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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp65271_c0_seq1
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		PREDICTED:_centromere_protein_J_[Amyelois_transitella]
Ontology
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005840 C ribosome
GO:0006396 P RNA processing
GO:0016787 F hydrolase activity
GO:0030422 P production of siRNA involved in RNA interference
GO:0030529 C ribonucleoprotein complex
GO:0031053 P primary miRNA processing
GO:0031054 P pre-miRNA processing
GO:0044822 F RNA binding
GO:0070124 P mitochondrial translational initiation
GO:0070125 P mitochondrial translational elongation
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:4.44 TPM:7.75
ORF EntryO_BomoEE11653_5prime_partial:A_BomoEE_comp65271_c0_seq1
Sequence
(Nucleotide)
GTGGCTTGCTACAAAATATATTACTGTTTATCTGTTTGGTATTAAATAATTGAGCTGTAT
GCTACAATTTCATTTGCTTGTTTAATGGATGAATTAAAAGAACAGACAGAAGCCTTCAAA
ATAAAAGTTCGTTGATTTGATTTTTTGTATCTACACAGTCAATAAAACGGAGTTATTTTG
AACCAAAATTACAATGTGCTTAGAAAATAAAATAAATTAAAATTGAATAAATACTGAAGT
GAAAATGGAAGATTCATATACGGACAGCGATGTTTCTATGTCTCCTACACAAATACTGGA
ACGGTTACAAGTTCTTCGACAATTACAGTTAATGCAACGCGGAAAGCTTAAGAATCAGCG
TTTGCAGTACCAGGAATCTCCAGTAAGCTCAAACGTAACAGAAATTGTGAGCCATTTCAG
CAATAGTACTAGCTATAACACTTTCCGAAGTTTGTTGCATTCTTCTGAAGTAACTTATGA
AGAAACACCACGGCGCAACAGTGGTGATATGGCGCCCAAAGTAAAAGAAAATGATATGAT
TGAGGGAGTGACTGTTTTGAACTTATCTCAAGAATCAGAATTTATTGTGAAATCTCCAGC
TTCTACAAAAAGTTCGGATTCGCACCTGAAGGTTGATAATGTGAAATTGACACCAAATCC
TCCCTTCAGTAATAATAGTGTAAAAATACACTCTGTACAAAGCAAACAAATATCACTGGA
TGAAATGCCAATACTTTCTCCAAAAAAAGATTTTGAAGGCTTATTAATGGAAAAACTTCA
CAACAGTAAAGAAGTTCCAGATAGTAAAAGTCCAAAATCCAAAATTGTTCCAGGGATAAT
AAAAAAGCCTTTTCTGAAAAGAGGAGAAGGCACGGCTAGGTTTGGACTTAATAAAAACGA
TTTAAAAATTCAAAACACACGCTCACTGCCCTGGAGGCGTAAAAGCTTTGAGACTAAATG
TTACCAATCTCCTATAAAGCAAATTAAACAAAATAAAAGGAATGAAATTAAAAAAGTGGC
AGATAAACCACAAAGTCTGTGTCTGAAGCCGGAGATATTAGTTAAGCAAAGCAATTCTTT
AAAACCAGAAAATGTAGCACATGAAATGAAGAAAGATAGCATTAAAAGTCTTGTAGAATC
CAATATTTCTGAAATTCATACTAACAAAACAGGCTCTAACAAAATAACTGAAATACCAAA
AGAAAAACACCCCTTTGTTGCAAATAAAGGAAAGACATGGGCCTCTGTTCTAACAAATGA
ACAGAATGACTTTTTGAGGCAACTTAAGCAAAGTGAATTTTACAAGAACTTTGCTTCTCC
AACTAAAAGCTCAGTATCTGATATTAGTTGTAACGAGAGCTTAATCAATATAAGACAGCA
AAGAGAAGCAGCTGAGCAAAATATGTTTGAGCTTTTAGAGAACAAGGTCTCTCATGATAG
TTTTACATTAGAAAATTCATTTCTTAATAAATTTTTAAAACCCAAGAATCTTGATTCTTC
TGGAGAAAGTACTCCTTTGGTCGTACAAAAGTTCATAATGAACAATCCTGCTTTAAGGCA
TATATCTGCAGGCTTAAGTCTACCAGAGGTTAGTAGTACATATACAGAAATTGATGTTGA
TAGATGTAGAAGCTATGATTGTACAGAATGTTGTACTGACAATTGTTCTTCTGTATCAAC
TTGTTGCTCATGTAAAGCTACTGAGCACACTGACGATAATACCTCTTGCAAAACAACTCC
TGTACAAATAAAACAGAATCTAAAATCAAAGGAAAAAAAGGTTGACAAAGAAAAAGCAGA
TAGTTGTCATAATAATGACACTGAACATGACATAATGAAAAACAACTTAGTGGAAATGAA
TGCCAAATTAGTAAACACAAGTGAACTATTAAAAGAAAGGTTGCAGGAACTAGAAGGTGA
AATAGAAATATTTAGAAAGGAAAATTCAAATTTAGCAAAACTTAGAGAAGATATTGATTT
AGAGAGACAAAAGTTCTATCAAGAAAAAGCTGCTTTTGAACAAAAGTTTAATGAGGAGAA
AATTTTGTCTGAATATTACCTAGCTGAAGAAAAAGAAAAACTAACAAAACAAAAGCAAAT
GTATGAAAGAAACATAAGAGAAATCAGAGGCAGGTTTAGTAAAAAAGAAAAAGATGAAGT
AATCAATCTGAAAAAGGAAATAGAAAGTCTCAAAGAAGAAATAAGAGTTAAAGATGCAAA
ATCAACATCAACCATAGCTAGACTCCGAAATCAAATTAAGATCATTGAAAAAGAAAAAAA
AGACAAGGAGACAACAATAGAAAAATTGAAAAAGGAAAATAAAAGAATTCAACATAGCAA
TGATATTACAAGGCGTTTATCCAACATGAAATATTTAGCTGAAATAAATAAAAAATTAAA
AAATGTGAATCCAAAAGATATTAGATCTGAACCTGATTTAGATGATGATGCAAAGTATAA
AGATTTTGAGATAGAAAGACAAAGTAGAAATAAAACTGCTCCAATAGCCAAAAGTAATAC
AAGACAAAGAGCTAAGAGTGTACCAAACCTAAATGTGTCTTCAGCATATGCCAAATATTT
CAGTCAAAGAGATGCTCTTAGTCAAATAGAACAAAATCGGACATTGAATAAGGATAAGAT
CAATATAAGTTATTCAGATAATGATAATGATTTAGAGGAACTGGAAGATGAACAAGTATC
TGACATCCAAGACAATCCAAATGAAAAATCCAACAGTGAAGGTGTAAATAATTTAGAAAA
GATTTATTTGCAAACATTTAGATGTAACTCTCCAAAAAGCTTCAGGTCTAGTACAAGTTC
TGTTGATAGTAATTCTAATATTCAAGAAAAAAGAGACAACAATTTCATTACCAAATCCAA
TTCTTTTTCAAATTCAATAAGAACTTCTAAATCTCCAAATTCAACAACTAGGACATACCA
GAACTACAGTACAAATAGAAGTAAATCACCAGTATCTATTTTGAGCAACAGATCTCAAAC
TTCCGGTTACTCTCCTGAAAGCTGTTCAGATTTTTTTGGAATCAACGAAAATCTTAGAAC
AAAATCACCAATATCCACTATGCTCAGCAATCATTCATCGTTAAGATCAGAAACAGTTAT
TTTCAATGAAAAGAGTGCAGATGCTACAAAACAAACCAGTTCATCTAGCTTGACAAAAAC
AAATCTGAATCCAATGGAAATTAAAAGATCAGATGGATCACGGGAATTAAGGTTTCCAAA
TGGGAATGTTAAACACATATCTGCTGATGTGGTCAAGTAGAAAAAAGATATAAAGATGGT
TCCTCTGAAATACGCTTACCGAATGGCAGTATCCGATATTTCGACCCTAAGAATGAACAT
GTTCGTGAGGAGTGGAGGTTCCCTGATGGAGCTGCACTCACCATTTCTGCTAGTGGGGAA
CAACGCATCATTTTTAGTAATGGTCAAATTGAAGTGCATGCAGCAGATCATAAGCGTCGC
GAGTTTCCAGATGGTACTGTTAAGCTGGTATATCACGATGGTACTTCTGAGACTCGCTAT
GCATCAGGACGTATCAGAATAAAGGATAAACACGGAAGTTTGATTATGGACTCTGCACGG
AATTGAATTCCACACTTAGTATTATACTCTGCAACCCGTTTAGTTGTATAGGGATAGTTG
CTAAAGTGGAGATTAAAAAAAAATTTTGTAAATGTTTTGCTATTGACTATGTGATTATTT
GTAAAGTTGACTGGTGCCAATTTTGTTTGTGATGAATTATATTTATACATTCATTTAAAA
AATATGAAATTAATTTTATAAGGAAAAATATTTAATAAATGTTACTTAATTGAATTTTTA
TTTGTTTTATGCTACAAAGGTATAGTTAATTACTGGCAATCTGATAACGTTCTTGGGAGG
ACCCCTTTGGTATACCAGAAATTTTAAAATTAATAGGTTTCATGTGATCTTCGGTACCAA
ATATTCTTTTAAGAGCTTCTCTAGCAGCCATTTCTTTTGCTATTTCAATTTTTTCACCGA
AACCTTCAGATATCATTTTCTTGTTCACATAAAGGCCAATTCTGTAACAGGCAAGTAACG
TATTTTTTCCAACTTCTCCAATTAGTCGAGGTTCTACTTTACTTCCATCTTTTTCTAAGA
TGCCAGTAAGCATAGTCCAAGGGTCTTCAATGTTCCAATACTCGTTCACATCTTTACCTT
GTAACTGTGTGATAACAAAATCTCTCACAAAATGTGCTGCTCTTTCTTCACTTGTTGATT
CTAACAAAGCAGCTACAATGGCTTTAAAAGTGTTTGCTAAAATGTAATTATCAACTGGAT
ATTCTGCAGCTAGTATGATGTCCTTAGTTCCCAGACTCAAGGAGATTTTAGCCAGTCTGT
CCTCATTTGTAAGATAATTTCTCACTTCATTCACTCCCTCTAATGGAAATTTCGGTAAAA
CTGTCTCTAGGTAGAGCTGCACATATTCATTTATGAACTTTTCTCCTTCTGCAATCAACT
CCATATTGTCCTTCATAGGAATATCTACTCCCATTTCTTTTTGTTTCATTTCTTCCTTTA
TAATATAAGTTCTGTCAGTAAACGCTTGTAGTAACAAATCCGAGTCGAATTCTTCATTCA
AACGTTTTCCAAAAGCATAAAGTTCAGCCTCCAAATTCCATTCCAGAAAAGTGTTACGGG
GATTTGTTTTCTTTCCGCCTAACTTTTTTTCTCTCCTCTTTAATTCTACAAGCGTAGGAG
CTACCCATCGATGAATTTTTTGACTCTGTAAAGTCATAGGTGGTATTTTGATACACCTAG
CAAAAAGCGGAGCACATCTTCTCATTAGTGCCATTTTAATTAGTTTTTGTTTCAATGTAT
TTATTTCAATTTGAATGTTTTGTTTTTGTTGATAGGTTA
(4899 bp)

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