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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp65351_c0_seq2
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		Uncharacterized_protein_OBRU01_08225_[Operophtera_brumata]
Ontology
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0000777 C kinetochore
GO:0000973 P posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0005487 F structural constituent of nuclear pore
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005813 C centrosome
GO:0006355 P regulation of transcription, DNA-templated
GO:0006406 P mRNA export from nucleus
GO:0006606 P protein import into nucleus
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0017056 F structural constituent of nuclear pore
GO:0031080 C nuclear pore outer ring
GO:0031965 C nuclear membrane
GO:0034399 C nuclear periphery
GO:0051028 P mRNA transport
GO:0051292 P nuclear pore complex assembly
Transcript
Level		FPKM:1.79 TPM:3.11
ORF EntryO_BomoEE11720_complete:A_BomoEE_comp65351_c0_seq2
Sequence
(Nucleotide)
ATACAAACGGAGTAGATACCTTGGCTTAAAGGACTTTGTTTGCAAGCCAGTAAAATTTGT
TAAAAAAGAGTGGGTTTATAATTTCTAAATTTTCAGGCTACTAACGCTAATTTAAAGTGT
ATCATCTATCATCAGTTTTCAGCCTGTATTGAATATAATTAAAGCTATTTTGCTTTAAAA
ATGGATAATACTTTGCAACTACATTCAACACAGTATACTCCTTTAAGAAATAAGAGAAGC
CGACATTTACTACAGAGAGAAGAGACGTTAAATGTTTCGCCTATTTTGAACGATACTTCT
ATTTTTAAAAACTTAAATGATTCGAGTTTACGGCATGTACTTGATGAATCTTCCATATTG
GCGAATCCCAGTAGCACGGGAGATCATTTGAGCGAAGAATTCTTCGAGATAATACAAAGC
AGTAGACCTAGCAGTGTTTTAGATACATTAGCAAGGTTAGCTCAGGTATGTTGTGATTCG
TTAGAGTTAATCGAGCCATGGAACAGATATAACGTCCACAACTACTGGTTGGCAGAGGAA
GCCAACACATGGAAACTAATACATTGCCTGTACGCAGATTCAATCTCAGAACATCCAGAG
TCTTTGGAAAATTTAGTTACTGAAGCAACACTATCACAGCAGAGCTTAGTGAATGCTCTA
TTTAGAAGTGATTCTGAACTGAGACTGTTGCAGCTTCTGGTAGACTGGTTGGAAGCAACT
GCTGCTTATCAAGAGGAAGCGACAAAAACTTCAGCACCTGTCATTGGAAATAACATACAC
TGGGGCAACACTTTACATGAACTGCTGATTGGAAATAGTCTATTCAACAAAGAAAAAAAC
AAGTCTCTAGTCACATGTATGGATCCAGATGCACCAAGAAGACAAAATAAATCTATACAC
TCTGATGATATGAAAGATGACAGCGATTTATGTAAACGCATATTTACTGAAGTCCGTTGT
GGTAAATTTCAAGAAGCAGTCTCATTATGCATAAGTGCTGGTCAAGCATGGCGAGGAGCA
GTACTACAAGGTTGGAAATTATTACATTATTTGCCCAAAGATGATCCAACTGATCCATTA
GAAATTCAAGGGAATCCTTCAAGAGACCTTTGGAAATGGTGTGCCCTAGGAATTGCTAAT
TGTGCATCTGAAAATATCTACTACAGAGCGACAATTGGTATTTTGAGTGGCCACCTGCCT
AGTGCACTTCTAGCTTGTCAAGGTAGCTGGGAAGACATTCTATGGGCTCATTTGAAAATA
CAAATAGAAGTTAGAGTTGACAAGTTTCTCCATGAACATCATTTAACTGTTGATGCTAAC
ACTACACCTTCAGATGTGCTGGACCTATTACAAGCTGAATTTCAAACAGATGAAATATCT
TTACAGCAAGTATTTAGTGCAGTAAAGTCTCTGATGGATGGAAAACGTGAATCGAACTAT
CAGTTGTGTCAGCGTTATTTAATGCTTGGTCAAGTAAGAACAATAATGTTAAATTCATTA
GAATGGCTAGAAAATGCTAATGAGAGGTTTATTCGATTTTTAGCACATCTCATATTAGTA
TTGAGACAAATGGGTAAAGATCCTCAGCATGATGTTGGTGACCAAGTCTTGGAAAAGTAT
GTGACATTACTTACCATTAGATTGGTTGATGGATCTGTGGAGTCCCCAGAGCTTATAGCA
TATTACACTTCTACAGTTCCAGCCGAAAAACAAATCATTCTGTATGCAAACTTTATGGAC
CAAATTCACAAAAGTGATTATAGGCAAGGTGTTGTAAAAGCTGGGTTGGATGCTGGAATC
GATGTTGGTGCATCAGCTCGCGTGGCTATTAAGAAAGCTATTGCAGATATACAACAAGGA
TATGGAAATGTAGAATTGAACTTCACACAGACAAGTGTTATAGAAAAGGATAAAACATTG
ATATCCAAAGTTATTTCTTCTTTAGAATGGTTGGCTTTAGTTGACAATCAGCTTGAAGAA
GCACTATGGTTGAATAATGCAATGATCAGAACATTTATATTCATTGGAAACACTGATGCT
GCCAATGCATGTCTGACTAGCTTCAACAAAATGTTTTCTAACTTTATAAACACAGTTGAT
TCAAGTACCTCTGAACTAAGAGAACATTTGTGTTTAAAAGCATACTTGGATGCTCTCGAG
GGATTTGCAACTTGGTATAGACATTTTATAAGTGGACAACCTAAAGATGTGCAGCCATTA
CCACCAGATGCAACATTTTCTGATAAAGTATATCATGAACAGCAATGTGCACAAGTTGAA
AAGAAGAAAGCAATATGGATTAATGCAGTTTCACATCAATCAAGACATACCAAAAGCTTA
CTATACAATGTTTTACTGTTTCCAGGAGGTTGGTTGCAAGATGAGAGTGATAGTACATCA
TCAGACAATTTCAACCAGGAAGAGAAAACAGAAAGATTAAAACAGTTGGACACCCTTAGA
CGACTTTGTGTGCCAGAAATTGTGATTTTATTACTAAAGATTTTACAGAGTAATGAGGAT
ATTGAGAGTCACAAGGAAGCCATTAAATTGGGCAACTTAATTGCTGCAGAAAATAGAGCT
CTATATCAAGTGTTCAACAGAAGTAAGCTGATGGAGATTTTGGAGAGGATCAAGGAGTCA
TCTCTGTTCCTTATGGAAAAAGGAACAGACATTTTAGGTTTTGAAATAAGGGAATAAAAA
TTTAAAATTGTAATATTTTATTTAATAAAAATAAATCAAGTTCAGAATAATTATATTTCT
TTACACAAATAGTATTTACAGGTATTTGAATTAAGGCACAGTGACAGGGGCCAAGTTGAT
CAAATCATTACTGCATTCAGCTAATTCTGCAATGGACACCCGTCCTCTTTGTTTGATGAA
TTTTGCAATCGATTCTAGTTCACTTTGTGAAATATAAATGAATTTTCCCCTGTCGTCAAT
GACACCAGTTAGTTCACCTGAAGCTTGCAGTTCTGTGATCCTGTCAATTGCGGCTTGAGT
TTTCAGCTTAAAATGAGCTGCTAAATCTTCCAGTAAAACTACTTTCTGGGTCTTTATATA
ACCAATGAAGTCACGCAACAAACTTTCCCGGTCCTCTTCTTCATTCTCATCAAAGCCTTC
TCCTTCAATACTAAACGCCGCCTTCATTGCTTCATATTCCTCTTGTTCACGTTTCTTACG
TTCATCCTCGGCTTTCTTTTCTGCTTCTTCACGTTTACGTTCTTCTTCCTAAGCATGACC
GGATTTAATAAAATGATTCTACTGGTGGTAGGACCTCTTCTGA
(3283 bp)

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