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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp65164_c0_seq2
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		PREDICTED:_ATP-dependent_RNA_helicase_DHX36_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000781 C chromosome, telomeric region
GO:0001047 F core promoter sequence-specific DNA binding
GO:0001503 P ossification
GO:0002151 F G-quadruplex RNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006396 P RNA processing
GO:0008026 F helicase activity
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0009615 P response to virus
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0032206 P positive regulation of telomere maintenance
GO:0032481 P positive regulation of type I interferon production
GO:0042826 F histone deacetylase binding
GO:0043330 P response to exogenous dsRNA
GO:0044212 F transcription cis-regulatory region binding
GO:0044822 F RNA binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0051880 F G-quadruplex DNA binding
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:3.43 TPM:5.97
ORF EntryO_BomoEE11548_complete:A_BomoEE_comp65164_c0_seq2
Sequence
(Nucleotide)
GTAGATTTTAACCTCCACAAGCAGTAGATTCGTCAAATAAAATCTGGTCACACTGACCTA
TACTCTAATTCACTCTATTATACATTGAGGTTGCAAGAAGTAAGCAGGATAATGAGCTCT
AATGCATAAAAAACATTTAATTTTCCACGGAATTATAAGTTAGTTTCAATAAAATTACAT
TAGTTTATTTCAAAGCGAAAAATATATACCAACACCATTTTAAACATATAAACAATACAT
ATCCCATACATTTGAAATTTGAACCCACAAAACTTATCTTACAGATATTTTTTTTAAAAT
GCCTCGGAGATATAATTCTTTTGATAGGTTTGATAGGCCACGACCACCGAAATCGGGTCT
AAGAGGCAAAGAAATTGGAATGTATTATAAAGCTTTAAGTATTGAAAAAGGAAAGAAAAA
TAAGAAAAACAATGTGATACGCTTCAAAATTCCACCAAGCATTGTCTCATCACTGTATAG
TAATTTAGCATCAATAGAAAAGCTTGCTAAAGGACTGAACATTTGCATAAAACCAATAGA
AAAATTGACTATTGCAGAAACACCAAAAGGCTTAAAACCTGAACTGTCATTACATGAAGC
GATGTACATGAACACGAGTACAGCTGAAAACAAAAACAGTGTGCAGGCAAGTGATAATGA
AAATCTATTTGAAGCAAAAACACCACTAACTGATTTTAAAAAGCTAGAAGATATTTCAAT
GATATCTGAAGATGCTGAATTACGTTCACCAAGCGATGTTGACAACAAATCAAATGGTAT
ACCTGTTTTTGGAAGTATCCAAAAAGAAATAGATGCTACTGCAATATGTTCACCAGATAA
AAAAAACAAAATTTTGGAAACTGATAATGATGTTTTAATGACCCCAGGGCCATCTAAGGA
TTTTATTTCAGTAAAGGATGAAACTGTGGAAATCAAATTAGAGAACCGTTTTTTATCACT
TAGAAGTTCAGTTAACTATAAATATGGCTACGAAGATATCATAACTGGGACGTTTGATGA
AAAATTAGATGAATGCTTGGCAAGAGGAATCAACATTAATATTAAGAATGAAGTAAATAA
TGATCTCAGTTTTGCAATGATAGAAGAATACAATGATATGTTGAGCAAAGATGGTTATAA
ATTGCACATGAAATTTCGTGACAAGCTACCTACATACCAAAAATATGAAGAGCTCTTAAA
CATGATCAACAATAATCAAGTTTTGGTCATAAGTGGAGAAACAGGATGTGGCAAATCGAC
ACAGGTACCTCAAATAATTCTTGATGATGCCATTATTAACAAAAGAGGTGCAAATGTGAA
GATTCTAGTAACTCAACCCAGGAGAATCGCAGCTTCATCATTAGCTATGAGAGTGGCTGA
AGAGAGAAATGAGAAACTAGGGAATAGTGTGGGATATGCTGTTAGATTGGAGAAGGTTGA
TCCAAGGCCTCTAGGAAGCATTATGTTTTGTACCACAGGTATACTACTGACTGAACTTGA
AGTTAATCAAAGTTTGTCTAACTATAGCCATATTATCCTCGATGAAGTGCATGAAAGGGA
CACACATATCGACTTGTCTATGTGTATGCTAAAAAAGGTACTGAATAAGCGAAAAGACTT
GAAACTAATACTTATGAGTGCCACAATAAATGCTGAACATCTCACTTCCTACTTTGGTGA
CTGTCAAAGAATCCACATTGAAGGTATAGCATATCCTGTCCAAGATGTTTATTTAGAAGA
GATATTGAAAATGACTGGATATAAGTTGCCACCCGCTGAAAACAAAAGAGCTGATAAGAG
AAAGACTTGGCAAAATCACACGAAAAAGGCTAAAGCTATGGCAGCCTCTGAAATGGAAAA
AGACATACAATATAAAGCAGAAATTGGACCATGGCTAGAAACCGTAAAAGGCAAAATCGG
TTGGGATGTATGTACTACATTACTAGATGCAAGGATCGAAGATATTAATATTGATTTAAT
TGTAGAAGTTCTTAAATTAATTAGCAGTAAAGAACCCGGCGCCGTCCTGGTGTTTCTACC
CGGAATCGGTGATATAACCAAGCTCATGTCCGTGATGGAGCAGAGTTGTGAATTTCCGAA
ATCGAAATTCGACGTATATCCTCTACATTCGCGACTACCTTCTTTGGAACAACACAAGAT
TTTCCAAAGACCACCGACCGGTATCCGAAAAATCATAATAGCTACGAATATCGCGGAAAC
ATCAATTACAATCGATGATATTGTATACGTAATCGATTGCGGTAAGATTAAATACAGCGG
ACTAAGCATTGCGGACAACATATCGACATTGAAAACTGAGTGGATATCTCAGGCCAATTT
GCGACAAAGACGAGGCCGCGCCGGGCGATGCCAACCCGGCGTCTGTTATCACTTAGTTAC
ATCGTTCCGAGCTGGGAAACTCGAACCGAGCCTAAAGCCTGAGATGCAGAGGAGTGACCT
ACTCGAGCCCGTGCTTGCCATAAAACGGCTTCGACTCGGAAAAGCTGCTGATGCTTTAAA
GGATATGGCGGCTCCACCGGCAGAAGAAACTATTAAAGCTGCCGTTAAACATTTACAACA
ATGTGGAGCCCTCAATGAATCAGAAATCTTAACACCTCTTGGTTGGCATTTGGCACGACT
ACCAGTTCACCCTGCGGCTGGTAAATTATTGCTGTTGGGAGCGCTGTTCGGTTGTTTGGA
CCGAGCCGCCAGCGTTGCCGCCGTTTGGGGCTTCAAAGACCCTTTTCAGTTAGTTATTGG
AAAAGAAAAACAAATGGACCTAGCAAAAAAGGAATTAGCCCTAGGTGAGCCAAGTGACCA
CGTTGCGATATCCGAGGCAATTATACAATGGGAACAATGCCCCAGGCAACATCGTAATAA
TTTCGCATACAAAAACTTCCTTTCCATGAATACTCTGAAATTACTCTCTGAAATGAAGCA
TCAGCTGGCCGACAATTTGAGGCAGATGGGCTTTTTGAATACTGGCAACATCAAATCGGC
TTGGGAAAATAGAAATGCTAATAATCTAAGCCTTTTTAAAGCTATAGTCGCTGCAGCGCT
ATACCCCAATATTGGTTCTGTGAGGTGGACGAATCTTCATAACCGAAATCCACGTAAGAC
TCCCCGCATCAAGGTTTGGACTCCGGAAGACGGCTCGATCGCGCTGCACCCCAGCAGCGT
CATGGCGAACAAACACAACGGCGGCCTCAACGCTCAGCCGATGTGTGCGAGCCCGGGCGC
TAACTGGCTGGTGTACTGGTTGAAGCGGCGCTCGACCGATTTGTTCTTGTTTGACGTCAC
TCTGGTCTATACTCTGCCTCTGTTGTTTTTCGGTGAACTTCACGTGTCTCCAGCTGAAGA
CCCAGATGACTGTATCATATCGATAGAAAAGATATCTGTTTGTTGCAAGAAGGAAACTAC
ACAATTGCTGTTTGAAATGCGGTCGTTATTAGACCACGTTTTAGCCGACAAGATCATGGC
GTCTTCCGAACACTCCGTAAAAAATAATGCCTTTGAAGAACAGGTTCTGAATGCAGTGAT
AAAGCTTATTACAGCAGAGGACGAGGGCGCTGAATATTTGAACAGCGACGACGACAATTC
CGAATCTGATCATTCAGAATACGAAACGAGCAGGAGGTGGTACCGTTAAGCTCCCTCGGT
ACCCATTGTACACCAACCTAACGTTTGTCGCCTCCCTCACGTGGACTACACTAAATATGG
GCGTGAGCGAAAATGTGAGCTCATCATTAACATGAAAAGTAGTTTAAAAACGATTTCCAC
GTCGATTTTCGTTAAAATCGATTTTTATGACGTATGTAGGTAAAGGAAGCACTTGGTGGT
AGTCAGTACCTTGCGATGCCATCCATGATCGAACACTGGAGGAACGTCACATGTGGTTGC
GAACCTCAGCAGTGAGGGAACGAAAGGCAGACGAACATATACGGCTTA
(3948 bp)

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