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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp65145_c0_seq2
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_uncharacterized_protein_LOC105391721_[Plutella_xylostella]
Ontology
GO:0000014 F single-stranded DNA endodeoxyribonuclease activity
GO:0000110 C nucleotide-excision repair factor 1 complex
GO:0000712 P resolution of meiotic recombination intermediates
GO:0000724 P double-strand break repair via homologous recombination
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003697 F single-stranded DNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006259 P DNA metabolic process
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006296 P nucleotide-excision repair, DNA incision, 5'-to lesion
GO:0006298 P mismatch repair
GO:0006302 P double-strand break repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0007095 P mitotic G2 DNA damage checkpoint signaling
GO:0007131 P reciprocal meiotic recombination
GO:0007143 P female meiotic nuclear division
GO:0016321 P female meiosis chromosome segregation
GO:0016787 F hydrolase activity
GO:0043234 C protein-containing complex
GO:0045132 P meiotic chromosome segregation
GO:0046982 F protein heterodimerization activity
GO:0051321 P meiotic cell cycle
GO:1901255 P nucleotide-excision repair involved in interstrand cross-link repair
Transcript
Level		FPKM:1.12 TPM:1.95
ORF EntryO_BomoEE11505_complete:A_BomoEE_comp65145_c0_seq2
Sequence
(Nucleotide)
CCGAAAATAAAAAAAGGGAGGCTAAATTCACTGAGCCCATATACTTCACTGGTATATACC
CGTACCATACCTATATTATGTATATATGTACTTATTACCTAAGTAAATATTATTCATTTG
ATTTGCCTACCTACTTTAACCAATATGAATGCAAAAATTCAGGAAGATGAAAATGTAGAA
AACACTGTTTCGAATCTAAAGAATAAGTTTCCCATGTTGTCATTCGAAAAGCAAATCTTC
ATTGATGTGTTTGAAAAAGATGCTCTTGTAATAATGGCAAAAGGCCATAATTACAACAAC
ATTGTGGCTAATTTGTTGTGGGTGCACAAGGATCCTGGTAATCTAGTTTTAGTTATAAAC
AGTAATGATAATGAAGAAAAATATTTTACTGAAAAAAATCAATTGACACCAGTACCCACA
CTTGGCAATGAAAGAGAGCGGTCGTATTTAGAGGGTGGAATTCATTTTGTATCAACTCGT
ATTTTGGTTGTGGATTTATTAAAAAACAGAGTGCCAATATCCCATATCACAGGCATTGTT
GTTCTAAGAGCACACACAGTCTTAGAATCATGTCAGGAAGCATTTGCATTGAGGTTGTAC
AGGCAGAAAAATAAGACTGGATTTATTAAAGCATTTTCTAATTCACCTATCTCTTTCACG
TTTGGATACCATCAAGTTGAGAAAGTTATGAGGGCGCTTTTTGTGACAGAACTATTTCTG
TGGCCAAGGTTTCATGGCAACATTATTAGAAATTTAAAGAGTAGACAAGCTCAAGCTGAA
GAACTTCACATTCCATTAACTACTAACATGAGCTACATTCAGACGTGTCTTCTTGACATT
ATGAACTACACTGTCAAACAATTGAAGAGCATTAACAGGTCTTTAGATATGAAAGAAATC
ACAACCGAGAATTGTATAACAAAGAAATTTCATAAGATCCTGCAATCGCAGCTGGATTGT
GTGTGGCATCAACTTAGTACAAGAACAAAGGAATACATACAAGACCTAAAAATTCTCAGG
AGCATGATTATTAACCTAATACACGATGACGCGGTGTCGTTATACGCGTTAGTCAGCAAG
TACCGAACTCCTGAATACGCACAAATAAATTCTGGTTGGATCCTGCTCGAGTCTGCGGAG
CAGCTGTTTAAATACGCCAAAGCACGTGTATTTAATAAAAAGAACGAATTCGATCCGGAG
CCTTCACCGAAATGGAAGTACTTAAGCGATTTGTTATCCCAAGAAATACCAGACGAAGTA
AACAAAAAGAAAGACAGTAACTTGAGCAACACTAAAATATTAATTCTCTGCCAAGACAAT
CGGACCTGTAGCCAGCTGAACCACTTCCTCACCATGGGGGCAAATAGATACCTGCTGTAC
ACGGCTTTCAAACGTGAGATCCCCATAAATGCAGTAGCGACAAAATACGAAGACATAAAA
AACACAGTTCCCGTAGAAACTAAAGATAAGACAGACAAAAAGTCGGATACAAAAGAAGGA
AAATCTACCGATGAAGGCACACGTTTGGATGACTCGAAATATGAAGAATTGAACACAGAA
GAATCGAGAACTAATTATCTGTTGACGCTAACACAAAGTTCAGCGCACTGCAGCAAAGAT
AATGCAACAGTTAATGAAAGTTTATTCGAACCCATTTCCCAGGTCATGGTAGTTCCTTCA
TATCAAGACGGAAAAACAGATGAATACTTCCAATTAACAAACGAGGAAGAAGTGCAACCC
ACCGATTCAAGGAAAGCAGGTCAAAATCAAAGTAAAGAGAAACCGCTAGTGATAGTGGAC
ATGAGAGAGTTTCGATCAGACTTACCGTCGCTGTTGCACAAGAGAGGCATTAATATCGAA
CCAGTTACGATAGCGATAGGTGATTACATACTGACCCCTGATATTTGCGTAGAAAGGAAA
TCTATATCCGATTTGATTGGATCGTTGAACTCTGGTCGCTTGTACACACAATGCACACAA
ATGTGCCGCAACTACAGTCGACCTATCCTGCTTATTGAATTTGATCAAAATAAACCTTTT
AATCTTCAGGGTCATTTCGTGGTATCAACAGATATATCTGGAGCGGATATACAACAAAAA
CTACAACTTCTGACAATACATTTCCCTAGGCTGAAATTGGTATGGTCGCCAAGTCCGTAT
GCTACTGCTGAACTTTTCTATGAATTAAAGCAAGGCAGAAATAATCCCAATATTGCAGAA
GCTATCGCTCTCAGTGGTGAAAATACCGCAGATGATATGAACTATGAGAGATACAATATA
TTGGTTCATGATTTCGTACAAAAACTACCTGGTGTTACATCAAAAAACATTAACAGAATT
ATGAACAAAGGTATCTCACTGGACCACTTGATAACTCTTACCAAAGAGGAATTATCTGAT
GTCGTAGAAAACAAAAATGAAGCCGAAACACTGTATTCAATACTTCACGTCAAAGCTCGT
CCCATGGATGCCAAAGAAGAGAAATTCGGAAAGAAAAAGTTCACTGGAAAACTATATCGT
AGTAAAAAATAATGTACATATTAGATGTTATTACATAGTAATTTATTAAAACTTAATTAT
GAATCATTAATAAATTAATGTTACCAATTTACAAAATAATAAATCATTTTTTAAATAAAG
ACTAATAATTTTTTCATGATGTAAGAATATCGTCATGTAGAATATTATTTTATGATGTGA
CAAATATTTATCGCCAAGGACGATATTGGTGCTCCTTGTCAGTTAATGGAACATAAATCA
CACTCATTAATTTCTTTACAGTTGTTGTTCCATCCTGTGCTTTATCAACCTGAGTCAAAT
GTTGTTCACCACCCTCAGGCCCTACAGGAACTATTAGCCTCCCTCCCGGTTTCAATTGAT
CAATTAGAGCTTGTGGTAATGTGGGTGCTGCAGCCCCGACATGAATTGCACTGTAAGGGG
CTTCAGATGGATAACCGAGACGACCATCACCAACTACAAGTTTAATCCTCTCAGATGAGA
GTAAGCTTGGGTTGTCATTTTGGATGTTTTTGGTTGCCAAATTCACAAGTTCTGATATAT
GTTCTATCCCAACTACCCGGCCAGTTTCTCCTAACATCATGGCCATACAGGCAGTGAGGT
AACCAGACCCCGAACCAACATCTAAAGCTTTTTCTCCTGGTACTAGCTGGTTTTTTAACT
TTTCTAATGCATGAGCATGCATGTGGGGAGCGCTGATTGTTGCAGAGAATCCAATAGATT
GAGGAGAGTCCTGGTATGGAGAAGAAGGACAGTAATTTTTCCGATCAACAGCTAGCATTG
CATTTGCGACGGTGTCCGATTTTATTATGCCGTTAGTTCTTAAATTACGTATTAGGTCCA
CATTATTTGCTCCGTGGCTTCTCCATGCCATTATTATTGGAATTATTACAATAACTGCTA
AACAAATGTTTTTAATCCATGTATATTTATTTTTCATTAATGTTTAAATTATTCCTTCTT
TATTGGTGGTAGTAAATATTCGGATTTCTGTGTAATATCTGTAAATG
(3527 bp)

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