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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp65505_c0_seq1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_tRNA-splicing_ligase_RtcB_homolog_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0003972 F RNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0006396 P RNA processing
GO:0008033 P tRNA processing
GO:0008452 F RNA ligase activity
GO:0016874 F ligase activity
GO:0022008 P neurogenesis
GO:0046872 F metal ion binding
GO:0072669 C tRNA-splicing ligase complex
GO:2000237 P positive regulation of tRNA processing
Transcript
Level		FPKM:64.24 TPM:112.05
ORF EntryO_BomoEE11904_complete:A_BomoEE_comp65505_c0_seq1
Sequence
(Nucleotide)
ATTATACACTTAATATATTAGAGAGTAATAGTGTTCTGTGCACTTCTCTGAACGCTTCTT
TCAATTTTCAACTAAGTTTTCAATTGCCATTTACCTACGTTTTTCAAACCTATCCAGTAG
GTTTAAATAGCATTAACACACCTTTTCGATACACAAGTAGTGCAAAATAATGGTTGTAAG
GCAGTATAATGAAGAAATTAAATATTTGGAAAAAATTAATCCATATTGTTGGAGAATTAA
AAAAGGCTTCCAACCAAATATGAATGTTGAAGGAGTGTTTTACGTTAACAGTACACTTGA
GAAACTAATGTTGGAGGAGCTTAGGAATTGTTGTAGACCTGGTATGTCAGGTGGATTCCT
TCCTGGTGTAAAACAGATAGCTAATGTTGCAGCTTTACCGGGAATTGTAGGCCGGTCAGT
GGGATTGCCTGATGTTCATTCTGGATATGGGTTCGCTATAGGAAATATGGCAGCTTTTGA
TATGGATGATCCCAAATCTATAGTATCTCCAGGAGGCGTAGGATTCGATATAAACTGTGG
TGTTCGTTTATTGAGAACAAATTTACATGAGAAGGATGTTCTACCTATTAAGGAACAATT
AGCTCAGAGCTTGTTTGACCATATACCTGTTGGAGTTGGCTCCAAGGGTATTATTCCAAT
GAATGCACGTGATTTGGAAGAAGCATTAGAAATGGGTATGGACTGGTCTCTAAGGGAAGG
TTATGTTTGGGCCGAAGATAAGGAACACTGTGAAGAATATGGAAGAATGTTGAATGCTGA
TCCATCAAAAGTCAGTCTCAGAGCAAAGAAAAGAGGTCTACCTCAACTGGGCACACTAGG
AGCTGGAAATCATTATGCAGAGATTCAAGTTGTTGATGAAATATTTGATAAATATGCTGC
TGGAAAAATGGGTATTGAAAGTATTGGTCAAGTTTGTGTGATGATTCACTCTGGAAGTCG
TGGTTTTGGGCATCAAGTAGCAACTGATGCTTTAGTGCAAATGGAGAAAGCTATGAAGAG
AGATAACATAGAAACTAATGATAGACAACTTGCATGTGCCAGGATAAAATCTGTTGAAGG
TCAAGATTATCTTAAAGCTATGTCTGCTGCTGCCAATTTTGCTTGGGTGAACCGTAGCTC
AATGACATTCTTGACCCGTCAAGCTTTTGCGAAGCAATTTAAAATGGCACCTGATGATCT
TGACATGCATGTCATATATGATGTGTCTCATAATATTGCCAAGGTTGAAGAACATGTAGT
AGATGGGAAATTGAAAACTCTACTAGTACATAGGAAGGGCTCAACTAGAGCATTCCCACC
AAATCATCCATTAATACCTGTGGATTATCAACTAACTGGTCAGCCTGTACTTATTGGTGG
TACAATGGGAACCTGCAGTTATGTACTAACTGGTACTCATCAAGGAATGACAGAAACGTT
TGGATCCACATGCCATGGTGCTGGTCGAGCTCTGTCTAGAGCCAAGTCTAGAAGAAACAT
AGACTACAAAGAAGTTCTAAACAAACTTGAAACTATGGGTATTTCCATTAGAGTTGCATC
TCCAAAACTAGTAATGGAAGAGGCACCAGAGTCATACAAGAATGTAACAGATGTCGTAGA
TACATGTCATGCTGCTGGTATTAGCAAAAAAACTGTTAAATTAAGACCAATTGCAGTTAT
AAAAGGATGAACTCACTTTCCTAATGTGATTATTAATTATCATTCTTTTTAAAAACTGTT
AAGACAGTTCATATATTGATTGAATTATCTAATTATACTATAATAATATGTAATGGATTT
CCTAAAAACTTGTGAAGAATTTGTAAAGTACAACAACAAATCAGTTGAAATAAGCACCAT
GAAAAAATTTATTCCTAATAATAAAATTTCGTCTGTTTGTATTTAAAACATGCAGTTTTT
CTATTTCATTCATGTTTTTCAAAATCACAAATACAAATGTTAAAACCTTAATCTGAAATA
TTGCTATACGATTAACTACACCAGACCTTGGAACTCATATATCTAGGTGGGTGGCGGTAT
TTACGATGTAGATGTCTATGGGTTCCAGT
(2069 bp)

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