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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp65095_c0_seq1
Scaffold_idBomo_Scaf474
NCBI non-redundant
(nr)		PREDICTED:_probable_ATP-dependent_RNA_helicase_DDX28_[Plutella_xylostella]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0010501 P RNA secondary structure unwinding
GO:0016787 F hydrolase activity
GO:0019843 F rRNA binding
GO:0035770 C ribonucleoprotein granule
GO:0042254 P ribosome biogenesis
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
GO:1902775 P mitochondrial large ribosomal subunit assembly
Transcript
Level		FPKM:19.87 TPM:34.66
ORF EntryO_BomoEE11450_complete:A_BomoEE_comp65095_c0_seq1
Sequence
(Nucleotide)
GTCATAAAATCCCTTAAAAAAATATTTGTTACGATATGTGACATTATGTGACATAACCTT
AAAATAACAAACAATGTTAGTATTTTTAAATTTTAATTAAATTTATCAAATAACAGGAAC
AATAACAGATAGGAACAATGTCTAAATTACGTCAATTAATTAGCACATCTTATAGTCGTT
ATTATAGCCTCCAGCAGGCTAAGAAAAAATTACCTATTATAACATGCAAGCGACCGGAAT
TCAATCACTACGAAGGACAGAGTTATAGCAAGTATGAAGGTATAAAACTAGCTTCGCAGG
GGTGGCTACACAATAAATCAAAGGGAGACTATTTCATCATACACGGGAATGCAAATAAAA
AAGAAGAAACACCCGTGTATAGGAAGACTTTTGAAGATATCGGCTTGAAAGATAATTTGG
TTAAAGTTGTCAAAGATTTAGGGTTTACGCTGCCCACGGCCATACAAACAAAGGCTGTAC
CCGCCATTCTCAATGGACACAATACGGTAATCACAGCGGAGACGGGCTGCGGGAAGACCT
TAGCGTATTTGTTACCTATAATTCAACATATACTGGAATGGAAGCCAAGTATTCAAGAAG
AATTTAATAGTCCATTGGCTGTTGTTATTACACCGAACAGAGAACTAGCTCTACAAATAG
GAGAAGTGGCTCAAACAATAGCACAAAGCATAAACATAAATGTCACGACTTTAATAGGAG
GCAAAACGAAAAAAAAAATGTTAAACCCTCCAATTGAGCACAGTGACATATTAATCACAA
CGCTCGGAGCTTACAGTAAACTAGTCACAACTGGAATATACAAGATTCACAATGTGCATC
ATATTGTGCTGGATGAAGCAGATTCCCTTTTGGATGACACATTTATTGATAAAGTCACAT
ATCTGTTGAAGAAATTTTCGATACAATATAAAGTTGATATTCAAGTCCCTCCCACAGGTT
GTCAGTTGACTTTAGTTAGTGCAACACTACCTAGGGACCTTCCGGAAACTGTCAATAGTT
TTGTAGCGGCTGAATCACTGAAAATGGTTAGAACTTCAAATATACATCGGATATTACCAC
ATGTGCCGCAGAAATTCTTACGTCTCGGGAAGGCGCACAAGCCCGCGGAACTCCTCAAAC
TTGTCCAAGCGGATCAGAACGAGAGGAGACCGGTCATGATCTTCAGCAATCAGACGTCTG
GCTGCGACTTCGTGTCCATGTTCCTGAACGAGAACAACGTTGAATGCATCAACATCAACG
GCCAGATGCCGGTACAGCTGAAGTTGGGGAAGTTTGAAATGTTCAGATCCGGGAAAGTTA
ATGTCATTTCGTGTACTGATATCGTTTCCCGAGGATTGGACACTACTAGGACGCACCACG
TAATTAATTACGATTTCCCTCTGCACACGTCTGACTACATCCACCGGTGCGGGCGCGCGG
GCCGGCTGGGCTCCCCGCCCGGATCCCACGTCACAAGCTTCGTGGCCTGGCCCCGCGAAG
TCGAGCTGGTCCAGAAGATCGAGACCTCGGTCAGGACAAACTCTGACCTGCCCCACGTTA
ACGCCAACATCAAGCGGGTCATACGAGACAGGATTGTCAGGATGAGCGGGGCTCTTGCTA
GGGCAAGTTGAGGAGGAGTCGGTGTTGCCAGCCGCCGTCGGTGTAAAAAAAATGTAAACT
TATAAACGCTTCACTTTCCCCCCTTAGCCTGTCGTGAGTTCTGTCTCAAGCGAGGTTCGG
ACTTCGGTTGTTGAGCAAAAAAAAGTGGATCGGATCGAGATTTAAGCATTTTCAAAACAC
AATTAGTTACATTTAATTCTATAGAAGCATTGCCAATTATAAAAAAAATGTCCTAGAAAA
AGCTTGAATGACTTTGAGCTAATCACACATTGAAACCGAATGTCGTTCGGACATAATTGA
TTGTCAGGTGACTCAGCTATGTAAATTTCACGGATATACAGATAAGCCTTCTATAACACG
GTAGATACGTTCCTACAAAGTCCCGTGTTGGGCGAAACCGCGTTATATGAGACTAGAAGT
CAGTACAAAAAAGAGAGTAATTTTTCTGAATAAAACATCTCAACTATGCCTGTATGTATT
TTTATTATACATAAAAAAACAAGCAGTTAAATTTCTATTATTCCTTTAAATTGTGTGTCC
ATAGTGCATAATGTAGTTTTCTAAATCATTTTAAAAGAAAATCTCGTTAACGTGTTGTAG
AAGTACCGTGTTATAGGCTACCTGTATATTTAAATTACGATTTACTATGTATATGTAAAC
ATTTATAAACTATTGAAATAAAGACTATTACAGTTAAAAAAAAAAAAAA
(2329 bp)

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