SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoEE_comp64967_c0_seq1
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		PREDICTED:_non-structural_maintenance_of_chromosomes_element_1_homolog_[Amyelois_transitella]
Ontology
GO:0000724 P double-strand break repair via homologous recombination
GO:0000781 C chromosome, telomeric region
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006301 P postreplication repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030915 C Smc5-Smc6 complex
GO:0035556 P intracellular signal transduction
GO:0046872 F metal ion binding
GO:2001022 P positive regulation of response to DNA damage stimulus
Transcript
Level		FPKM:15.37 TPM:26.81
ORF EntryO_BomoEE11311_complete:A_BomoEE_comp64967_c0_seq1
Sequence
(Nucleotide)
GATCATAAACCCAGTGACCATTGACAGGTAGAAAAAATCGACACTGACAGAGACAACGTT
AAAATCATAGTGTCAAATTGTCAAACAAAATATTAATTTAGGACGTTCAAAATTTAAACC
GCTTCGAAACTTTATAAATAAACACAAACTAAAAATTTTTAACCAGCCATGTCTTACAGT
AAAGTTCACAGATATTTTTTAAGAACTATAGCCAGTAGCGGTGTTATGAGTGTTGATGAA
GCTCATCGAGTCCTGACTAAATTTACAGGTGAGCCGATCTTGTTAAAGAACTGCATTCAA
GAAATTAATGATGTTATCAGACCATATCAGCAGTCAATCAAAGTAACATACAATGAAAGT
ACAAATGAAGAAGTAGTTATATTCTTAACCCATGCTTGGGATTCAATATCTGAATCCCAA
AAGATCTTCACAGCTAAGGAATTAGACTATTTCAGATTATTAATTGAAGAAATAATGAGT
ATAGATGTAAGAGAAATCACAGGCATTCATGCAATTAATTTGGTTAATAAAATGGGCCAG
AAAATATCAATGCTCCAAGCTGAAAATTTATTGGCTAAATGGTGTAAAATGTACTACTTA
GAGAAGATACAAAATAAATACCGCTTAGGTGTGAGAACCATAAATGAATTTGAAGATTAT
TTTGAGAAATACATGCCTGATGTAATGAAAGATTGTTACATTTGTAAGAAAAATGTTTTT
TGGGGGGCTAACTGCATAGCATGTGAAAAAGCTATTCACACTAGGTGCCTTAATCAGTAC
TTAGAAAAAATAAAAAAATGGCCTTGTTGTAAACTCGACTTCAGTCCAGATCAACTGAAA
CAACTTAACGAAAGCCAGAGAATGACTCAGATAACTCAAACCTTTGAAGACACACAGTCA
ATTGAAGAAAGGTCGGAGAATTCAACAGCTTCCAATGTAGAAAATGATAATACAGAAGAA
ATGGAAAGAAGTCAAAATACAGATAACATACGACGTCTCTCTAGAAAGAGGAAGAGAGAA
TAAATTTATGGTACAAAATGTATTTTTATGTAGTTGTAGTTTTGAGTTTTGTATGTGGAA
ACTTAGAACAAATATATATTTTTAATTTGCCCTTATGTATGTATTTACAAGCAACGTTAT
TTGGCTGGCATAAATAGTACGTAGTTCTTTAATACAAAATGTAGCTACGCAATTGATCTA
CACGAGTAATGAAGTTCGGTCAGAATTCTTTTCTAAAACAGACCAGTATTTCAAATCGTG
TCAGTGTATCTACTTATTTTCTCTATTCTGTATTTTTTTCTCAAATAAAATTCATCAATT
GAACATTTTATATTTTTTAGAATCGAAAATTTTAATTTTACTTGAATGTTTCATAAAGAT
TTAAAACAACAAAACATTTATTCAACTGTTTCTTGTTAAAACTAAATAGCTAAAAACATA
TTCTCAACTTTCTTCTGGACGATTTTCGCGGATTTCGGATAAAAATCCAACAAATATTTC
CATTGTTCCAATTTCAAGTATACAATATCGACGACGGTGCGCGCTCGAAACGAGAAATGA
TGTAAGACTCCAACGTATAAACCCTGTAAAGAACATATCGACGCTTGAAAGGC
(1613 bp)

- SilkBase 1999-2023 -