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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp65516_c0_seq1
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		PREDICTED:_ATP-binding_cassette_sub-family_B_member_8,_mitochondrial_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0002481 P antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent
GO:0002485 P antigen processing and presentation of endogenous peptide antigen via MHC class I via ER pathway, TAP-dependent
GO:0002489 P antigen processing and presentation of endogenous peptide antigen via MHC class Ib via ER pathway, TAP-dependent
GO:0002591 P positive regulation of antigen processing and presentation of peptide antigen via MHC class I
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
Transcript
Level		FPKM:12.62 TPM:22.01
ORF EntryO_BomoEE11913_complete:A_BomoEE_comp65516_c0_seq1
Sequence
(Nucleotide)
GTCACGTTTGACATGTATTTTTGAACTAAGATCAAGACTTTTTATTAATTTAATTTATTT
AAAATAAAACCTAATCATGTATTATTAATTCATTATAGGCTAAGAAATATCAAATAATTT
TATAAAATGTGGTATATGTTACAGAATCACTTATTTTGTCTCACAAGACAAAGGTTCCTG
GCTTCAAAAAGTAATAAATACTTCACTAATATAGTAAAAAACAAGCCATCAGACGCTTTA
AATCGATATATATCACAGTTAAAGACTCGTGGAAAAAGTTCAAAGTCTGGAGAATCATTG
CCTTGCAGTCCATGGAAATTGTGTACAGGAGTTAGTTTAGCTATTGGCGCTCGGTATTTT
CTATATAGGAGTCCAGTATTTTGTAAAGCAGTTCAGACTTCGAGAGTAATACAGAGAAGG
CCGAATTTCCAAGAGGATACCGCTAAATTTGATTGGGAAAAATTATTGAACTATTTAAAA
CCTCATAAATGGCTCCTTATAGCTGCTGTTGGTTCTGCGTTAGCTGTGGCATTCCTAAAT
GTGTACATCCCAGCTATGCTCGGTGTCATCGTGAATGTTCTAGCAGGAATAAGGAATAAT
CCGGCTGCTGATTTCATTGACGAGATCAAGATGCCGGCATTTAAATTGATTTCATTGTAT
GTTGGACAGGCAGCTTTTACGTTTTTCTACATTCACTTGCTGTCACAAGTGGGAGAAAAA
GTGGCCACTCAAATGAAACAAGATCTATTTGTATCTATTCTAAGACAGGATATAGAATTT
TTTGATAAAGAAAGAACTGGGGAATTAGTTAATAGGTTAACAGTGGACGTACAAGACTTC
AAAAGCTCTTTCAAACAGACCATATCGGGAGGTCTTAGAGCTATTACGCAGGTGGTGGGT
TCTGCGGTGAGCCTCTTAGTCATATCCCCACATTTGACAGGGCTGACGATGATCTGCGTC
CCGTCAGTTGTTATCGGAGGCACCTTCATTGGTTCGCTGTTGAGGAAATTGTCCAGGGAA
GCTCAAACTCAGATAGAAAAGGCGACGTTGGTGGCGGAGGAAGCACTCTCCAACATGCGG
ACGGTTCGAGCCTTCGCCGCCGAAGACAGCGAGGCGCAGATGTTTGCCAAGGAGTGTGAC
GAGGCCGCCCAGCTCAGCATGGAGCTGGGACTCGGCATCGGATTGTTTCAGGCCGGGACT
AACCTGTTCTTGAATGGAATGGTGCTCGGCACTATGTTCCTCGGCGGTCATTTGATGTCG
ACCGGGCAGATGTCGGCGGGAGACGTGATGGCGTTCCTGGTGAACGCGCAGACTGTGCAG
CGCTCGGTGGCGCAGCTGTCTCTGCTGTTCGGCTCCGTCGTTAAGGGGATCAGCGCCGGC
GGTCGGGTGTTCGAGTACATCAATAAGAAACCCGCAATGGACACGTCCGGTACTAAGTAT
ATAAAGTACCACGAGTTTCACGGCGACATCGAGTTTAAGAACGTCACATTCGCCTATCCC
ACAAGACCGGAGGCTGTGATATTGAAGGATTTCAATCTTAAAATACCTGCTGGCAAGACG
GTCGCCATAGTCGGCACATCTGGCAACGGGAAGTCTACTATCGCTGCTCTGTTGGAAAGG
TTCTACGACGTGAACGAAGGCCAAGTGTCGATAGATGGCGTTGTCTTGCGCGAGTTCGAC
GGCAAGTGGCTCCGCGGGAGGGCGCTAGGTCTGATCGGCCAGGAGCCGGTCCTGTTCGCC
ACCACGGTCCGGGAGAACATCCGGTACGGGAGACCAGAGGCCACTGATGCTGAGGTGATG
CAGGCGGCTACGATAGCCAATGCTCATGAGTTCATACAGTCGTTCCCGGAGGGGTACGAT
ACTCTGGTCGGCGAGAGGGGGATGGCTCTGAGCGGGGGACAGAAGCAGCGAGTCGCCATC
GCCAGAGCCGTGCTGAAGAATCCACCGGTTATAATACTGGACGAGGCCACCAGCGCTCTT
GATTCCGCGAGCGAGAAGGTCGTACAGAAGGCGCTGGAGACGGCGGCCAAGGGTCGGACC
GTGCTGGTGATAGCCCACAGGCTATCCACGGTCATCAATGCCGATCTGATCGTCGTATTA
AACAAGGGGAAGATTGTTGAGATGGGAAATCATGAACAATTGAAGAAATTGAAGGGTTTT
TATTGGAATCTTATAAAGCAACAGGATCAAGATCTAGAGCAATCGAGATGATGGGATTGT
GTTACAGTTGGTGGGGCAGGGTGGCCGCCGTCCTCATGTGACATCGACCTCATGTCTCAA
AGTGTTTGGGACCGCTTAGGATCTGATGTTCATTAACTCTGTATTCACTGCTAAGATGAG
GGTAAAATTTAAAAATAGATTTACACTTGTGTTGAATTCTCAAATACACACATAGAACAA
ACATAAGTTTGACAATAAATGATAATAGTGATGACGTCACGATTTTCAAACGAAACCGTC
TATGGTTAGTAGATTGCAATAATGCATTCATATCAATTAGTGAGATAAGCAAAGAATTTC
ATCATTATTCATCATTCATGATTTTACTGATATGAACAATATCCAAAGAGATAGTATGTA
ATTCAAAAATTCATTAACACACATCTAGGGATCCGGGGTAAGTTATATTACTAAAATTGA
AGCTGGCCGAGGGTATTGTAGGCCCGTGCGGGTAGGTACCACCACCTTGTCTATTTTTGC
TGCGTAGCAACCATGCGCCAGTTTTGAAGGGTCGGTAAATCATTTAGAAGTAAAATCTTC
GTCCTTTAGGGTTGTGGACTCGCCTGTGGACTCGGTGATGCAAAAAAGTTATAGTAATAG
AAAAAGCCAATGAAACAACTCTATATCGCCCAAATAAGAGAAAGAGAGAGAGAGAGCACG
CGTTGGTACTTCTGACGTCACTGCCGTGTATAATCTGTAAACGTTACAATCGCGCAGCTG
ACTTCATATGCCGACCACAGCTCTTTGAAAAACACTATTTGCATTCATAATATAACGGGT
TAAAGATTCATTTTGTGTAAAGAAACGAATAGACAAGGATACCTAAATAAGGTTTTATTG
TTATATACCTTTGTTGTTTGTAAAAGGAATAAAAAGTGTTACCAGAAAAAAAAAA
(3115 bp)

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