGCTTGCTTGTTCAGAGCTTTG
TATTCGTAACGACGATCTCTGAACGCACGTACAGTATCCACATAGAAAGAGTTCTCCTTC
TGGCATATAGTGGTTGTTCTTATTTCACTTCTAGTAACTTTGGTTTTCTTATACGCGACC
TTGCAGTAATCCGCTAATCGTTTTTTCTCGTACGCAGCCTGTTCCTCTTTCGGCAGCGTG
TGGAAGGGCCTGGGTGGACCCCCAGGATGTAGAGGTGGAAATTTTTCAGTTTCCAGCTGC
TGCTGTATACGTTGGTACTCGCTCCTCGTAGCCGGTAAGTAATCCCCGCGCCACATCCAC
TCCATGTGTCTCTGGCAAGTGGCCCCGGGCTTGTTGTAGTCACAGACGGCGCATGTACTG
GCATTCACCATCGCAGAGGGCTGCAATCTATTCGTCAATATGATGTTAGGGTACATAGCG
CCGACGTCCAAATGATAAATCAAAGGGTTCTCGTCCCTTCGCGGGTGCTCTTTCATATGT
TGTAGTTTCGCTTTAATCTCTCCGCAGACCTCGTCGAAATTCGTGACCATCTCCAGCGGT
ATACCTTCCTCCACCTCTATGGCGTGCCTCATGGTCTTCTCGGTGTTCTCCAGCAGCTTG
TCCACGGCCGTTGGGGCGATACGGAACTTGCATTTAATGTCCGCTCTGAATACACCGGAC
TCCAGAGCCTCGACGTGTCCCCCGACGTAAGTCTCCGTCTCCAGCACGTGCCCGTCGCTC
GTCAGCTTGTTCAGCTCCTCCACCTGCTTGTTCGGGAACACGATGTTCGCATGGAACGCC
TCGACCATCAGCAACGACTCGCACAGCGTGCCGGAACCTTTCCGGAGTACCTCGTCGGGC
TCCAGCGGGATAATGGTGCAGAGGGCAAATATGAACGGATGCACGTACTTCATGTACAAG
TAGTACGTGGCGACCGCGTCCGACACCGAGTAGTTCGACAGCACCTGAGGCTGTTCGGAC
GCCATCCTGCACATGTCTTCAGGGTCCAGCTCGACGGGGTCGTACCTCAGCTTGGCTTTA
GCGACCGCCTTCAGGCCCTGCGAGCCGACCGGCAGATACGAGTCTCTTTTCACCCAGCAT
AAGCAGTCCATGTGCATCGCAGGTCTGCAGACGTACGTGTTGTCGCGTGACGTCACCTTA
CTGAACCCTATCTCCTGCTTCATGTCCAGCCCTAGAATCGCGGCACGAGCTTCCACAAAT
GGCCAATCGAAGAAATCACCGTTATATGTGACAAAGATGTGTGGTTTCACATCCATGATA
TGATCGAAAAACTTCTGTATAAGTGCCAGCTCATTTGGTTCATTAAATACTATGAATTGG
CCTTCAAATTCCGGTTTAGGAGTATATTCAAAGTCTTCAACGTCGACCGATATAATTTCT
CTGTTTGTTATTAAGTACCCCTGTGCATCGATCATGTAAGAGATCATCATTATTTGATCT
GTTTGCGAGTCTGGAAACTTTAATGGTAGTTTTGTAGTTTCTATATCAAAGGCCAATACT
ATAGGATCTGGTCTCTCGATGATGTCATCTCGTTTTGTGAAAATAGGAGGGTCAGTACCT
CTGCATTTCACTGTGTACCATGTGCCACAGAATATTCTCATGTCTATAGAGACTCTTACA
TGATATGGCACATCATGTTCCCGGATGTCCAAAATATTTTCCATGTGATCAGTAGTTTTC
TTAGCGTGTTCGATAGCTGCTGCACTGGTTAATGCATTAGTTAACATTTCAGCATAAATA
ACATCTTTCTTTTCCCGCTCTTTATTTTTATTAACTGCCGTCAATATCTCCCGTCGGACT
TTCATCATATCATTTTGAGACATAAATGATAATTTTATGTAACGCTGTTTCAGACCTGAT
AAGTGGTTCATCAAGTCCAAATCTTCCTTCTCCAATACTTCAATCTTTTGCACTGAACTA
GCAAACTTCTTAGAGATGTATTGTATAACTTCCTGTTCACATTCTCTTCTGGCCATTATT
AGAAAATATGGTTGAAACATTAATGAAATTTTGAATCTGGTACCGTCCATCTCTATGAAA
TAGTAATCCATGGCAGCAACTAATCGTTTGTCTTCATCGAGTACCTCAGCCGTGTGCATA
TTGATCAAGTAGCCAGTCCTTTCTTTTAAATCTCTCACTCGATCGAAACCATACTTTGAG
TCAATTCTGTCATTCTCCAGAGCGGCACGAATTCTAGTTTCCGATGACTCTTCCTTGAGC
CCACCTGAAGAAGTTCCTTCTCTTCTAGCAGAATCATCTTTATCGGGTCGGTATTTTCCA
GTATTTTGAAGCACCATGATTAAAAAAGTACCTCGCAATATTAAACTAATCACGTACCAT
TATTATCCAAGATAATTTAATAATATTAAAACCTCCTTGTAAATTCCTCAAAATTATTTT
GTATCAACAAATAGATTCAAACAGCTGACCAATAACAATTCAGAGCTTCTGCAGTGACAC
TTAAGCGCTGTCAAA
(4935 bp)

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