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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp65557_c0_seq1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		PREDICTED:_DNA_polymerase_epsilon_catalytic_subunit_A_[Amyelois_transitella]
Ontology
GO:0000082 P G1/S transition of mitotic cell cycle
GO:0000166 F nucleotide binding
GO:0000731 P DNA synthesis involved in DNA repair
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003682 F chromatin binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005886 C plasma membrane
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006287 P base-excision repair, gap-filling
GO:0006297 P nucleotide-excision repair, DNA gap filling
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0008408 F 3'-5' exonuclease activity
GO:0008622 C epsilon DNA polymerase complex
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:0.38 TPM:0.66
ORF EntryO_BomoEE11951_complete:A_BomoEE_comp65557_c0_seq1
Sequence
(Nucleotide)
GTTGTACTTTAAAAACTGAGACCTAAGAACTCATGTCTCGAGGTGAGTGGCGGCATTTAC
GTTGAAGTTATCTATGGGTTTCAGCAACCACTTAACACCAGTGGGCTGATCTCGTCCATC
CATTAAAGTAATACTTTTTTATCTAAACTGCCATATATGATTATTATGCGGTAGCTATGT
GCAGAAAAATGAATCTGACCCGTTCAGACTCGGGAAATATAATACATAATTTATATGTTT
ATCATACGATTCAATGGCAGCTGTAAAGAATAATTCAAGCATAGTGGGAGCATTTCGTTA
TCTCTGTTCTTCAATAGCAGTGACGTCATAAGACACTACATGCATCCTTTTGACTAAATG
TTGTTTATAGGGCTCACTTAGCTGTCCTTTCGGCTGCGTAAAGGGTGCTCATGTTAGGTA
CTTGATTGGTCTTGACCGTGTCCTGTACGAAAATATATCCTTTTTTCAGAGGACCCAGTA
TCAATGCCCACATACTGCGACTGGAATTCACAGACGAATGCTGGTACAGGAATATGTGTT
TAATCGGAAACTGTCCATCCTGCTTCGGTAAGTAAGGTTGATGTGCGACACTCTTGAACT
GTAGTTGATTCAACGTAAACGAATCCATATTGTTTGAACCGAACTGTATCATTCGTCTCG
CCTCTTGCGGCTCCACAGCGCAGATACATCCGAGTTGTACCAGAATCCTGAACTCTAAGC
TCATCTGTGTCTCGTAAATACCTTCTATTTCCGGAGCCGATAATTCACCCATGAGCTCTT
CCTGATGTTCCCTGTAGAGCTGTTCGGGCACGGAGTACTGGTAGAGGTGCAGCACGGGGT
GCGCGCGGGGCAGCAGGCGGCTGCAGCGGCGCCAGTAGCGGCCGCTGTCGGCGCCGCGGC
ACACGCGCTGGTTCACGTAGAACACGCGCGGCACCGACACCTTCACCTGGTGCAGCTCGG
CGCCCACCAGCGCCCACACCTTGAACAGCCCCGGCTCGGCTGTTTCCGCTACCTGTATAA
TTTGCCATGGTGTATTCAACAAGGTGCGCTGTGCTCTCCTGATAAAACTACCTAACGTGG
CGGCCGGCCCGGAACTCCTCGGCGGCGGCATTATGTCACTGTCAATTTTACCTCGTTTGT
TTCGATTTCTTAAGCCACGTTGCTCCATTTGCCACAGCCATTTTCTTTTTTGAAACAAAA
TCCAATTTCTTCGTTCTTCCTTAGTATTTCCGAAAGGCGGCGGAGGTCCCAGCGCCTCTC
TCCACGTGGCGGCGGCGTCTTGAGGCGGAGATTCAGTCCGCTTCCTCTTCATAGTGTGCA
CTACCGGACGAATTATTGTGGCCCTCCCTGTCTTGTCATTGCCAATGTCTTCCATGTCCA
TTTCTGTGTTCGAGGTATCAGCACCAGCGGCTTCCTCCGCGTCTTCCTCCACGGTGCGTA
GTTCCCTGGGCTGCGCGCTGAACATGTCCGTGATCTTCCTCGTTTTGTACTTATCCGTTT
TGGCGAGCATCTTCTTGTGCAACCAATCCGGGTACTGTACCCGGGGCACCGGATTGTCCA
AGCCTTGCATGGCGGCCGGTATGGTGATGATCTTCTGTATGGCCCCGCTGAGCCTCTCGA
TGTAGTAGGCCCAGTCCAGCACGTCGCGGATGTCGATGTGCTCGGAGACGCTGGAGTCCT
TGAGCCAGCGCCGCAGGTGGTGCCGCTTCACGGCGGCCGGCGACTGGAAGATGGCGAGCG
GGATCGCTCGTTCCGTCACCGGAGCACCCTCGGGCTTCTTCGATATTATGAATCTGCAAG
CCAAGCCGGCGTCCTTGACCATCTGATCACCGAGGAACTCGGCCAGTCTCTTGGCGGTCG
ATATCGACGTAGACTTCTGTCCGCCGTAATCCTCCAGCTTCTTGGACATGGAACGGTTCT
CCGATATCAACTCGAAGAGTTCGGCGTCGGGCATGTTGGAGCCCCGGCTGTACAGCACGT
CCAGCCAATAGTCCGCGACCCGGGCCACGGCGCCGTAGCACGACTTCAGATCGTTACCTT
TGAGGAAGGCCTCGAATACGGAAGATTGAAATATTTTGATGAGTTGCAGTTCGCCGCGAC
GTTTTACTTCGAAACCTTTTAATTCAGCTAATGACCCGTCAAAATTGAAGACGGCATAAC
GCTTCTTCAACCTTTTGCCTTCTTCTTTAGAAGCCGGCAACACCATGGCCAAGTAAGGGC
CGTCCACTTCAAAGAATATCGAGTTTTCCGAGCGCTGCTCGTATCTCTTCTGTTCCGGAT
CCACGAGTTCGAAGTACTGGTCGTTTGTAAAATGATCCTTAACCATTGCATTGAGTACAG
CGTTAGGGAAGGAAACATTAATCTTCTTTTTCTTCGGATGATTCGTGTGGATGGTCACGT
TTTCTGGGAACGATGACGGTAATATGCACCAGATACCGTCAGTATCCAACTCGAGCGGTC
TGCCAACTTGTTCGATGATCTCCCGAGCGCGCATGATGATGTTGGCGCCCGTGTAGCACA
CGATCCCCGCCATCTCCATGCTGTGCCATCGAGCACCTCTCCTCATGACGTAGCCATAGA
AAGAATTGAGAATACATTTATGTGCCAATTGCAGTGAATCGTACAAAACTTCTCTGCTTT
TGGCGGATTTGATCTCCGCCGCGTCTCCGCTAGCAACCGCCTCGGAGACCTTCGCTTTCG
CTTGCTTGTTCAGAGCTTTGTATTCGTAACGACGATCTCTGAACGCACGTACAGTATCCA
CATAGAAAGAGTTCTCCTTCTGGCATATAGTGGTTGTTCTTATTTCACTTCTAGTAACTT
TGGTTTTCTTATACGCGACCTTGCAGTAATCCGCTAATCGTTTTTTCTCGTACGCAGCCT
GTTCCTCTTTCGGCAGCGTGTGGAAGGGCCTGGGTGGACCCCCAGGATGTAGAGGTGGAA
ATTTTTCAGTTTCCAGCTGCTGCTGTATACGTTGGTACTCGCTCCTCGTAGCCGGTAAGT
AATCCCCGCGCCACATCCACTCCATGTGTCTCTGGCAAGTGGCCCCGGGCTTGTTGTAGT
CACAGACGGCGCATGTACTGGCATTCACCATCGCAGAGGGCTGCAATCTATTCGTCAATA
TGATGTTAGGGTACATAGCGCCGACGTCCAAATGATAAATCAAAGGGTTCTCGTCCCTTC
GCGGGTGCTCTTTCATATGTTGTAGTTTCGCTTTAATCTCTCCGCAGACCTCGTCGAAAT
TCGTGACCATCTCCAGCGGTATACCTTCCTCCACCTCTATGGCGTGCCTCATGGTCTTCT
CGGTGTTCTCCAGCAGCTTGTCCACGGCCGTTGGGGCGATACGGAACTTGCATTTAATGT
CCGCTCTGAATACACCGGACTCCAGAGCCTCGACGTGTCCCCCGACGTAAGTCTCCGTCT
CCAGCACGTGCCCGTCGCTCGTCAGCTTGTTCAGCTCCTCCACCTGCTTGTTCGGGAACA
CGATGTTCGCATGGAACGCCTCGACCATCAGCAACGACTCGCACAGCGTGCCGGAACCTT
TCCGGAGTACCTCGTCGGGCTCCAGCGGGATAATGGTGCAGAGGGCAAATATGAACGGAT
GCACGTACTTCATGTACAAGTAGTACGTGGCGACCGCGTCCGACACCGAGTAGTTCGACA
GCACCTGAGGCTGTTCGGACGCCATCCTGCACATGTCTTCAGGGTCCAGCTCGACGGGGT
CGTACCTCAGCTTGGCTTTAGCGACCGCCTTCAGGCCCTGCGAGCCGACCGGCAGATACG
AGTCTCTTTTCACCCAGCATAAGCAGTCCATGTGCATCGCAGGTCTGCAGACGTACGTGT
TGTCGCGTGACGTCACCTTACTGAACCCTATCTCCTGCTTCATGTCCAGCCCTAGAATCG
CGGCACGAGCTTCCACAAATGGCCAATCGAAGAAATCACCGTTATATGTGACAAAGATGT
GTGGTTTCACATCCATGATATGATCGAAAAACTTCTGTATAAGTGCCAGCTCATTTGGTT
CATTAAATACTATGAATTGGCCTTCAAATTCCGGTTTAGGAGTATATTCAAAGTCTTCAA
CGTCGACCGATATAATTTCTCTGTTTGTTATTAAGTACCCCTGTGCATCGATCATGTAAG
AGATCATCATTATTTGATCTGTTTGCGAGTCTGGAAACTTTAATGGTAGTTTTGTAGTTT
CTATATCAAAGGCCAATACTATAGGATCTGGTCTCTCGATGATGTCATCTCGTTTTGTGA
AAATAGGAGGGTCAGTACCTCTGCATTTCACTGTGTACCATGTGCCACAGAATATTCTCA
TGTCTATAGAGACTCTTACATGATATGGCACATCATGTTCCCGGATGTCCAAAATATTTT
CCATGTGATCAGTAGTTTTCTTAGCGTGTTCGATAGCTGCTGCACTGGTTAATGCATTAG
TTAACATTTCAGCATAAATAACATCTTTCTTTTCCCGCTCTTTATTTTTATTAACTGCCG
TCAATATCTCCCGTCGGACTTTCATCATATCATTTTGAGACATAAATGATAATTTTATGT
AACGCTGTTTCAGACCTGATAAGTGGTTCATCAAGTCCAAATCTTCCTTCTCCAATACTT
CAATCTTTTGCACTGAACTAGCAAACTTCTTAGAGATGTATTGTATAACTTCCTGTTCAC
ATTCTCTTCTGGCCATTATTAGAAAATATGGTTGAAACATTAATGAAATTTTGAATCTGG
TACCGTCCATCTCTATGAAATAGTAATCCATGGCAGCAACTAATCGTTTGTCTTCATCGA
GTACCTCAGCCGTGTGCATATTGATCAAGTAGCCAGTCCTTTCTTTTAAATCTCTCACTC
GATCGAAACCATACTTTGAGTCAATTCTGTCATTCTCCAGAGCGGCACGAATTCTAGTTT
CCGATGACTCTTCCTTGAGCCCACCTGAAGAAGTTCCTTCTCTTCTAGCAGAATCATCTT
TATCGGGTCGGTATTTTCCAGTATTTTGAAGCACCATGATTAAAAAAGTACCTCGCAATA
TTAAACTAATCACGTACCATTATTATCCAAGATAATTTAATAATATTAAAACCTCCTTGT
AAATTCCTCAAAATTATTTTGTATCAACAAATAGATTCAAACAGCTGACCAATAACAATT
CAGAGCTTCTGCAGTGACACTTAAGCGCTGTCAAA
(5195 bp)

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