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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp65509_c0_seq1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_pre-rRNA_processing_protein_FTSJ3_[Papilio_polytes]
Ontology
GO:0000453 P enzyme-directed rRNA 2'-O-methylation
GO:0000463 P maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 P maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0001510 P RNA methylation
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0008649 F rRNA methyltransferase activity
GO:0008650 F rRNA (uridine-2'-O-)-methyltransferase activity
GO:0016435 F rRNA (guanine) methyltransferase activity
GO:0016740 F transferase activity
GO:0030687 C preribosome, large subunit precursor
GO:0030688 C preribosome, small subunit precursor
GO:0031167 P rRNA methylation
GO:0032259 P methylation
GO:0042254 P ribosome biogenesis
Transcript
Level		FPKM:37.50 TPM:65.40
ORF EntryO_BomoEE11911_complete:A_BomoEE_comp65509_c0_seq1
Sequence
(Nucleotide)
ACCGAAGTCCCTCCGCAGACCCAGCTACTTGCATTATTACAATTAGTTGAACAATCCATA
AAATTTTCTTCAGGTACATCAAATGTAAAAAAAGCCGATTTTAACTTAATGACTTGAATG
ATTGTATGTTCGTGCAGCACATAATTGAAAAAAAAAACTCTATGGTATGAAACACGAGAA
AATAAACATAACCTCACTTGTACACACACTCGTAATGTGCATATTGCATTCAATTTTGTC
ATGTAATTGATTATAATCAATTGTTTTTAGAAATAACCCCAGAAGTCATATGCTTAAAAA
AGTAACATACTACAATGGGAAAGAAAACAAAAGTAGGAAAACAACGGAAAGATAAATACT
ACCAACTAGCTAAAGAAACAGGATATAGATCAAGAGCTGCATTCAAATTAATACAATTGA
ACAGGAAATTTGGATTTTTGCAGAAATCACGAGTATGTATCGATTTATGTGCTGCACCTG
GTGGGTGGATGCAGGTGGCCCACCAAAATATGCCAGTCTCGAGCATAGTAATAGGAGTCG
ATTTGTTTCCAATAAAACCAGTTCCAGGTTGTATAGGTCTGACTGAAGATATCACTACAG
AAAAATGTAAGGCAGCAATCAAAAAAGAAATAAAAACATGGAAAGCTGATGTGGTACTTA
ATGACGGTGCACCCAATGTCGGTCTTAATTGGATCCATGATGCCTATCAACAAGCTTGTC
TAACGTTGAGTGCTTTAAAACTTGCAACGAACTTCCTCAGAGAAGGTGGTTGGTTTGTGA
CTAAAGTATTCAGATCGAAAGACTATCATGCACTTTTATGGGTTCTGAAACAATTCTTCA
AAAAAGTACATGCTACAAAGCCCCAAGCTTCTCGTAATGAGTCTTCTGAAATTTTCGTTG
TATGTCAGGGCTATATTGCACCAGATACAATTGATCCTAAATTTCTCGACCCCAAACATG
TCTTTGAAGATCTTGATATAGTTAAAAAACAGCATATAAATATATTACATCCTGAGAAAC
AAAAAAAAGCAAAAGCAGAAGGATATAAAGAAAATGATTATACCACACATCATAAAGTAA
AACTGTCTGATTTTTTGGGAAAAGATGATCCAGTAGATCTACTTCATGGTTGCTCTGAGA
TTGTTTTCGATGATAAGGAAATAGAAACTCATCCAAAGACAACACCAGAAATAAAGGAAT
GTTGTAAGGATATTAAGGTGCTTGGACGAAAAGACTTAAAATCACTGCTGTCATGGTTCA
AGCAAATGAAAGAATATAAATCGTCTAAGGAGAAAAAAGATGATGAGCCCCAAACCAATG
ATGAAAACGAAGAACATGAAACAAATGAGGATGCTGATACTGAAGAAGGTGATGTGGACA
CACAAATTGCAGAACTGCAGGATGAAGAGAAGCGACAATTGAAACGTAAAAGGAAGCAGT
TGAATAAACAGAGACAAAAACTAGCTGAAAAAATGAATCTTAAGATGGTATTGAAAGGAG
ATGATGGTCCTATTTTGGAAAGTAATGATATGTTTCAACTCTCTGATATCAAGAATGCAG
AGGAACTGAACACGCTTATAGATCAGCAGCCTGACACCGTGGTTGATGGAGATGATGCTT
TTGATGATGAGATTCAACTTAAGCCAAAGTACTTGAAATACGATGTTGAGGAAACCAAGC
TCGATTCATCAGGACTTTATTACAAAGATTCAGACAGTGAAATTGAAATGGAATCTGATT
CAGAATCTGAACAGGAAAAAGAGTCATTAGCCTTCTCAGACTCAGACACTGAATCGAAAA
AGATCAAAAAATTAACTAAATTGAATACTCTAAAAAACAGTAAAGTGAGTCCAGCAAACA
AATTGAATAGATTACAGTCTATTCCAAAGAATAACCCGTTGCTCACTGATCTGGACAACA
CTGACCCAGTTTCGAAAAGGACTATGAAAGCTCAGCTATGGTTCGAGAAAGATTCTTTTA
AAAATATTGATGAAGAAGCTGATGAAGGTATAGATTTGGACAAGTTAACAGAAACATTCA
AGGAAAAAGGGAAGAAAGTCATTGAAGATGTGGAGTCAAGTAAACAAACCAGTGCACTAA
AAAGAAAATTGTCAGACAACGAGAGTTCAGATGATGATTCCTCTGACAGTGATTATGATG
TTGAAGAAAACGTTACTCCCAGTGCTTCTAGTGCTGGGCCAAAAGCCGGCAAAGAAGGTT
TTGAAGTTGTCTCCCAAGATCCAGAACTGAAAAAACTAAAGAAAACTTTGAAAATGGACG
CAGAGACACTTGCTTTAGGAACCATGATAGCTACATCAAAAAAATTCAAGAGGGATTTAA
TTGATGACGCGTGGAATAGATACGCGTTTAACGATAAAAACTTACCAGATTGGTTTATGG
AAGATGAAAAGAAACATATGAAGAAAGACATTGTGATACCGGAGAAGTATACTGATGAAT
ACAAGAATAGATTACAAGACATCAATGTGAGGCCTATCAAGAAGGTGATTGAAGCCAAAG
CGCGGAAGAAGAAGCGCTTGATCAAAAAGATGGAACGTGCAAAGAAAAAAGTCGAGGCGG
TAATGGAGAACGCTGATATGTCCGAGCGAGAGAAAGCACAACAAGTGAGACAACTTTACA
AGAAGGCACAATCTGATGGTAAAAAGAAAATCACTTATGTGGTGGCCAAGAAACATACAA
CTGCTAAGCGTATGAAGAGACCACAGGGCGTTAAGGGCCAGTACAAAGTGGTAGATCCGC
GCATGAAAAAGGACTTACGTGCCCAAAAGGCAAAGGAGAAAACAAAAGGTCGAGGTAAAA
AACAACCCAAGAAACAAAACAAGCCTAAAAAAGTCCCCAAAAAGAAAGGAAAAGCAAAGT
GATCACTTGTGTTGTTAAAACAGAAATAAAAGTTTCTTTTATAAATTTATTATTATTTAA
AAAAAAA
(2947 bp)

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