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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp65451_c2_seq1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		replication_protein_A2_[Bombyx_mori]
Ontology
GO:0000723 P telomere maintenance
GO:0000724 P double-strand break repair via homologous recombination
GO:0000781 C chromosome, telomeric region
GO:0000784 C chromosome, telomeric region
GO:0000785 C chromatin
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005662 C DNA replication factor A complex
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006289 P nucleotide-excision repair
GO:0006298 P mismatch repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0010569 P regulation of double-strand break repair via homologous recombination
GO:0016605 C PML body
GO:0019899 F enzyme binding
GO:0019903 F protein phosphatase binding
GO:0031571 P mitotic G1 DNA damage checkpoint signaling
GO:0031625 F ubiquitin protein ligase binding
GO:0035861 C site of double-strand break
GO:0047485 F protein N-terminus binding
GO:2000001 P regulation of DNA damage checkpoint
Transcript
Level		FPKM:39.28 TPM:68.51
ORF EntryO_BomoEE11847_complete:A_BomoEE_comp65451_c2_seq1
Sequence
(Nucleotide)
AAGAGTTGTTGGCATTACCGCCTAACAAAACTTTGGTGTGATACGTAATTATAATATAAT
ACAATATTATAATTTCAAAACAGTAATAATTATAATCAATTCAGTATCTTAAATAAACAT
TAACTATATTACTGACAAGGGATCTATACGAGAATTCACTTATAATTGTTTATAGTTCTT
TTGTATGTGATATTAAACAGTAAACTTAGGTTGGGTAATTTGAACAGAGTGGTATTGCCT
TCAAAGACCTAAAAGTCTTTCACATCACACGACACACGTAACATCCTGCTGAGTATTCAT
CAAAAAGCCCCTTTCATACCTTCGTTAGCTGAAGGGTAATACCGATATAGCCTCCATGCA
GCAAGATAACAAAGCCAACCCGTACGCAGTAGGTATCTGCTGCGTTCATTTCACAGGAAA
TATCAGCGTTGACGCGACATTTCTAAGATACATTCCGATGTGAAAACACTTGTAAATTTG
GTTAGTTTTTTTTTTTTTGGTACAAAATATTTATTACATAAAAGTTTTAAAAAATGAAAT
ATATAACTTTTAAAATGCATCAGTTGCTCTAAAATGCTCTTCATCAATTGTTGAGTAGAT
ATGACCTTCTCCACACATCCATTCCAAAATGTTTTCAAATTCAACTTTTGTCATTCGATC
TTTCAGTGAGGCATACATATCTTGTTTACTAATTCCTTGTTCAACAGTAGAGCCACGGAT
AAGGTTGAAGACCATCATCTGACGAGAATTTAAGCCATTCACTGAAGAGGTTTCAGTAAT
TCCAACCATTGAATTTGCAGGCAGCATGTTGTTAATTGGGACATCTTGAATATTTTTTTC
CTTCTTTGAGCCAGCTTCCATTTGTATTTTATTATGAATGCACTGAAAGTAGTGAAATGT
AATAATGTTGACATCAGTAACTGGCATTATCTTAAATGCCATGAGCACTTTTGTCCCTTT
ATTCGTTTTCACATTGCCGTAAATTTGTATGTAATCATTTACTTGAACTTTAGGTGATGA
GGTATCTTCAACTTCCATAGCCTCTTGGTCGAGCCAGAGTACAGCCCTCATCCTCCCTGT
TATATCTTGGATTGTATATGTTATTTTAGTGCTTTGCATTCTAATGCTCCTGATTCTTGC
AACTATTGACACTATTTGAATTTCTGTACCCCATATTTTCACACCTTCTTCTCCAGAATG
CAAAGCTTGCCTGATGACTATAGGTGCTGTCCGTGCCGCTCTACGACCAGTTTTTTTGGG
TGTTGCCGTATTTCCAAATTGATTTGTGGTGTTAAGGAAGCCACCTCCAGAAGGATCATC
ATTCCACATTGTTTTAAAGTAGAGGTCAAAATTGTTAGTTGAAGACTATTCTAGTAACAG
CAGTAGTACAATGCACTAAACAATTCCGAACCGATCTTAATAGAAAAGGTAGTATGGTTT
AATTTTTTTAGTTTTGATTCTTATTCCTGTAAACTTTTTTCAAGCGAGTAAGCCACTATA
GTCGGATTTTTAATTAG
(1517 bp)

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