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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp65101_c0_seq3
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		PREDICTED:_AT-rich_interactive_domain-containing_protein_4B_[Bombyx_mori]
Ontology
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0004407 F histone deacetylase activity
GO:0005515 F protein binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006349 P regulation of gene expression by genomic imprinting
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007283 P spermatogenesis
GO:0008150 P biological_process
GO:0016575 P histone deacetylation
GO:0034773 P histone H4-K20 trimethylation
GO:0036124 P histone H3-K9 trimethylation
GO:0044212 F transcription cis-regulatory region binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0097368 P establishment of Sertoli cell barrier
Transcript
Level		FPKM:0.68 TPM:1.18
ORF EntryO_BomoEE11459_5prime_partial:A_BomoEE_comp65101_c0_seq3
Sequence
(Nucleotide)
TCTTTCTCTTTCTCTTTATCTTTCACTTTTTCTTTTTCTTTCCTATCTTCTTTCTCTTTC
TCTATCTCTTTCTCCTTTTCTTTTTCTCTTTCTTTCTCTTTCTCTTTCTCCTTTTCCTTT
TCTTTCTCCTTCTCTTTTTCTCTTTCCTTTTCTTTCTCTTTTTCTCTCTCTTTTTCCTTT
TCTTTCTCTTTATCCTTTTCTTTTTCCTTCTCTTTATCTTTTTCTTTATCCTTTTCGATC
TTTGGAGCCACGGCAACTACGAGCGGTTGATTGTCGGCGCTGTCCTCTTCGTCGCTGGCC
CGAGGTTTTTCTTTCGTTTTCTCTGTTTTTTCTTCTTTCTCGCTCTTTTCACTTTTGTCC
GTCTCGCTCTTGTCAGAATCTTTGTCTTTTCCGCGCTGACTGGGAGTGCCTGTCGGTGTG
CTTGAAGCGGAGGACGAAGTGAGGGGCTGCTTATCTTTGTCTCGTATGAGAGATCTACCG
GCGGGCGGAGTGCGTGCGCCGCGCGGGTGCGCCACTAACGTCACTCCCAGCTTTCGGTAG
AAATCTTCGAAGCTGTGCAGGAATTTTTTATATGCCTGTTTGCAGAGATTCGTTATACTA
TTCGTCACCGGATGAAAGCCCATTTTGTCAGCAATAGTTTTCCATTGATTTTGATTAGTG
ACCCTGTTGTAGCCTCCTAGTTTTTGAACGACCCGAAATAGTCTATATAAATCAATATCT
TTGTTGGCTATAGTCGGATTCCGATTGAGCGGTGTGCCACGGTCATCCATAAACTTATAC
AGTTGAGCCACGAAATGATCTTTTTCTTCTCTTGGTTCATCATCGGAACTATCATCAGAA
GTATTTCGGGGTTCGTTGAAGAGCGTGTCTCGATCCCAGTGCGGAGGTAGCACACCTTGG
TTCAAATATTGCAGAGCGGCTTCAACTCCTGCCCATTCCAGCGGTGCGCTGCCCTTACGG
AACTCGCGTGCTTCTTTTTTGGGTACTGTGTAATATCGTCCATCTTTGAAGGAGCGTACT
AAATAATCCTCCTTGACCTTGATCTGTGCCGTGGGCGCCACGACCAGCGCTGGGAAGGCG
GGCTGGTGCGGTCGGCGCCTCTCCGCGCCACTGGCCGCCTCCACGAGCACCACGCGACCC
ACGTGCGGTTCGCGCTCGGCACTGTCCGCCTTCACGGGACGACTCGTACCTTCGCCTTCA
CTATCATCTGACTGGGCGCGTCCTCTTCTGCCACGTCGTCCTGCTATGACTGGGGTAGAA
AAGTGTTCAGGGTGTGTCAATGGCAATTGATCTAAAGTCTCGCTTTCATTGAAATGCCTT
CCACTCTTCAGGCAAAGCGCTGATCGCCTCAATGTTGTGATGTCACCATCATCAAACACA
ACAGTATATTGACTGCAATCCTGTATTTTAGTAATGACAGCTTCCATTGCATCTTTTTTC
GGATCCTGTTTCACTTCTACAGTACTTCCAATCCTCAATGTACCTTTTATTACATCATCA
TTCACAGTAATTGTTCCTCCACCAGCTTTAAGTGTAACTTTGCATTTAATATTCCTTACA
ACTTTTTTTATTTTAGCCTCACAGAATGCACCCTTGTATTTTGCACTAACATCAGTCCCC
ACTGGCAAGTAGGGTGGATCATCACCCTGCATTGCGATTAATAGAACCAGTAGATAGACT
TTAATGAATTTATAGTTTCAGTAAACCACAATCCAACTGGATATTTTACCAGTGGTAACC
TCACTACCTTCTGGTAATTTTTGTATTACAATAATATTATTGTTTATTTATATGTTATCT
TTGTGTAAAGATAAGTAAAACTTTTTTTGCTCGAGTGTTTTTATCACGATTTCTAGTACA
TATTTATTTAAATGTAATGTCGCTTAATTCAAATTTTTGTACCAAAAGGATTACTTTTAC
ATTACCAGTATAGTCGTGGTTTATGTAGACAAAGCACTTAAGACAGTTGTGAATCAAAGT
TTAAGATTTATTATCATGTAATTTGTTCATTACTGTTATTTACAATGTGTATCATATTTC
CTTTTTAATCAAAATTTGTTAGGCACGTAAACGTAAACATAATGAAATCTCATTCCAATC
CAATGTTTAGTTGTGTATAAGCTATGGTTTAGTTTATATTCATAGATATTTAGTTTAAAC
TCATACACTTTATTATCTATGATCCCTCAACTAACGGCGAATTTACATTACGAAAT
(2216 bp)

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